Stachys recta subsp. labiosa chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · PP272178.1 · 2–75 bp · −
psbA · PP272178.1 · 555–1,613 bp · −
trnK-UUU · PP272178.1 · 1,844–4,429 bp · −
matK · PP272178.1 · 2,145–3,674 bp · −
rps16 · PP272178.1 · 5,093–6,233 bp · −
trnQ-UUG · PP272178.1 · 6,935–7,006 bp · −
trnS-GCU · PP272178.1 · 8,139–8,226 bp · −
atpA · PP272178.1 · 10,030–11,553 bp · −
atpF · PP272178.1 · 11,641–12,853 bp · −
atpH · PP272178.1 · 13,230–13,475 bp · −
atpI · PP272178.1 · 14,282–15,025 bp · −
rps2 · PP272178.1 · 15,250–15,960 bp · −
rpoC2 · PP272178.1 · 16,299–20,363 bp · −
rpoC1 · PP272178.1 · 20,530–23,340 bp · −
rpoB · PP272178.1 · 23,367–26,579 bp · −
psbM · PP272178.1 · 29,168–29,272 bp · −
trnD-GUC · PP272178.1 · 29,802–29,875 bp · −
trnY-GUA · PP272178.1 · 29,994–30,077 bp · −
trnE-UUC · PP272178.1 · 30,129–30,201 bp · −
trnS-UGA · PP272178.1 · 34,592–34,684 bp · −
trnM-CAU · PP272178.1 · 35,635–35,708 bp · −
rps14 · PP272178.1 · 35,858–36,160 bp · −
psaB · PP272178.1 · 36,293–38,497 bp · −
psaA · PP272178.1 · 38,523–40,775 bp · −
ycf3 · PP272178.1 · 41,498–43,440 bp · −
rps4 · PP272178.1 · 43,991–44,596 bp · −
trnT-UGU · PP272178.1 · 44,996–45,068 bp · −
ndhJ · PP272178.1 · 47,235–47,711 bp · −
ndhK · PP272178.1 · 47,812–48,489 bp · −
ndhC · PP272178.1 · 48,543–48,905 bp · −
trnV · PP272178.1 · 49,865–50,521 bp · −
atpE · PP272178.1 · 50,995–51,396 bp · −
atpB · PP272178.1 · 51,393–52,889 bp · −
psbJ · PP272178.1 · 62,012–62,134 bp · −
psbL · PP272178.1 · 62,272–62,388 bp · −
psbF · PP272178.1 · 62,412–62,531 bp · −
psbE · PP272178.1 · 62,546–62,797 bp · −
trnW-CCA · PP272178.1 · 64,226–64,299 bp · −
trnP-UGG · PP272178.1 · 64,468–64,541 bp · −
rpl20 · PP272178.1 · 66,299–66,685 bp · −
rps12 · PP272178.1 · 67,429–67,542 bp · −
rps12 · PP272178.1 · 94,778–95,571 bp · −
clpP · PP272178.1 · 67,668–69,544 bp · −
psbN · PP272178.1 · 71,880–72,011 bp · −
rpoA · PP272178.1 · 75,409–76,422 bp · −
rps11 · PP272178.1 · 76,494–76,910 bp · −
rpl36 · PP272178.1 · 77,013–77,126 bp · −
infA · PP272178.1 · 77,222–77,455 bp · −
rps8 · PP272178.1 · 77,578–77,991 bp · −
rpl14 · PP272178.1 · 78,159–78,527 bp · −
rpl16 · PP272178.1 · 78,654–79,955 bp · −
rps3 · PP272178.1 · 80,101–80,763 bp · −
rpl22 · PP272178.1 · 80,748–81,212 bp · −
rps19 · PP272178.1 · 81,276–81,554 bp · −
rpl2 · PP272178.1 · 81,606–83,097 bp · −
rpl23 · PP272178.1 · 83,116–83,397 bp · −
trnM-CAU · PP272178.1 · 83,571–83,644 bp · −
trnL-CAA · PP272178.1 · 91,146–91,226 bp · −
ndhB · PP272178.1 · 91,771–93,982 bp · −
rps7 · PP272178.1 · 94,257–94,724 bp · −
trnN-GUU · PP272178.1 · 105,671–105,742 bp · −
ndhF · PP272178.1 · 107,132–109,360 bp · −
ndhD · PP272178.1 · 111,992–113,521 bp · −
psaC · PP272178.1 · 113,616–113,861 bp · −
ndhE · PP272178.1 · 114,113–114,418 bp · −
ndhG · PP272178.1 · 114,628–115,158 bp · −
ndhI · PP272178.1 · 115,517–116,023 bp · −
