Coordinate-aware organelle record

Scutellaria tuberifera chloroplast genome

Available NC_059812.1 152,332 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	385	1444	1059
trnK-UUU	gene	translation-rna	−	1676	4264	2588
matK	gene	other	−	1971	3507	1536
rps16	gene	ribosomal-protein	−	5159	6327	1168
trnQ-UUG	gene	translation-rna	−	7473	7545	72
psbK	gene	photosystem-ii	+	7869	8055	186
psbI	gene	photosystem-ii	+	8445	8556	111
trnS-GCU	gene	translation-rna	−	8676	8764	88
trnG-UCC	gene	translation-rna	+	9451	10212	761
trnR-UCU	gene	translation-rna	+	10386	10458	72
atpA	gene	atp-synthase	−	10554	12078	1524
atpF	gene	atp-synthase	−	12152	13380	1228
atpH	gene	atp-synthase	−	13741	13987	246
atpI	gene	atp-synthase	−	14983	15727	744
rps2	gene	ribosomal-protein	−	16075	16786	711
rpoC2	gene	rna-polymerase	−	17002	21208	4206
rpoC1	gene	rna-polymerase	−	21362	24198	2836
rpoB	gene	rna-polymerase	−	24224	27437	3213
trnC-GCA	gene	translation-rna	+	28598	28669	71
petN	gene	cytochrome	+	29371	29461	90
psbM	gene	photosystem-ii	−	30541	30646	105
trnD-GUC	gene	translation-rna	−	31170	31244	74
trnY-GUA	gene	translation-rna	−	31357	31441	84
trnT-GGU	gene	translation-rna	+	32155	32227	72
psbD	gene	photosystem-ii	+	33537	34599	1062
psbC	gene	photosystem-ii	+	34546	35968	1422
trnS-UGA	gene	translation-rna	−	36211	36303	92
psbZ	gene	photosystem-ii	+	36623	36812	189
trnG-GCC	gene	translation-rna	+	37083	37154	71
trnfM-CAU	gene	translation-rna	−	37298	37372	74
rps14	gene	ribosomal-protein	−	37521	37824	303
psaB	gene	photosystem-i	−	37951	40156	2205
psaA	gene	photosystem-i	−	40181	42434	2253
ycf3	gene	other	−	43107	45030	1923
trnS-GGA	gene	translation-rna	+	45906	45993	87
rps4	gene	ribosomal-protein	−	46278	46884	606
trnT-UGU	gene	translation-rna	−	47225	47298	73
trnL-UAA	gene	translation-rna	+	47984	48553	569
trnF-GAA	gene	translation-rna	+	48859	48932	73
ndhJ	gene	nad-dehydrogenase	−	49580	50057	477
ndhK	gene	nad-dehydrogenase	−	50156	50834	678
ndhC	gene	nad-dehydrogenase	−	50886	51249	363
trnV-UAC	gene	translation-rna	−	52245	52898	653
trnM-CAU	gene	translation-rna	+	53079	53152	73
atpE	gene	atp-synthase	−	53361	53763	402
atpB	gene	atp-synthase	−	53759	55247	1488
rbcL	gene	other	+	56018	57461	1443
accD	gene	other	+	58171	59638	1467
psaI	gene	photosystem-i	+	60370	60481	111
ycf4	gene	other	+	60914	61469	555
cemA	gene	other	+	62151	62751	600
petA	gene	cytochrome	+	62957	63920	963
psbJ	gene	photosystem-ii	−	64684	64807	123
psbL	gene	photosystem-ii	−	64940	65057	117
psbF	gene	photosystem-ii	−	65080	65200	120
psbE	gene	photosystem-ii	−	65214	65466	252
petL	gene	cytochrome	+	66373	66469	96
petG	gene	cytochrome	+	66643	66757	114
trnW-CCA	gene	translation-rna	−	66875	66949	74
trnP-UGG	gene	translation-rna	−	67118	67192	74
psaJ	gene	photosystem-i	+	67463	67598	135
rpl33	gene	ribosomal-protein	+	68069	68270	201
rps18	gene	ribosomal-protein	+	68444	68750	306
rpl20	gene	ribosomal-protein	−	68987	69374	387
rps12	gene	ribosomal-protein	−	70156	98293	28137
rps12	gene	ribosomal-protein	+	70156	139098	68942
clpP	gene	other	−	70424	72357	1933
