Coordinate-aware organelle record

Vitex negundo var. cannabifolia chloroplast genome

Available PQ541021.1 154,520 bp 128 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

128 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	8	82	74
psbA	gene	photosystem-ii	−	431	1490	1059
trnK-UUU	gene	translation-rna	−	1722	4301	2579
matK	gene	other	−	2021	3551	1530
rps16	gene	ribosomal-protein	−	5209	6353	1144
trnQ-UUG	gene	translation-rna	−	7594	7666	72
psbK	gene	photosystem-ii	+	7999	8185	186
psbI	gene	photosystem-ii	+	8567	8678	111
trnS-GCU	gene	translation-rna	−	8806	8894	88
trnG-UCC	gene	translation-rna	+	9615	10363	748
trnR-UCU	gene	translation-rna	+	10544	10616	72
ATPA	gene	atp-synthase	−	10719	12243	1524
ATPF	gene	atp-synthase	−	12323	13599	1276
ATPH	gene	atp-synthase	−	13998	14244	246
ATPI	gene	atp-synthase	−	15279	16023	744
rps2	gene	ribosomal-protein	−	16272	16983	711
rpoC2	gene	rna-polymerase	−	17218	21388	4170
rpoC1	gene	rna-polymerase	−	21554	24395	2841
rpoB	gene	rna-polymerase	−	24421	27610	3189
trnC-GCA	gene	translation-rna	+	28806	28877	71
petN	gene	cytochrome	+	29733	29823	90
psbM	gene	photosystem-ii	−	30828	30933	105
trnD-GUC	gene	translation-rna	−	31459	31533	74
trnY-GUA	gene	translation-rna	−	31641	31725	84
trnE-UUC	gene	translation-rna	−	31784	31857	73
trnT-GGU	gene	translation-rna	+	32283	32355	72
psbD	gene	photosystem-ii	+	33728	34790	1062
psbC	gene	photosystem-ii	+	34737	36159	1422
trnS-UGA	gene	translation-rna	−	36411	36504	93
psbZ	gene	photosystem-ii	+	36837	37026	189
trnG-GCC	gene	translation-rna	+	37295	37366	71
trnfM-CAU	gene	translation-rna	−	37523	37597	74
rps14	gene	ribosomal-protein	−	37746	38049	303
psaB	gene	photosystem-i	−	38171	40376	2205
psaA	gene	photosystem-i	−	40401	42654	2253
ycf3	gene	other	−	43387	45332	1945
trnS-GGA	gene	translation-rna	+	46125	46212	87
rps4	gene	ribosomal-protein	−	46493	47099	606
trnT-UGU	gene	translation-rna	−	47467	47540	73
trnL-UAA	gene	translation-rna	+	48204	48774	570
trnF-GAA	gene	translation-rna	+	49079	49152	73
ndhJ	gene	nad-dehydrogenase	−	49821	50298	477
ndhK	gene	nad-dehydrogenase	−	50404	51145	741
ndhC	gene	nad-dehydrogenase	−	51135	51498	363
trnV-UAC	gene	translation-rna	−	52535	53195	660
trnM-CAU	gene	translation-rna	+	53371	53444	73
ATPE	gene	atp-synthase	−	53670	54072	402
ATPB	gene	atp-synthase	−	54068	55565	1497
rbcL	gene	other	+	56371	57814	1443
accD	gene	other	+	58507	59989	1482
psaI	gene	photosystem-i	+	60714	60825	111
ycf4	gene	other	+	61265	61820	555
cemA	gene	other	+	62482	63172	690
petA	gene	cytochrome	+	63386	64349	963
psbJ	gene	photosystem-ii	−	65399	65522	123
psbL	gene	photosystem-ii	−	65655	65772	117
psbF	gene	photosystem-ii	−	65795	65915	120
psbE	gene	photosystem-ii	−	65929	66181	252
petL	gene	cytochrome	+	67112	67208	96
petG	gene	cytochrome	+	67382	67496	114
trnW-CCA	gene	translation-rna	−	67618	67692	74
trnP-UGG	gene	translation-rna	−	67847	67921	74
psaJ	gene	photosystem-i	+	68198	68333	135
rpl33	gene	ribosomal-protein	+	68811	69012	201
rps18	gene	ribosomal-protein	+	69180	69486	306
rpl20	gene	ribosomal-protein	−	69741	70128	387
