Coordinate-aware organelle record

Thymus mastichina chloroplast genome

Available NC_086485.1 151,722 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	412	1471	1059
trnK-UUU	gene	translation-rna	−	1691	4232	2541
matK	gene	other	−	1971	3495	1524
rps16	gene	ribosomal-protein	−	4776	5921	1145
trnQ-UUG	gene	translation-rna	−	6842	6914	72
psbK	gene	photosystem-ii	+	7294	7480	186
psbI	gene	photosystem-ii	+	7873	7984	111
trnS-GCU	gene	translation-rna	−	8134	8222	88
trnG-UCC	gene	translation-rna	+	8911	9668	757
trnR-UCU	gene	translation-rna	+	9848	9920	72
atpA	gene	atp-synthase	−	10027	11551	1524
atpF	gene	atp-synthase	−	11644	12910	1266
atpH	gene	atp-synthase	−	13195	13441	246
atpI	gene	atp-synthase	−	14493	15237	744
rps2	gene	ribosomal-protein	−	15460	16171	711
rpoC2	gene	rna-polymerase	−	16389	20571	4182
rpoC1	gene	rna-polymerase	−	20732	23537	2805
rpoB	gene	rna-polymerase	−	23563	26776	3213
trnC-GCA	gene	translation-rna	+	27898	27969	71
petN	gene	cytochrome	+	28129	28219	90
psbM	gene	photosystem-ii	−	29197	29302	105
trnD-GUC	gene	translation-rna	−	29819	29893	74
trnY-GUA	gene	translation-rna	−	30003	30087	84
trnE-UUC	gene	translation-rna	−	30166	30239	73
trnT-GGU	gene	translation-rna	+	30799	30871	72
psbD	gene	photosystem-ii	+	32217	33279	1062
psbC	gene	photosystem-ii	+	33262	34648	1386
trnS-UGA	gene	translation-rna	−	34895	34988	93
psbZ	gene	photosystem-ii	+	35331	35520	189
trnG-GCC	gene	translation-rna	+	35791	35862	71
trnfM-CAU	gene	translation-rna	−	36024	36098	74
rps14	gene	ribosomal-protein	−	36242	36545	303
psaB	gene	photosystem-i	−	36667	38872	2205
psaA	gene	photosystem-i	−	38897	41150	2253
pafI	gene	other	−	41915	43843	1928
trnS-GGA	gene	translation-rna	+	44685	44772	87
rps4	gene	ribosomal-protein	−	45059	45665	606
trnT-UGU	gene	translation-rna	−	46048	46121	73
trnL-UAA	gene	translation-rna	+	46785	47340	555
trnF-GAA	gene	translation-rna	+	47632	47705	73
ndhJ	gene	nad-dehydrogenase	−	48340	48817	477
ndhK	gene	nad-dehydrogenase	−	48927	49605	678
ndhC	gene	nad-dehydrogenase	−	49656	50019	363
trnV-UAC	gene	translation-rna	−	50981	51625	644
trnM-CAU	gene	translation-rna	+	51805	51878	73
atpE	gene	atp-synthase	−	52073	52475	402
atpB	gene	atp-synthase	−	52471	53962	1491
rbcL	gene	other	+	54755	56189	1434
accD	gene	other	+	56878	58360	1482
psaI	gene	photosystem-i	+	58822	58933	111
pafII	gene	other	+	59380	59935	555
cemA	gene	other	+	60580	61270	690
petA	gene	cytochrome	+	61479	62442	963
psbJ	gene	photosystem-ii	−	63433	63556	123
psbL	gene	photosystem-ii	−	63690	63807	117
psbF	gene	photosystem-ii	−	63830	63950	120
psbE	gene	photosystem-ii	−	63964	64216	252
petL	gene	cytochrome	+	65093	65189	96
petG	gene	cytochrome	+	65359	65473	114
trnW-CCA	gene	translation-rna	−	65593	65667	74
trnP-UGG	gene	translation-rna	−	65840	65914	74
psaJ	gene	photosystem-i	+	66193	66328	135
rpl33	gene	ribosomal-protein	+	66764	66968	204
rps18	gene	ribosomal-protein	+	67141	67447	306
rpl20	gene	ribosomal-protein	−	67678	68065	387
rps12	gene	ribosomal-protein	−	68876	96956	28080
clpP1	gene	other	−	69113	71020	1907
psbB	gene	photosystem-ii	+	71471	72998	1527
