Coordinate-aware organelle record

Callicarpa cathayana chloroplast genome

Available NC_063508.1 154,182 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	425	1484	1059
trnK-UUU	gene	translation-rna	−	1736	4309	2573
matK	gene	other	−	2043	3567	1524
rps16	gene	ribosomal-protein	−	5180	6314	1134
trnQ-UUG	gene	translation-rna	−	7469	7541	72
psbK	gene	photosystem-ii	+	7870	8056	186
psbI	gene	photosystem-ii	+	8447	8558	111
trnS-GCU	gene	translation-rna	−	8675	8763	88
trnS-CGA	gene	translation-rna	+	9489	10251	762
trnR-UCU	gene	translation-rna	+	10427	10499	72
atpA	gene	atp-synthase	−	10603	12127	1524
atpF	gene	atp-synthase	−	12194	13441	1247
atpH	gene	atp-synthase	−	13811	14057	246
atpI	gene	atp-synthase	−	15065	15809	744
rps2	gene	ribosomal-protein	−	16039	16750	711
rpoC2	gene	rna-polymerase	−	16966	21148	4182
rpoC1	gene	rna-polymerase	−	21302	24128	2826
rpoB	gene	rna-polymerase	−	24154	27367	3213
trnC-GCA	gene	translation-rna	+	28542	28613	71
petN	gene	cytochrome	+	29444	29534	90
psbM	gene	photosystem-ii	−	30456	30561	105
trnD-GUC	gene	translation-rna	−	31082	31156	74
trnY-GUA	gene	translation-rna	−	31264	31348	84
trnE-UUC	gene	translation-rna	−	31407	31480	73
trnT-GGU	gene	translation-rna	+	32036	32108	72
psbD	gene	photosystem-ii	+	33487	34549	1062
psbC	gene	photosystem-ii	+	34496	35918	1422
trnS-UGA	gene	translation-rna	−	36159	36252	93
psbZ	gene	photosystem-ii	+	36581	36770	189
trnG-GCC	gene	translation-rna	+	37045	37116	71
trnM-CAU	gene	translation-rna	−	37267	37341	74
rps14	gene	ribosomal-protein	−	37490	37793	303
psaB	gene	photosystem-i	−	37915	40120	2205
psaA	gene	photosystem-i	−	40145	42398	2253
ycf3	gene	other	−	43106	45061	1955
trnS-GGA	gene	translation-rna	+	45896	45983	87
rps4	gene	ribosomal-protein	−	46263	46869	606
trnT-UGU	gene	translation-rna	−	47235	47308	73
trnL-UAA	gene	translation-rna	+	47982	48555	573
trnF-GAA	gene	translation-rna	+	48900	48973	73
ndhJ	gene	nad-dehydrogenase	−	49622	50099	477
ndhK	gene	nad-dehydrogenase	−	50199	50877	678
ndhC	gene	nad-dehydrogenase	−	50930	51293	363
trnM-CAU	gene	translation-rna	+	53315	53388	73
atpE	gene	atp-synthase	−	53595	53997	402
atpB	gene	atp-synthase	−	53993	55490	1497
rbcL	gene	other	+	56275	57715	1440
accD	gene	other	+	58381	59875	1494
psaI	gene	photosystem-i	+	60577	60688	111
ycf4	gene	other	+	61127	61682	555
cemA	gene	other	+	62329	63019	690
petA	gene	cytochrome	+	63208	64171	963
psbJ	gene	photosystem-ii	−	65097	65220	123
psbL	gene	photosystem-ii	−	65353	65470	117
psbF	gene	photosystem-ii	−	65493	65613	120
psbE	gene	photosystem-ii	−	65627	65879	252
petL	gene	cytochrome	+	66810	66906	96
petG	gene	cytochrome	+	67080	67194	114
trnW-CCA	gene	translation-rna	−	67316	67390	74
trnP-UGG	gene	translation-rna	−	67551	67625	74
psaJ	gene	photosystem-i	+	68016	68151	135
rpl33	gene	ribosomal-protein	+	68630	68831	201
rps18	gene	ribosomal-protein	+	69001	69307	306
rpl20	gene	ribosomal-protein	−	69541	69928	387
rps12	gene	ribosomal-protein	−	70754	99059	28305
rps12	gene	ribosomal-protein	+	70754	140872	70118
clpP	gene	other	−	71025	72974	1949
psbB	gene	photosystem-ii	+	73428	74955	1527
