Coordinate-aware organelle record

Ajuga macrosperma chloroplast genome

Available NC_084166.1 150,362 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	78	75
psbA	gene	photosystem-ii	−	401	1460	1059
trnK-UUU	gene	translation-rna	−	1692	4263	2571
matK	gene	other	−	1960	3523	1563
rps16	gene	ribosomal-protein	−	5156	6301	1145
trnQ-UUG	gene	translation-rna	−	7122	7194	72
psbK	gene	photosystem-ii	+	7531	7717	186
psbI	gene	photosystem-ii	+	8096	8207	111
trnS-GCU	gene	translation-rna	−	8321	8409	88
trnG-UCC	gene	translation-rna	+	9110	9871	761
trnR-UCU	gene	translation-rna	+	10056	10128	72
atpA	gene	atp-synthase	−	10233	11757	1524
atpF	gene	atp-synthase	−	11871	13111	1240
atpH	gene	atp-synthase	−	13469	13715	246
atpI	gene	atp-synthase	−	14682	15426	744
rps2	gene	ribosomal-protein	−	15641	16352	711
rpoC2	gene	rna-polymerase	−	16585	20716	4131
rpoC1	gene	rna-polymerase	−	20888	23739	2851
rpoB	gene	rna-polymerase	−	23765	26978	3213
trnC-GCA	gene	translation-rna	+	28151	28222	71
petN	gene	cytochrome	+	28529	28619	90
psbM	gene	photosystem-ii	−	29158	29263	105
trnD-GUC	gene	translation-rna	−	29777	29851	74
trnY-GUA	gene	translation-rna	−	29950	30034	84
trnE-UUC	gene	translation-rna	−	30093	30166	73
trnT-GGU	gene	translation-rna	+	30572	30644	72
psbD	gene	photosystem-ii	+	31946	33008	1062
psbC	gene	photosystem-ii	+	32955	34377	1422
trnS-UGA	gene	translation-rna	−	34631	34724	93
psbZ	gene	photosystem-ii	+	35049	35238	189
trnG-GCC	gene	translation-rna	+	35505	35576	71
trnfM-CAU	gene	translation-rna	−	35754	35828	74
rps14	gene	ribosomal-protein	−	35972	36275	303
psaB	gene	photosystem-i	−	36397	38602	2205
psaA	gene	photosystem-i	−	38627	40880	2253
pafI	gene	other	−	41602	43526	1924
trnS-GGA	gene	translation-rna	+	43947	44034	87
rps4	gene	ribosomal-protein	−	44343	44949	606
trnT-UGU	gene	translation-rna	−	45290	45363	73
trnL-UAA	gene	translation-rna	+	46000	46566	566
trnF-GAA	gene	translation-rna	+	46864	46937	73
ndhJ	gene	nad-dehydrogenase	−	47582	48059	477
ndhK	gene	nad-dehydrogenase	−	48159	48843	684
ndhC	gene	nad-dehydrogenase	−	48895	49258	363
trnV-UAC	gene	translation-rna	−	50092	50759	667
trnM-CAU	gene	translation-rna	+	50939	51012	73
atpE	gene	atp-synthase	−	51211	51613	402
atpB	gene	atp-synthase	−	51609	53106	1497
rbcL	gene	other	+	53908	55357	1449
accD	gene	other	+	56090	57566	1476
psaI	gene	photosystem-i	+	57996	58107	111
pafII	gene	other	+	58518	59073	555
cemA	gene	other	+	59725	60415	690
petA	gene	cytochrome	+	60648	61611	963
psbJ	gene	photosystem-ii	−	62504	62627	123
psbL	gene	photosystem-ii	−	62768	62885	117
psbF	gene	photosystem-ii	−	62908	63028	120
psbE	gene	photosystem-ii	−	63042	63294	252
petL	gene	cytochrome	+	64183	64279	96
petG	gene	cytochrome	+	64448	64562	114
trnW-CCA	gene	translation-rna	−	64686	64760	74
trnP-UGG	gene	translation-rna	−	64921	64995	74
psaJ	gene	photosystem-i	+	65286	65421	135
rpl33	gene	ribosomal-protein	+	65892	66093	201
rps18	gene	ribosomal-protein	+	66274	66580	306
rpl20	gene	ribosomal-protein	−	66827	67214	387
rps12	gene	ribosomal-protein	−	68053	96120	28067
rps12	gene	ribosomal-protein	+	68053	137124	69071