psbT	gene	photosystem-ii	+	73172	73274	102
pbf1	gene	other	−	73342	73474	132
psbH	gene	photosystem-ii	+	73579	73801	222
petB	gene	cytochrome	+	73926	75304	1378
petD	gene	cytochrome	+	75501	76680	1179
rpoA	gene	rna-polymerase	−	76862	77870	1008
rps11	gene	ribosomal-protein	−	77942	78359	417
rpl36	gene	ribosomal-protein	−	78468	78582	114
infA	gene	other	−	78645	78879	234
rps8	gene	ribosomal-protein	−	79005	79410	405
rpl14	gene	ribosomal-protein	−	79580	79949	369
rpl16	gene	ribosomal-protein	−	80080	81354	1274
rps3	gene	ribosomal-protein	−	81498	82161	663
rpl22	gene	ribosomal-protein	−	82145	82613	468
rps19	gene	ribosomal-protein	−	82682	82961	279
rpl2	gene	ribosomal-protein	−	83020	84508	1488
rpl23	gene	ribosomal-protein	−	84526	84808	282
trnI-CAU	gene	translation-rna	−	84973	85047	74
ycf2	gene	other	+	85135	91933	6798
ycf15	gene	other	+	92023	92272	249
trnL-CAA	gene	translation-rna	−	92527	92608	81
ndhB	gene	nad-dehydrogenase	−	93168	95376	2208
rps7	gene	ribosomal-protein	−	95641	96109	468
trnV-GAC	gene	translation-rna	+	98587	98659	72
rrn16	gene	ribosomal-rna	+	98885	100376	1491
trnI-GAU	gene	translation-rna	+	100674	101695	1021
trnA-UGC	gene	translation-rna	+	101764	102642	878
rrn23	gene	ribosomal-rna	+	102807	105618	2811
rrn4.5	gene	ribosomal-rna	+	105716	105819	103
rrn5	gene	ribosomal-rna	+	106079	106200	121
trnR-ACG	gene	translation-rna	+	106443	106517	74
trnN-GUU	gene	translation-rna	−	107041	107113	72
ycf1	gene	other	+	107442	108573	1131
ndhF	gene	nad-dehydrogenase	−	108466	110698	2232
rpl32	gene	ribosomal-protein	+	111155	111326	171
trnL-UAG	gene	translation-rna	+	112039	112119	80
ccsA	gene	other	+	112216	113194	978
ndhD	gene	nad-dehydrogenase	−	113444	114833	1389
psaC	gene	photosystem-i	−	115071	115317	246
ndhE	gene	nad-dehydrogenase	−	115551	115857	306
ndhG	gene	nad-dehydrogenase	−	116080	116611	531
ndhI	gene	nad-dehydrogenase	−	116999	117506	507
ndhA	gene	nad-dehydrogenase	−	117581	119673	2092
ndhH	gene	nad-dehydrogenase	−	119674	120856	1182
rps15	gene	ribosomal-protein	−	120955	121228	273
ycf1	gene	other	−	121648	127198	5550
trnN-GUU	gene	translation-rna	+	127527	127599	72
trnR-ACG	gene	translation-rna	−	128123	128197	74
rrn5	gene	ribosomal-rna	−	128440	128561	121
rrn4.5	gene	ribosomal-rna	−	128821	128924	103
rrn23	gene	ribosomal-rna	−	129022	131833	2811
trnA-UGC	gene	translation-rna	−	131998	132876	878
trnI-GAU	gene	translation-rna	−	132945	133966	1021
rrn16	gene	ribosomal-rna	−	134264	135755	1491
trnV-GAC	gene	translation-rna	−	135981	136053	72
rps7	gene	ribosomal-protein	+	138531	138999	468
ndhB	gene	nad-dehydrogenase	+	139264	141472	2208
trnL-CAA	gene	translation-rna	+	142032	142113	81
ycf15	gene	other	−	142368	142617	249
ycf2	gene	other	−	142707	149505	6798
trnI-CAU	gene	translation-rna	+	149593	149667	74
rpl23	gene	ribosomal-protein	+	149832	150114	282
rpl2	gene	ribosomal-protein	+	150132	151620	1488

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_086485.1DNA · accDNC_086485DNA · atpBNC_086485DNA · matKNC_086485DNA · ndhFNC_086485DNA · psbANC_086485DNA · rbcLNC_086485DNA · rps12NC_086485DNA · ycf1NC_086485