Coordinate-aware organelle record

Thymbra capitata chloroplast genome

Available NC_086488.1 151,475 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	381	1440	1059
trnK-UUU	gene	translation-rna	−	1660	4208	2548
matK	gene	other	−	1940	3470	1530
rps16	gene	ribosomal-protein	−	4759	5898	1139
trnQ-UUG	gene	translation-rna	−	6832	6904	72
psbK	gene	photosystem-ii	+	7290	7476	186
psbI	gene	photosystem-ii	+	7864	7975	111
trnS-GCU	gene	translation-rna	−	8128	8216	88
trnG-UCC	gene	translation-rna	+	8897	9652	755
trnR-UCU	gene	translation-rna	+	9833	9905	72
atpA	gene	atp-synthase	−	10009	11533	1524
atpF	gene	atp-synthase	−	11628	12884	1256
atpH	gene	atp-synthase	−	13163	13409	246
atpI	gene	atp-synthase	−	14419	15163	744
rps2	gene	ribosomal-protein	−	15385	16096	711
rpoC2	gene	rna-polymerase	−	16315	20503	4188
rpoC1	gene	rna-polymerase	−	20675	23487	2812
rpoB	gene	rna-polymerase	−	23513	26726	3213
trnC-GCA	gene	translation-rna	+	27861	27932	71
petN	gene	cytochrome	+	28093	28183	90
psbM	gene	photosystem-ii	−	29155	29260	105
trnD-GUC	gene	translation-rna	−	29768	29842	74
trnY-GUA	gene	translation-rna	−	29952	30036	84
trnE-UUC	gene	translation-rna	−	30115	30188	73
trnT-GGU	gene	translation-rna	+	30746	30818	72
psbD	gene	photosystem-ii	+	32149	33211	1062
psbC	gene	photosystem-ii	+	33194	34580	1386
trnS-UGA	gene	translation-rna	−	34822	34915	93
psbZ	gene	photosystem-ii	+	35254	35443	189
trnG-GCC	gene	translation-rna	+	35716	35787	71
trnfM-CAU	gene	translation-rna	−	35948	36022	74
rps14	gene	ribosomal-protein	−	36177	36480	303
psaB	gene	photosystem-i	−	36602	38807	2205
psaA	gene	photosystem-i	−	38832	41085	2253
pafI	gene	other	−	41873	43811	1938
trnS-GGA	gene	translation-rna	+	44251	44338	87
rps4	gene	ribosomal-protein	−	44611	45217	606
trnT-UGU	gene	translation-rna	−	45601	45674	73
trnL-UAA	gene	translation-rna	+	46329	46908	579
trnF-GAA	gene	translation-rna	+	47200	47273	73
ndhJ	gene	nad-dehydrogenase	−	47911	48388	477
ndhK	gene	nad-dehydrogenase	−	48498	49176	678
ndhC	gene	nad-dehydrogenase	−	49227	49590	363
trnV-UAC	gene	translation-rna	−	50536	51182	646
trnM-CAU	gene	translation-rna	+	51362	51435	73
atpE	gene	atp-synthase	−	51629	52031	402
atpB	gene	atp-synthase	−	52027	53518	1491
rbcL	gene	other	+	54315	55749	1434
accD	gene	other	+	56440	57922	1482
psaI	gene	photosystem-i	+	58385	58496	111
pafII	gene	other	+	58949	59504	555
cemA	gene	other	+	60141	60831	690
petA	gene	cytochrome	+	61044	62007	963
psbJ	gene	photosystem-ii	−	63027	63150	123
psbL	gene	photosystem-ii	−	63284	63401	117
psbF	gene	photosystem-ii	−	63424	63544	120
psbE	gene	photosystem-ii	−	63558	63810	252
petL	gene	cytochrome	+	64689	64785	96
petG	gene	cytochrome	+	64955	65069	114
trnW-CCA	gene	translation-rna	−	65183	65257	74
trnP-UGG	gene	translation-rna	−	65430	65504	74
psaJ	gene	photosystem-i	+	65776	65911	135
rpl33	gene	ribosomal-protein	+	66361	66565	204
rps18	gene	ribosomal-protein	+	66735	67041	306
rpl20	gene	ribosomal-protein	−	67274	67661	387
rps12	gene	ribosomal-protein	−	68519	96622	28103
clpP1	gene	other	−	68757	70663	1906
psbB	gene	photosystem-ii	+	71114	72641	1527