ndhA · PP272178.1 · 116,104–118,251 bp · −
ndhH · PP272178.1 · 118,253–119,434 bp · −
rps15 · PP272178.1 · 119,535–119,807 bp · −
ycf1 · PP272178.1 · 120,200–125,725 bp · −
trnR-ACG · PP272178.1 · 126,684–126,757 bp · −
rrn5S · PP272178.1 · 126,992–127,112 bp · −
rrn4.5S · PP272178.1 · 127,368–127,470 bp · −
rrn23S · PP272178.1 · 127,569–130,379 bp · −
trnA-UGC · PP272178.1 · 130,571–131,449 bp · −
trnI-UUC · PP272178.1 · 131,514–132,522 bp · −
rrn16S · PP272178.1 · 132,812–134,302 bp · −
trnV-GAC · PP272178.1 · 134,530–134,601 bp · −
ycf15 · PP272178.1 · 140,909–141,157 bp · −
ycf2 · PP272178.1 · 141,200–148,060 bp · −
psbK · PP272178.1 · 7,343–7,528 bp · +
psbI · PP272178.1 · 7,907–8,017 bp · +
trnG-UCC · PP272178.1 · 8,927–9,685 bp · +
trnR-UCU · PP272178.1 · 9,862–9,933 bp · +
trnC-GCA · PP272178.1 · 27,678–27,748 bp · +
petN · PP272178.1 · 28,575–28,664 bp · +
trnT-GGU · PP272178.1 · 30,774–30,845 bp · +
psbD · PP272178.1 · 31,933–32,994 bp · +
psbC · PP272178.1 · 32,942–34,363 bp · +
psbZ · PP272178.1 · 35,012–35,200 bp · +
trnG-GCC · PP272178.1 · 35,424–35,494 bp · +
trnS-GGA · PP272178.1 · 43,749–43,835 bp · +
trnL-UAA · PP272178.1 · 45,739–46,312 bp · +
trnF-GAA · PP272178.1 · 46,482–46,554 bp · +
trnM-CAU · PP272178.1 · 50,710–50,782 bp · +
rbcL · PP272178.1 · 53,693–55,138 bp · +
accD · PP272178.1 · 55,830–57,287 bp · +
psaI · PP272178.1 · 57,695–57,805 bp · +
ycf4 · PP272178.1 · 58,240–58,794 bp · +
cemA · PP272178.1 · 59,106–59,795 bp · +
petA · PP272178.1 · 60,012–60,974 bp · +
petL · PP272178.1 · 63,717–63,812 bp · +
petG · PP272178.1 · 63,987–64,100 bp · +
psaJ · PP272178.1 · 64,816–64,950 bp · +
rpl33 · PP272178.1 · 65,428–65,628 bp · +
rps18 · PP272178.1 · 65,776–66,081 bp · +
rps12 · PP272178.1 · 136,222–137,015 bp · +
psbB · PP272178.1 · 69,987–71,513 bp · +
psbT · PP272178.1 · 71,705–71,806 bp · +
psbH · PP272178.1 · 72,115–72,336 bp · +
petB · PP272178.1 · 72,461–73,842 bp · +
petD · PP272178.1 · 74,037–75,246 bp · +
ycf2 · PP272178.1 · 83,733–90,593 bp · +
ycf15 · PP272178.1 · 90,636–90,884 bp · +
trnV-GAC · PP272178.1 · 97,192–97,263 bp · +
rrn16S · PP272178.1 · 97,491–98,981 bp · +
trnI-UUC · PP272178.1 · 99,271–100,279 bp · +
trnA-UGC · PP272178.1 · 100,344–101,222 bp · +
rrn23S · PP272178.1 · 101,414–104,224 bp · +
rrn4.5S · PP272178.1 · 104,323–104,425 bp · +
rrn5S · PP272178.1 · 104,681–104,801 bp · +
trnR-ACG · PP272178.1 · 105,036–105,109 bp · +
ycf1 · PP272178.1 · 106,068–107,198 bp · +
rpl32 · PP272178.1 · 109,801–109,977 bp · +
trnL-UAG · PP272178.1 · 110,668–110,747 bp · +
ccsA · PP272178.1 · 110,840–111,811 bp · +
trnN-GUU · PP272178.1 · 126,051–126,122 bp · +
rps7 · PP272178.1 · 137,069–137,536 bp · +
ndhB · PP272178.1 · 137,811–140,022 bp · +
trnL-CAA · PP272178.1 · 140,567–140,647 bp · +
trnM-CAU · PP272178.1 · 148,149–148,222 bp · +
rpl23 · PP272178.1 · 148,396–148,677 bp · +