rps12	gene	ribosomal-protein	−	70960	99354	28394
rps12	gene	ribosomal-protein	+	70960	141200	70240
psbB	gene	photosystem-ii	+	73661	75188	1527
psbT	gene	photosystem-ii	+	75387	75495	108
psbH	gene	photosystem-ii	+	75781	76021	240
petB	gene	cytochrome	+	76145	77533	1388
petD	gene	cytochrome	+	77721	78945	1224
rpoA	gene	rna-polymerase	−	79106	80126	1020
rps11	gene	ribosomal-protein	−	80197	80614	417
rpl36	gene	ribosomal-protein	−	80715	80829	114
infA	gene	other	−	80924	81158	234
rps8	gene	ribosomal-protein	−	81282	81687	405
rpl14	gene	ribosomal-protein	−	81869	82238	369
rpl16	gene	ribosomal-protein	−	82364	83700	1336
rps3	gene	ribosomal-protein	−	83833	84496	663
rpl22	gene	ribosomal-protein	−	84480	84948	468
rps19	gene	ribosomal-protein	−	84999	85278	279
rpl2	gene	ribosomal-protein	−	85339	86821	1482
rpl23	gene	ribosomal-protein	−	86839	87121	282
trnI-CAU	gene	translation-rna	−	87286	87360	74
ycf2	gene	other	+	87468	94332	6864
trnL-CAA	gene	translation-rna	−	94931	95012	81
ndhB	gene	nad-dehydrogenase	−	95559	97771	2212
rps7	gene	ribosomal-protein	−	98034	98502	468
trnV-GAC	gene	translation-rna	+	100952	101024	72
rrn16S	gene	ribosomal-rna	+	101251	102742	1491
trnI-GAU	gene	translation-rna	+	103040	104059	1019
trnA-UGC	gene	translation-rna	+	104123	105001	878
rrn23S	gene	ribosomal-rna	+	105169	107980	2811
rrn4.5S	gene	ribosomal-rna	+	108078	108181	103
rrn5S	gene	ribosomal-rna	+	108436	108557	121
trnR-ACG	gene	translation-rna	+	108800	108874	74
trnN-GUU	gene	translation-rna	−	109443	109515	72
ndhF	gene	nad-dehydrogenase	−	110891	113138	2247
rpl32	gene	ribosomal-protein	+	113675	113852	177
trnL-UAG	gene	translation-rna	+	114658	114738	80
ccsA	gene	other	+	114828	115815	987
ndhD	gene	nad-dehydrogenase	−	116081	117581	1500
psaC	gene	photosystem-i	−	117709	117955	246
ndhE	gene	nad-dehydrogenase	−	118217	118523	306
ndhG	gene	nad-dehydrogenase	−	118736	119267	531
ndhI	gene	nad-dehydrogenase	−	119623	120130	507
ndhA	gene	nad-dehydrogenase	−	120212	122394	2182
ndhH	gene	nad-dehydrogenase	−	122395	123577	1182
rps15	gene	ribosomal-protein	−	123675	123948	273
ycf1	gene	other	−	124362	129909	5547
trnN-GUU	gene	translation-rna	+	130240	130312	72
trnR-ACG	gene	translation-rna	−	130881	130955	74
rrn5S	gene	ribosomal-rna	−	131198	131319	121
rrn4.5S	gene	ribosomal-rna	−	131574	131677	103
rrn23S	gene	ribosomal-rna	−	131775	134586	2811
trnA-UGC	gene	translation-rna	−	134754	135632	878
trnI-GAU	gene	translation-rna	−	135696	136715	1019
rrn16S	gene	ribosomal-rna	−	137013	138504	1491
trnV-GAC	gene	translation-rna	−	138731	138803	72
rps7	gene	ribosomal-protein	+	141253	141721	468
ndhB	gene	nad-dehydrogenase	+	141984	144196	2212
trnL-CAA	gene	translation-rna	+	144743	144824	81
ycf2	gene	other	−	145423	152287	6864
trnI-CAU	gene	translation-rna	+	152395	152469	74
rpl23	gene	ribosomal-protein	+	152634	152916	282
rpl2	gene	ribosomal-protein	+	152934	154416	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ541021.1DNA · accDPQ541021DNA · atpBPQ541021DNA · matKPQ541021DNA · ndhFPQ541021DNA · psbAPQ541021DNA · rbcLPQ541021DNA · rps12PQ541021DNA · ycf1PQ541021