psbT	gene	photosystem-ii	+	75147	75255	108
psbN	gene	photosystem-ii	−	75315	75447	132
psbH	gene	photosystem-ii	+	75552	75774	222
petB	gene	cytochrome	+	75898	77278	1380
petD	gene	cytochrome	+	77466	78691	1225
rpoA	gene	rna-polymerase	−	78867	79881	1014
rps11	gene	ribosomal-protein	−	79952	80369	417
rpl36	gene	ribosomal-protein	−	80470	80584	114
infA	gene	other	−	80679	80913	234
rps8	gene	ribosomal-protein	−	81037	81442	405
rpl14	gene	ribosomal-protein	−	81614	81983	369
rpl16	gene	ribosomal-protein	−	82109	83405	1296
rps3	gene	ribosomal-protein	−	83547	84210	663
rpl22	gene	ribosomal-protein	−	84219	84657	438
rps19	gene	ribosomal-protein	−	84716	84995	279
rpl2	gene	ribosomal-protein	−	85050	86542	1492
rpl23	gene	ribosomal-protein	−	86560	86842	282
trnM-CAU	gene	translation-rna	−	87007	87081	74
ycf2	gene	other	+	87179	94040	6861
ycf15	gene	other	+	94172	94370	198
trnL-CAA	gene	translation-rna	−	94630	94711	81
ndhB	gene	nad-dehydrogenase	−	95258	97470	2212
rps7	gene	ribosomal-protein	−	97744	98212	468
trnV-GAC	gene	translation-rna	+	100666	100738	72
rrn16S	gene	ribosomal-rna	+	100983	102474	1491
trnI	gene	translation-rna	+	102772	103793	1021
trnA-UGC	gene	translation-rna	+	103857	104743	886
rrn23S	gene	ribosomal-rna	+	104911	107722	2811
rrn4.5S	gene	ribosomal-rna	+	107819	107922	103
rrn5S	gene	ribosomal-rna	+	108177	108298	121
trnR-ACG	gene	translation-rna	+	108541	108615	74
trnN-GUU	gene	translation-rna	−	109184	109256	72
ndhF	gene	nad-dehydrogenase	−	110660	112904	2244
rpl32	gene	ribosomal-protein	+	113422	113599	177
trnL-UAG	gene	translation-rna	+	114380	114460	80
ccsA	gene	other	+	114544	115516	972
ndhD	gene	nad-dehydrogenase	−	115782	117282	1500
psaC	gene	photosystem-i	−	117405	117651	246
ndhE	gene	nad-dehydrogenase	−	117901	118207	306
ndhG	gene	nad-dehydrogenase	−	118420	118951	531
ndhI	gene	nad-dehydrogenase	−	119299	119806	507
ndhA	gene	nad-dehydrogenase	−	119881	122066	2185
ndhH	gene	nad-dehydrogenase	−	122067	123249	1182
rps15	gene	ribosomal-protein	−	123345	123618	273
ycf1	gene	other	−	123999	129552	5553
trnN-GUU	gene	translation-rna	+	129881	129953	72
trnR-ACG	gene	translation-rna	−	130522	130596	74
rrn5S	gene	ribosomal-rna	−	130839	130960	121
rrn4.5S	gene	ribosomal-rna	−	131215	131318	103
rrn23S	gene	ribosomal-rna	−	131415	134226	2811
trnA-UGC	gene	translation-rna	−	134394	135280	886
trnI	gene	translation-rna	−	135344	136365	1021
rrn16S	gene	ribosomal-rna	−	136663	138154	1491
trnV-GAC	gene	translation-rna	−	138399	138471	72
rps7	gene	ribosomal-protein	+	140925	141393	468
ndhB	gene	nad-dehydrogenase	+	141667	143879	2212
trnL-CAA	gene	translation-rna	+	144426	144507	81
ycf15	gene	other	−	144767	144965	198
ycf2	gene	other	−	145097	151958	6861
trnM-CAU	gene	translation-rna	+	152056	152130	74
rpl23	gene	ribosomal-protein	+	152295	152577	282
rpl2	gene	ribosomal-protein	+	152595	154087	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_063508.1DNA · accDNC_063508DNA · atpBNC_063508DNA · matKNC_063508DNA · ndhFNC_063508DNA · psbANC_063508DNA · rbcLNC_063508DNA · rps12NC_063508DNA · ycf1NC_063508