rpl2 · PP272178.1 · 148,696–150,187 bp · +
rps19 · PP272178.1 · 150,239–150,280 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Stachys recta subsp. labiosa
ANNOTATED PLASTOME
PP272178.1
150,280 bp · 134 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37570 75140 112710 150280 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI-UUC trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2 rps19
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-UUC rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
135 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 555 1613 1059 Locate
trnK-UUU gene − 1844 4429 2586 Locate
matK gene − 2145 3674 1530 Locate
rps16 gene − 5093 6233 1141 Locate
trnQ-UUG gene − 6935 7006 72 Locate
psbK gene + 7343 7528 186 Locate
psbI gene + 7907 8017 111 Locate
trnS-GCU gene − 8139 8226 88 Locate
trnG-UCC gene + 8927 9685 759 Locate
trnR-UCU gene + 9862 9933 72 Locate
atpA gene − 10030 11553 1524 Locate
atpF gene − 11641 12853 1213 Locate
atpH gene − 13230 13475 246 Locate
atpI gene − 14282 15025 744 Locate
rps2 gene − 15250 15960 711 Locate
rpoC2 gene − 16299 20363 4065 Locate
rpoC1 gene − 20530 23340 2811 Locate
rpoB gene − 23367 26579 3213 Locate
trnC-GCA gene + 27678 27748 71 Locate
petN gene + 28575 28664 90 Locate
psbM gene − 29168 29272 105 Locate
trnD-GUC gene − 29802 29875 74 Locate
trnY-GUA gene − 29994 30077 84 Locate
trnE-UUC gene − 30129 30201 73 Locate
trnT-GGU gene + 30774 30845 72 Locate
psbD gene + 31933 32994 1062 Locate
psbC gene + 32942 34363 1422 Locate
trnS-UGA gene − 34592 34684 93 Locate
psbZ gene + 35012 35200 189 Locate
trnG-GCC gene + 35424 35494 71 Locate
trnM-CAU gene − 35635 35708 74 Locate
rps14 gene − 35858 36160 303 Locate
psaB gene − 36293 38497 2205 Locate
psaA gene − 38523 40775 2253 Locate
ycf3 gene − 41498 43440 1943 Locate
trnS-GGA gene + 43749 43835 87 Locate
rps4 gene − 43991 44596 606 Locate
trnT-UGU gene − 44996 45068 73 Locate
trnL-UAA gene + 45739 46312 574 Locate
trnF-GAA gene + 46482 46554 73 Locate
ndhJ gene − 47235 47711 477 Locate
ndhK gene − 47812 48489 678 Locate
ndhC gene − 48543 48905 363 Locate
trnV gene − 49865 50521 657 Locate
trnM-CAU gene + 50710 50782 73 Locate
atpE gene − 50995 51396 402 Locate
atpB gene − 51393 52889 1497 Locate
rbcL gene + 53693 55138 1446 Locate
accD gene + 55830 57287 1458 Locate
psaI gene + 57695 57805 111 Locate
ycf4 gene + 58240 58794 555 Locate
cemA gene + 59106 59795 690 Locate
petA gene + 60012 60974 963 Locate
psbJ gene − 62012 62134 123 Locate
psbL gene − 62272 62388 117 Locate
psbF gene − 62412 62531 120 Locate
psbE gene − 62546 62797 252 Locate
petL gene + 63717 63812 96 Locate
petG gene + 63987 64100 114 Locate
trnW-CCA gene − 64226 64299 74 Locate
trnP-UGG gene − 64468 64541 74 Locate
psaJ gene + 64816 64950 135 Locate
rpl33 gene + 65428 65628 201 Locate
rps18 gene + 65776 66081 306 Locate
