Coordinate-aware organelle record

Thymus vulgaris chloroplast genome

Available NC_086487.1 151,649 bp 132 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

132 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	85	75
psbA	gene	photosystem-ii	−	407	1466	1059
trnK-UUU	gene	translation-rna	−	1686	4236	2550
matK	gene	other	−	1966	3499	1533
rps16	gene	ribosomal-protein	−	4788	5933	1145
trnQ-UUG	gene	translation-rna	−	6843	6915	72
psbK	gene	photosystem-ii	+	7295	7481	186
psbI	gene	photosystem-ii	+	7868	7979	111
trnS-GCU	gene	translation-rna	−	8131	8219	88
trnG-UCC	gene	translation-rna	+	8909	9667	758
trnR-UCU	gene	translation-rna	+	9848	9920	72
atpA	gene	atp-synthase	−	10026	11550	1524
atpF	gene	atp-synthase	−	11643	12904	1261
atpH	gene	atp-synthase	−	13170	13416	246
atpI	gene	atp-synthase	−	14450	15194	744
rps2	gene	ribosomal-protein	−	15417	16128	711
rpoC2	gene	rna-polymerase	−	16346	20528	4182
rpoC1	gene	rna-polymerase	−	20689	23494	2805
rpoB	gene	rna-polymerase	−	23520	26733	3213
trnC-GCA	gene	translation-rna	+	27861	27932	71
petN	gene	cytochrome	+	28092	28182	90
psbM	gene	photosystem-ii	−	29166	29271	105
trnD-GUC	gene	translation-rna	−	29788	29862	74
trnY-GUA	gene	translation-rna	−	29972	30056	84
trnE-UUC	gene	translation-rna	−	30135	30208	73
trnT-GGU	gene	translation-rna	+	30767	30839	72
psbD	gene	photosystem-ii	+	32183	33245	1062
psbC	gene	photosystem-ii	+	33228	34614	1386
trnS-UGA	gene	translation-rna	−	34862	34955	93
psbZ	gene	photosystem-ii	+	35300	35489	189
trnG-GCC	gene	translation-rna	+	35760	35831	71
trnfM-CAU	gene	translation-rna	−	35993	36067	74
rps14	gene	ribosomal-protein	−	36211	36514	303
psaB	gene	photosystem-i	−	36636	38841	2205
psaA	gene	photosystem-i	−	38866	41119	2253
pafI	gene	other	−	41889	43817	1928
trnS-GGA	gene	translation-rna	+	44654	44741	87
rps4	gene	ribosomal-protein	−	45028	45634	606
trnT-UGU	gene	translation-rna	−	46014	46087	73
trnL-UAA	gene	translation-rna	+	46766	47321	555
trnF-GAA	gene	translation-rna	+	47613	47686	73
ndhJ	gene	nad-dehydrogenase	−	48327	48804	477
ndhK	gene	nad-dehydrogenase	−	48914	49592	678
ndhC	gene	nad-dehydrogenase	−	49643	50006	363
trnV-UAC	gene	translation-rna	−	50893	51537	644
trnM-CAU	gene	translation-rna	+	51717	51790	73
atpE	gene	atp-synthase	−	51985	52387	402
atpB	gene	atp-synthase	−	52383	53874	1491
rbcL	gene	other	+	54667	56101	1434
accD	gene	other	+	56791	58273	1482
psaI	gene	photosystem-i	+	58736	58847	111
pafII	gene	other	+	59302	59857	555
cemA	gene	other	+	60499	61189	690
petA	gene	cytochrome	+	61402	62365	963
psbJ	gene	photosystem-ii	−	63360	63483	123
psbL	gene	photosystem-ii	−	63617	63734	117
psbF	gene	photosystem-ii	−	63757	63877	120
psbE	gene	photosystem-ii	−	63891	64143	252
petL	gene	cytochrome	+	65020	65116	96
petG	gene	cytochrome	+	65285	65399	114
trnW-CCA	gene	translation-rna	−	65519	65593	74
trnP-UGG	gene	translation-rna	−	65766	65840	74
psaJ	gene	photosystem-i	+	66110	66245	135
rpl33	gene	ribosomal-protein	+	66687	66891	204
rps18	gene	ribosomal-protein	+	67055	67361	306
rpl20	gene	ribosomal-protein	−	67594	67981	387
rps12	gene	ribosomal-protein	−	68784	96845	28061
clpP1	gene	other	−	69021	70928	1907