psbB	gene	photosystem-ii	+	70694	72221	1527
psbT	gene	photosystem-ii	+	72396	72498	102
psbH	gene	photosystem-ii	+	72800	73022	222
petB	gene	cytochrome	+	73138	74471	1333
petD	gene	cytochrome	+	74664	75879	1215
rpoA	gene	rna-polymerase	−	76064	77078	1014
rps11	gene	ribosomal-protein	−	77149	77566	417
rpl36	gene	ribosomal-protein	−	77667	77781	114
infA	gene	other	−	77876	78110	234
rps8	gene	ribosomal-protein	−	78243	78648	405
rpl14	gene	ribosomal-protein	−	78818	79187	369
rpl16	gene	ribosomal-protein	−	79314	80553	1239
rps3	gene	ribosomal-protein	−	80710	81361	651
rpl22	gene	ribosomal-protein	−	81345	81813	468
rps19	gene	ribosomal-protein	−	81867	82146	279
rpl2	gene	ribosomal-protein	−	82198	83687	1489
rpl23	gene	ribosomal-protein	−	83705	83987	282
trnI-CAU	gene	translation-rna	−	84152	84226	74
ycf2	gene	other	+	84314	91079	6765
ycf15	gene	other	+	91220	91418	198
trnL-CAA	gene	translation-rna	−	91685	91766	81
ndhB	gene	nad-dehydrogenase	−	92314	94527	2213
rps7	gene	ribosomal-protein	−	94802	95270	468
trnV-GAC	gene	translation-rna	+	97698	97770	72
rrn16S	gene	ribosomal-rna	+	97999	99490	1491
trnI-GAU	gene	translation-rna	+	99788	100808	1020
trnA-UGC	gene	translation-rna	+	100867	101744	877
rrn23S	gene	ribosomal-rna	+	101905	104724	2819
rrn4.5S	gene	ribosomal-rna	+	104822	104925	103
rrn5S	gene	ribosomal-rna	+	105154	105275	121
trnR-ACG	gene	translation-rna	+	105519	105593	74
trnN-GUU	gene	translation-rna	−	106152	106224	72
ycf1	gene	other	+	106565	107720	1155
ndhF	gene	nad-dehydrogenase	−	107610	109851	2241
rpl32	gene	ribosomal-protein	+	110387	110564	177
trnL-UAG	gene	translation-rna	+	110963	111043	80
ccsA	gene	other	+	111136	112108	972
ndhD	gene	nad-dehydrogenase	−	112362	113892	1530
psaC	gene	photosystem-i	−	113984	114230	246
ndhE	gene	nad-dehydrogenase	−	114487	114793	306
ndhG	gene	nad-dehydrogenase	−	115026	115557	531
ndhI	gene	nad-dehydrogenase	−	115894	116401	507
ndhA	gene	nad-dehydrogenase	−	116476	118540	2064
ndhH	gene	nad-dehydrogenase	−	118541	119723	1182
rps15	gene	ribosomal-protein	−	119819	120092	273
ycf1	gene	other	−	120467	125882	5415
trnN-GUU	gene	translation-rna	+	126223	126295	72
trnR-ACG	gene	translation-rna	−	126854	126928	74
rrn5S	gene	ribosomal-rna	−	127172	127293	121
rrn4.5S	gene	ribosomal-rna	−	127522	127625	103
rrn23S	gene	ribosomal-rna	−	127723	130542	2819
trnA-UGC	gene	translation-rna	−	130703	131580	877
trnI-GAU	gene	translation-rna	−	131639	132659	1020
rrn16S	gene	ribosomal-rna	−	132957	134448	1491
trnV-GAC	gene	translation-rna	−	134677	134749	72
rps7	gene	ribosomal-protein	+	137177	137645	468
ndhB	gene	nad-dehydrogenase	+	137920	140133	2213
trnL-CAA	gene	translation-rna	+	140681	140762	81
ycf15	gene	other	−	141029	141227	198
ycf2	gene	other	−	141368	148133	6765
trnI-CAU	gene	translation-rna	+	148221	148295	74
rpl23	gene	ribosomal-protein	+	148460	148742	282
rpl2	gene	ribosomal-protein	+	148760	150249	1489

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_084166.1DNA · accDNC_084166DNA · atpBNC_084166DNA · matKNC_084166DNA · ndhFNC_084166DNA · psbANC_084166DNA · rbcLNC_084166DNA · rps12NC_084166DNA · ycf1NC_084166