psbT	gene	photosystem-ii	+	72832	72934	102
pbf1	gene	other	−	72997	73129	132
psbH	gene	photosystem-ii	+	73234	73456	222
petB	gene	cytochrome	+	73581	74962	1381
petD	gene	cytochrome	+	75149	76334	1185
rpoA	gene	rna-polymerase	−	76516	77524	1008
rps11	gene	ribosomal-protein	−	77595	78012	417
rpl36	gene	ribosomal-protein	−	78121	78235	114
infA	gene	other	−	78330	78564	234
rps8	gene	ribosomal-protein	−	78689	79094	405
rpl14	gene	ribosomal-protein	−	79261	79630	369
rpl16	gene	ribosomal-protein	−	79761	81041	1280
rps3	gene	ribosomal-protein	−	81185	81848	663
rpl22	gene	ribosomal-protein	−	81849	82305	456
rps19	gene	ribosomal-protein	−	82374	82653	279
rpl2	gene	ribosomal-protein	−	82711	84201	1490
rpl23	gene	ribosomal-protein	−	84219	84501	282
trnI-CAU	gene	translation-rna	−	84666	84740	74
ycf2	gene	other	+	84828	91614	6786
ycf15	gene	other	+	91689	91953	264
trnL-CAA	gene	translation-rna	−	92203	92284	81
ndhB	gene	nad-dehydrogenase	−	92844	95052	2208
rps7	gene	ribosomal-protein	−	95317	95785	468
trnV-GAC	gene	translation-rna	+	98258	98330	72
rrn16	gene	ribosomal-rna	+	98556	100047	1491
trnI-GAU	gene	translation-rna	+	100345	101368	1023
trnA-UGC	gene	translation-rna	+	101437	102315	878
rrn23	gene	ribosomal-rna	+	102492	105303	2811
rrn4.5	gene	ribosomal-rna	+	105401	105504	103
rrn5	gene	ribosomal-rna	+	105760	105881	121
trnR-ACG	gene	translation-rna	+	106124	106198	74
trnN-GUU	gene	translation-rna	−	106722	106794	72
ycf1	gene	other	+	107123	108254	1131
ndhF	gene	nad-dehydrogenase	−	108147	110379	2232
rpl32	gene	ribosomal-protein	+	110846	111017	171
trnL-UAG	gene	translation-rna	+	111739	111819	80
ccsA	gene	other	+	111919	112897	978
ndhD	gene	nad-dehydrogenase	−	113136	114447	1311
psaC	gene	photosystem-i	−	114764	115010	246
ndhE	gene	nad-dehydrogenase	−	115250	115556	306
ndhG	gene	nad-dehydrogenase	−	115779	116310	531
ndhI	gene	nad-dehydrogenase	−	116686	117193	507
ndhA	gene	nad-dehydrogenase	−	117273	119369	2096
ndhH	gene	nad-dehydrogenase	−	119370	120552	1182
rps15	gene	ribosomal-protein	−	120651	120924	273
ycf1	gene	other	−	121350	126906	5556
trnN-GUU	gene	translation-rna	+	127235	127307	72
trnR-ACG	gene	translation-rna	−	127831	127905	74
rrn5	gene	ribosomal-rna	−	128148	128269	121
rrn4.5	gene	ribosomal-rna	−	128525	128628	103
rrn23	gene	ribosomal-rna	−	128726	131537	2811
trnA-UGC	gene	translation-rna	−	131714	132592	878
trnI-GAU	gene	translation-rna	−	132661	133684	1023
rrn16	gene	ribosomal-rna	−	133982	135473	1491
trnV-GAC	gene	translation-rna	−	135699	135771	72
rps7	gene	ribosomal-protein	+	138244	138712	468
ndhB	gene	nad-dehydrogenase	+	138977	141185	2208
trnL-CAA	gene	translation-rna	+	141745	141826	81
ycf15	gene	other	−	142076	142340	264
ycf2	gene	other	−	142415	149201	6786
trnI-CAU	gene	translation-rna	+	149289	149363	74
rpl23	gene	ribosomal-protein	+	149528	149810	282
rpl2	gene	ribosomal-protein	+	149828	151318	1490

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_086488.1DNA · accDNC_086488DNA · atpBNC_086488DNA · matKNC_086488DNA · ndhFNC_086488DNA · psbANC_086488DNA · rbcLNC_086488DNA · rps12NC_086488DNA · ycf1NC_086488