psbB	gene	photosystem-ii	+	71379	72906	1527
psbT	gene	photosystem-ii	+	73079	73181	102
pbf1	gene	other	−	73249	73381	132
psbH	gene	photosystem-ii	+	73486	73708	222
petB	gene	cytochrome	+	73833	75211	1378
petD	gene	cytochrome	+	75398	76577	1179
rpoA	gene	rna-polymerase	−	76759	77767	1008
rps11	gene	ribosomal-protein	−	77838	78255	417
rpl36	gene	ribosomal-protein	−	78364	78478	114
infA	gene	other	−	78541	78775	234
rps8	gene	ribosomal-protein	−	78899	79304	405
rpl14	gene	ribosomal-protein	−	79477	79846	369
rpl16	gene	ribosomal-protein	−	79977	81242	1265
rps3	gene	ribosomal-protein	−	81386	82049	663
rpl22	gene	ribosomal-protein	−	82033	82501	468
rps19	gene	ribosomal-protein	−	82570	82849	279
rpl2	gene	ribosomal-protein	−	82909	84397	1488
rpl23	gene	ribosomal-protein	−	84415	84697	282
trnI-CAU	gene	translation-rna	−	84862	84936	74
ycf2	gene	other	+	85024	91822	6798
ycf15	gene	other	+	91912	92161	249
trnL-CAA	gene	translation-rna	−	92416	92497	81
ndhB	gene	nad-dehydrogenase	−	93057	95265	2208
rps7	gene	ribosomal-protein	−	95530	95998	468
trnV-GAC	gene	translation-rna	+	98476	98548	72
rrn16	gene	ribosomal-rna	+	98774	100265	1491
trnI-GAU	gene	translation-rna	+	100563	101583	1020
trnA-UGC	gene	translation-rna	+	101652	102530	878
rrn23	gene	ribosomal-rna	+	102702	105513	2811
rrn4.5	gene	ribosomal-rna	+	105611	105714	103
rrn5	gene	ribosomal-rna	+	105974	106095	121
trnR-ACG	gene	translation-rna	+	106338	106412	74
trnN-GUU	gene	translation-rna	−	106936	107008	72
ycf1	gene	other	+	107337	108468	1131
ndhF	gene	nad-dehydrogenase	−	108361	110593	2232
rpl32	gene	ribosomal-protein	+	111065	111236	171
trnL-UAG	gene	translation-rna	+	111956	112036	80
ccsA	gene	other	+	112138	113116	978
ndhD	gene	nad-dehydrogenase	−	113366	114755	1389
psaC	gene	photosystem-i	−	114989	115235	246
ndhE	gene	nad-dehydrogenase	−	115469	115775	306
ndhG	gene	nad-dehydrogenase	−	116004	116535	531
ndhI	gene	nad-dehydrogenase	−	116932	117439	507
ndhA	gene	nad-dehydrogenase	−	117514	119599	2085
ndhH	gene	nad-dehydrogenase	−	119600	120782	1182
rps15	gene	ribosomal-protein	−	120881	121154	273
ycf1	gene	other	−	121574	127118	5544
trnN-GUU	gene	translation-rna	+	127447	127519	72
trnR-ACG	gene	translation-rna	−	128043	128117	74
rrn5	gene	ribosomal-rna	−	128360	128481	121
rrn4.5	gene	ribosomal-rna	−	128741	128844	103
rrn23	gene	ribosomal-rna	−	128942	131753	2811
trnA-UGC	gene	translation-rna	−	131925	132803	878
trnI-GAU	gene	translation-rna	−	132872	133892	1020
rrn16	gene	ribosomal-rna	−	134190	135681	1491
trnV-GAC	gene	translation-rna	−	135907	135979	72
rps7	gene	ribosomal-protein	+	138457	138925	468
ndhB	gene	nad-dehydrogenase	+	139190	141398	2208
trnL-CAA	gene	translation-rna	+	141958	142039	81
ycf15	gene	other	−	142294	142543	249
ycf2	gene	other	−	142633	149431	6798
trnI-CAU	gene	translation-rna	+	149519	149593	74
rpl23	gene	ribosomal-protein	+	149758	150040	282
rpl2	gene	ribosomal-protein	+	150058	151546	1488

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_086487.1DNA · accDNC_086487DNA · atpBNC_086487DNA · matKNC_086487DNA · ndhFNC_086487DNA · psbANC_086487DNA · rbcLNC_086487DNA · rps12NC_086487DNA · ycf1NC_086487