psbB	gene	photosystem-ii	+	72819	74346	1527
psbT	gene	photosystem-ii	+	74537	74639	102
psbN	gene	photosystem-ii	−	74712	74844	132
psbH	gene	photosystem-ii	+	74947	75169	222
petB	gene	cytochrome	+	75293	76660	1367
petD	gene	cytochrome	+	76848	78055	1207
rpoA	gene	rna-polymerase	−	78217	79231	1014
rps11	gene	ribosomal-protein	−	79302	79719	417
rpl36	gene	ribosomal-protein	−	79820	79934	114
infA	gene	other	−	80029	80263	234
rps8	gene	ribosomal-protein	−	80382	80793	411
rpl14	gene	ribosomal-protein	−	80958	81327	369
rpl16	gene	ribosomal-protein	−	81453	82697	1244
rps3	gene	ribosomal-protein	−	82851	83514	663
rpl22	gene	ribosomal-protein	−	83515	83971	456
rps19	gene	ribosomal-protein	−	84030	84309	279
rpl2	gene	ribosomal-protein	−	84364	85847	1483
rpl23	gene	ribosomal-protein	−	85865	86147	282
trnI-CAU	gene	translation-rna	−	86306	86380	74
ycf2	gene	other	+	86468	93278	6810
ycf15	gene	other	+	93419	93617	198
trnL-CAA	gene	translation-rna	−	93872	93953	81
ndhB	gene	nad-dehydrogenase	−	94495	96707	2212
rps7	gene	ribosomal-protein	−	96981	97449	468
trnV-GAC	gene	translation-rna	+	99870	99942	72
rrn16S	gene	ribosomal-rna	+	100169	101660	1491
trnI-GAU	gene	translation-rna	+	101958	102979	1021
trnA-UGC	gene	translation-rna	+	103043	103930	887
rrn23S	gene	ribosomal-rna	+	104099	106912	2813
rrn4.5S	gene	ribosomal-rna	+	107010	107113	103
rrn5S	gene	ribosomal-rna	+	107360	107481	121
trnR-ACG	gene	translation-rna	+	107715	107789	74
trnN-GUU	gene	translation-rna	−	108335	108407	72
ycf1	gene	other	+	108736	109519	783
ndhF	gene	nad-dehydrogenase	−	109483	111724	2241
rpl32	gene	ribosomal-protein	+	112240	112417	177
trnL-UAG	gene	translation-rna	+	112859	112939	80
ccsA	gene	other	+	113039	114014	975
psaC	gene	photosystem-i	−	115868	116114	246
ndhE	gene	nad-dehydrogenase	−	116370	116676	306
ndhG	gene	nad-dehydrogenase	−	116906	117437	531
ndhI	gene	nad-dehydrogenase	−	117801	118302	501
ndhA	gene	nad-dehydrogenase	−	118382	120482	2100
ndhH	gene	nad-dehydrogenase	−	120483	121665	1182
rps15	gene	ribosomal-protein	−	121767	122040	273
ycf1	gene	other	−	122314	127864	5550
trnN-GUU	gene	translation-rna	+	128193	128265	72
trnR-ACG	gene	translation-rna	−	128811	128885	74
rrn5S	gene	ribosomal-rna	−	129119	129240	121
rrn4.5S	gene	ribosomal-rna	−	129487	129590	103
rrn23S	gene	ribosomal-rna	−	129688	132501	2813
trnA-UGC	gene	translation-rna	−	132670	133557	887
trnI-GAU	gene	translation-rna	−	133621	134642	1021
rrn16S	gene	ribosomal-rna	−	134940	136431	1491
trnV-GAC	gene	translation-rna	−	136658	136730	72
rps7	gene	ribosomal-protein	+	139151	139619	468
ndhB	gene	nad-dehydrogenase	+	139893	142105	2212
trnL-CAA	gene	translation-rna	+	142647	142728	81
ycf15	gene	other	−	142983	143181	198
ycf2	gene	other	−	143322	150132	6810
trnI-CAU	gene	translation-rna	+	150220	150294	74
rpl23	gene	ribosomal-protein	+	150453	150735	282
rpl2	gene	ribosomal-protein	+	150753	152236	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_059812.1DNA · accDNC_059812DNA · atpBNC_059812DNA · matKNC_059812DNA · ndhFNC_059812DNA · psbANC_059812DNA · rbcLNC_059812DNA · rps12NC_059812DNA · ycf1NC_059812