rpl20 gene − 66299 66685 387 Locate
rps12 gene − 67429 67542 114 Locate
clpP gene − 67668 69544 1877 Locate
psbB gene + 69987 71513 1527 Locate
psbT gene + 71705 71806 102 Locate
psbN gene − 71880 72011 132 Locate
psbH gene + 72115 72336 222 Locate
petB gene + 72461 73842 1382 Locate
petD gene + 74037 75246 1210 Locate
rpoA gene − 75409 76422 1014 Locate
rps11 gene − 76494 76910 417 Locate
rpl36 gene − 77013 77126 114 Locate
infA gene − 77222 77455 234 Locate
rps8 gene − 77578 77991 414 Locate
rpl14 gene − 78159 78527 369 Locate
rpl16 gene − 78654 79955 1302 Locate
rps3 gene − 80101 80763 663 Locate
rpl22 gene − 80748 81212 465 Locate
rps19 gene − 81276 81554 279 Locate
rpl2 gene − 81606 83097 1492 Locate
rpl23 gene − 83116 83397 282 Locate
trnM-CAU gene − 83571 83644 74 Locate
ycf2 gene + 83733 90593 6861 Locate
ycf15 gene + 90636 90884 249 Locate
trnL-CAA gene − 91146 91226 81 Locate
ndhB gene − 91771 93982 2212 Locate
rps7 gene − 94257 94724 468 Locate
rps12 gene − 94778 95571 794 Locate
trnV-GAC gene + 97192 97263 72 Locate
rrn16S gene + 97491 98981 1491 Locate
trnI-UUC gene + 99271 100279 1009 Locate
trnA-UGC gene + 100344 101222 879 Locate
rrn23S gene + 101414 104224 2811 Locate
rrn4.5S gene + 104323 104425 103 Locate
rrn5S gene + 104681 104801 121 Locate
trnR-ACG gene + 105036 105109 74 Locate
trnN-GUU gene − 105671 105742 72 Locate
ycf1 gene + 106068 107198 1131 Locate
ndhF gene − 107132 109360 2229 Locate
rpl32 gene + 109801 109977 177 Locate
trnL-UAG gene + 110668 110747 80 Locate
ccsA gene + 110840 111811 972 Locate
ndhD gene − 111992 113521 1530 Locate
psaC gene − 113616 113861 246 Locate
ndhE gene − 114113 114418 306 Locate
ndhG gene − 114628 115158 531 Locate
ndhI gene − 115517 116023 507 Locate
ndhA gene − 116104 118251 2148 Locate
ndhH gene − 118253 119434 1182 Locate
rps15 gene − 119535 119807 273 Locate
ycf1 gene − 120200 125725 5526 Locate
trnN-GUU gene + 126051 126122 72 Locate
trnR-ACG gene − 126684 126757 74 Locate
rrn5S gene − 126992 127112 121 Locate
rrn4.5S gene − 127368 127470 103 Locate
rrn23S gene − 127569 130379 2811 Locate
trnA-UGC gene − 130571 131449 879 Locate
trnI-UUC gene − 131514 132522 1009 Locate
rrn16S gene − 132812 134302 1491 Locate
trnV-GAC gene − 134530 134601 72 Locate
rps12 gene + 136222 137015 794 Locate
rps7 gene + 137069 137536 468 Locate
ndhB gene + 137811 140022 2212 Locate
trnL-CAA gene + 140567 140647 81 Locate
ycf15 gene − 140909 141157 249 Locate
ycf2 gene − 141200 148060 6861 Locate
trnM-CAU gene + 148149 148222 74 Locate
rpl23 gene + 148396 148677 282 Locate
rpl2 gene + 148696 150187 1492 Locate
rps19 gene + 150239 150280 42 Locate
Status Available
Accession PP272178.1
Length 150,280 bp
GC content 38.6%
Annotated genes 134
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 15 Ribosomal Protein 27 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources