Coordinate-aware organelle record

Stachys geobombycis chloroplast genome

Available NC_082543.1 150,566 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	403	1462	1059
trnK-UUU	gene	translation-rna	−	1694	4277	2583
matK	gene	other	−	1995	3525	1530
rps16	gene	ribosomal-protein	−	4931	6072	1141
trnQ-UUG	gene	translation-rna	−	6897	6969	72
psbK	gene	photosystem-ii	+	7305	7491	186
psbI	gene	photosystem-ii	+	7866	7977	111
trnS-GCU	gene	translation-rna	−	8098	8186	88
trnS-CGA	gene	translation-rna	+	8863	9625	762
trnR-UCU	gene	translation-rna	+	9784	9856	72
atpA	gene	atp-synthase	−	9952	11476	1524
atpF	gene	atp-synthase	−	11563	12775	1212
atpH	gene	atp-synthase	−	13141	13387	246
atpI	gene	atp-synthase	−	14342	15086	744
rps2	gene	ribosomal-protein	−	15316	16027	711
rpoC2	gene	rna-polymerase	−	16357	20446	4089
rpoC1	gene	rna-polymerase	−	20600	23437	2837
rpoB	gene	rna-polymerase	−	23463	26676	3213
trnC-GCA	gene	translation-rna	+	27774	27845	71
petN	gene	cytochrome	+	28682	28772	90
psbM	gene	photosystem-ii	−	29274	29379	105
trnD-GUC	gene	translation-rna	−	29897	29971	74
trnY-GUA	gene	translation-rna	−	30086	30170	84
trnE-UUC	gene	translation-rna	−	30229	30302	73
trnT-GGU	gene	translation-rna	+	30872	30944	72
psbD	gene	photosystem-ii	+	32014	33076	1062
psbC	gene	photosystem-ii	+	33023	34445	1422
trnS-UGA	gene	translation-rna	−	34673	34766	93
psbZ	gene	photosystem-ii	+	35093	35282	189
trnG-GCC	gene	translation-rna	+	35507	35578	71
trnM-CAU	gene	translation-rna	−	35726	35800	74
rps14	gene	ribosomal-protein	−	35949	36252	303
psaB	gene	photosystem-i	−	36387	38592	2205
psaA	gene	photosystem-i	−	38617	40870	2253
ycf3	gene	other	−	41619	43562	1943
trnS-GGA	gene	translation-rna	+	43878	43965	87
rps4	gene	ribosomal-protein	−	44112	44718	606
trnT-UGU	gene	translation-rna	−	45103	45176	73
trnL-UAA	gene	translation-rna	+	45860	46434	574
trnF-GAA	gene	translation-rna	+	46729	46802	73
ndhJ	gene	nad-dehydrogenase	−	47461	47938	477
ndhK	gene	nad-dehydrogenase	−	48038	48716	678
ndhC	gene	nad-dehydrogenase	−	48769	49132	363
trnM-CAU	gene	translation-rna	+	50910	50983	73
atpE	gene	atp-synthase	−	51196	51598	402
atpB	gene	atp-synthase	−	51594	53091	1497
rbcL	gene	other	+	53892	55338	1446
accD	gene	other	+	56038	57505	1467
psaI	gene	photosystem-i	+	57902	58013	111
ycf4	gene	other	+	58447	59002	555
cemA	gene	other	+	59308	59998	690
petA	gene	cytochrome	+	60221	61184	963
psbJ	gene	photosystem-ii	−	62227	62350	123
psbL	gene	photosystem-ii	−	62487	62604	117
psbF	gene	photosystem-ii	−	62627	62747	120
psbE	gene	photosystem-ii	−	62761	63013	252
petL	gene	cytochrome	+	63933	64029	96
petG	gene	cytochrome	+	64203	64317	114
trnW-CCA	gene	translation-rna	−	64442	64516	74
trnP-UGG	gene	translation-rna	−	64685	64759	74
psaJ	gene	photosystem-i	+	65031	65166	135
rpl33	gene	ribosomal-protein	+	65645	65846	201
rps18	gene	ribosomal-protein	+	65991	66297	306
rpl20	gene	ribosomal-protein	−	66513	66900	387
rps12	gene	ribosomal-protein	−	67640	95756	28116
rps12	gene	ribosomal-protein	+	67640	137295	69655
clpP	gene	other	−	67879	69735	1856
psbB	gene	photosystem-ii	+	70172	71699	1527
psbT	gene	photosystem-ii	+	71892	71994	102
psbN	gene	photosystem-ii	−	72067	72199	132
psbH	gene	photosystem-ii	+	72302	72524	222
petB	gene	cytochrome	+	72648	74021	1373
petD	gene	cytochrome	+	74214	75424	1210
rpoA	gene	rna-polymerase	−	75586	76600	1014
rps11	gene	ribosomal-protein	−	76671	77088	417
rpl36	gene	ribosomal-protein	−	77190	77304	114
infA	gene	other	−	77399	77633	234
rps8	gene	ribosomal-protein	−	77756	78170	414
rpl14	gene	ribosomal-protein	−	78337	78706	369
rpl16	gene	ribosomal-protein	−	78832	80126	1294
rps3	gene	ribosomal-protein	−	80279	80942	663
rpl22	gene	ribosomal-protein	−	80926	81391	465
rps19	gene	ribosomal-protein	−	81454	81733	279
rpl2	gene	ribosomal-protein	−	81784	83276	1492
rpl23	gene	ribosomal-protein	−	83294	83576	282
trnM-CAU	gene	translation-rna	−	83749	83823	74
ycf2	gene	other	+	86314	90778	4464
ycf15	gene	other	+	90871	91069	198
trnL-CAA	gene	translation-rna	−	91329	91410	81
ndhB	gene	nad-dehydrogenase	−	91955	94167	2212
rps7	gene	ribosomal-protein	−	94441	94909	468
trnV-GAC	gene	translation-rna	+	97367	97439	72
rrn16S	gene	ribosomal-rna	+	97666	99157	1491
trnI-UUC	gene	translation-rna	+	99450	100459	1009
trnA-UGC	gene	translation-rna	+	100523	101402	879
rrn23S	gene	ribosomal-rna	+	101593	104404	2811
rrn4.5S	gene	ribosomal-rna	+	104502	104605	103
rrn5S	gene	ribosomal-rna	+	104860	104981	121
trnR-ACG	gene	translation-rna	+	105215	105289	74
trnN-GUU	gene	translation-rna	−	105856	105928	72
ndhF	gene	nad-dehydrogenase	−	107317	109546	2229
rpl32	gene	ribosomal-protein	+	110036	110213	177
trnL-UAG	gene	translation-rna	+	110954	111034	80
ccsA	gene	other	+	111121	112093	972
ndhD	gene	nad-dehydrogenase	−	112274	113804	1530
psaC	gene	photosystem-i	−	113898	114144	246
ndhE	gene	nad-dehydrogenase	−	114395	114701	306
ndhG	gene	nad-dehydrogenase	−	114910	115441	531
ndhI	gene	nad-dehydrogenase	−	115816	116323	507
ndhA	gene	nad-dehydrogenase	−	116402	118515	2113
ndhH	gene	nad-dehydrogenase	−	118516	119698	1182
rps15	gene	ribosomal-protein	−	119798	120071	273
ycf1	gene	other	−	120460	126004	5544
trnN-GUU	gene	translation-rna	+	126329	126401	72
trnR-ACG	gene	translation-rna	−	126968	127042	74
rrn5S	gene	ribosomal-rna	−	127276	127397	121
rrn4.5S	gene	ribosomal-rna	−	127652	127755	103
rrn23S	gene	ribosomal-rna	−	127853	130664	2811
trnA-UGC	gene	translation-rna	−	130855	131734	879
trnI-UUC	gene	translation-rna	−	131798	132807	1009
rrn16S	gene	ribosomal-rna	−	133100	134591	1491
trnV-GAC	gene	translation-rna	−	134818	134890	72
rps7	gene	ribosomal-protein	+	137348	137816	468
ndhB	gene	nad-dehydrogenase	+	138090	140302	2212
trnL-CAA	gene	translation-rna	+	140847	140928	81
ycf15	gene	other	−	141188	141386	198
ycf2	gene	other	−	141479	145943	4464
trnM-CAU	gene	translation-rna	+	148434	148508	74
rpl23	gene	ribosomal-protein	+	148681	148963	282
rpl2	gene	ribosomal-protein	+	148981	150473	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_082543.1DNA · accDNC_082543DNA · atpBNC_082543DNA · matKNC_082543DNA · ndhFNC_082543DNA · psbANC_082543DNA · rbcLNC_082543DNA · rps12NC_082543DNA · ycf1NC_082543