Coordinate-aware organelle record

Callicarpa dichotoma chloroplast genome

Available LC775283.1 154,110 bp 137 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

137 features

Gene	Type	Group	Strand	Start	End	Length
trnH	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	402	1461	1059
trnK	gene	translation-rna	−	1714	4286	2572
trnK	gene	translation-rna	−	1749	4249	2500
matK	gene	other	−	2020	3544	1524
rps16	CDS	ribosomal-protein	−	5146	6280	1134
trnQ	gene	translation-rna	−	7421	7493	72
psbK	gene	photosystem-ii	+	7822	8008	186
psbI	gene	photosystem-ii	+	8398	8509	111
trnS	gene	translation-rna	−	8627	8715	88
trnG	gene	translation-rna	+	9403	10163	760
trnR	gene	translation-rna	+	10340	10412	72
atpA	gene	atp-synthase	−	10516	12040	1524
atpF	CDS	atp-synthase	−	12107	13354	1247
atpH	gene	atp-synthase	−	13720	13966	246
atpI	gene	atp-synthase	−	14982	15726	744
rps2	gene	ribosomal-protein	−	15956	16667	711
rpoC2	gene	rna-polymerase	−	16895	21077	4182
rpoC1	CDS	rna-polymerase	−	21231	24057	2826
rpoB	gene	rna-polymerase	−	24083	27296	3213
trnC	gene	translation-rna	+	28471	28542	71
petN	gene	cytochrome	+	29373	29463	90
psbM	gene	photosystem-ii	−	30398	30503	105
trnD	gene	translation-rna	−	31039	31113	74
trnY	gene	translation-rna	−	31221	31305	84
trnE	gene	translation-rna	−	31364	31437	73
trnT	gene	translation-rna	+	32003	32075	72
psbD	gene	photosystem-ii	+	33456	34518	1062
psbC	gene	photosystem-ii	+	34465	35887	1422
trnS	gene	translation-rna	−	36129	36222	93
psbZ	gene	photosystem-ii	+	36551	36740	189
trnG	gene	translation-rna	+	37015	37086	71
trnfM	gene	translation-rna	−	37239	37313	74
rps14	gene	ribosomal-protein	−	37462	37765	303
psaB	gene	photosystem-i	−	37887	40092	2205
psaA	gene	photosystem-i	−	40117	42370	2253
ycf3	gene	other	−	43084	44902	1818
ycf3	gene	other	−	43084	45031	1947
ycf3	gene	other	−	44902	45031	129
trnS	gene	translation-rna	+	45866	45953	87
rps4	gene	ribosomal-protein	−	46233	46839	606
trnT	gene	translation-rna	−	47203	47276	73
trnL	gene	translation-rna	+	47945	48521	576
trnF	gene	translation-rna	+	48862	48935	73
ndhJ	gene	nad-dehydrogenase	−	49577	50054	477
ndhK	gene	nad-dehydrogenase	−	50154	50832	678
ndhC	gene	nad-dehydrogenase	−	50885	51248	363
trnV	gene	translation-rna	−	52436	53089	653
trnM	gene	translation-rna	+	53270	53343	73
atpE	gene	atp-synthase	−	53550	53952	402
atpB	gene	atp-synthase	−	53948	55445	1497
rbcL	gene	other	+	56228	57668	1440
accD	gene	other	+	58312	59857	1545
psaI	gene	photosystem-i	+	60558	60669	111
ycf4	gene	other	+	61108	61663	555
cemA	gene	other	+	62310	63000	690
petA	gene	cytochrome	+	63189	64152	963
psbJ	gene	photosystem-ii	−	65101	65224	123
psbL	gene	photosystem-ii	−	65357	65474	117
psbF	gene	photosystem-ii	−	65497	65617	120
psbE	gene	photosystem-ii	−	65631	65883	252
petL	gene	cytochrome	+	66816	66912	96
petG	gene	cytochrome	+	67086	67200	114
trnW	gene	translation-rna	−	67322	67396	74
trnP	gene	translation-rna	−	67558	67632	74
psaJ	gene	photosystem-i	+	68022	68157	135
rpl33	gene	ribosomal-protein	+	68630	68831	201
rps18	gene	ribosomal-protein	+	69001	69307	306
rpl20	gene	ribosomal-protein	−	69541	69928	387
rps12	gene	ribosomal-protein	+	70746	140801	70055
clpP	gene	other	−	70993	72943	1950
psbB	gene	photosystem-ii	+	73404	74931	1527
psbT	gene	photosystem-ii	+	75122	75230	108
psbN	gene	photosystem-ii	−	75290	75422	132
psbH	gene	photosystem-ii	+	75509	75749	240
petB	gene	cytochrome	+	75873	77250	1377
petD	gene	cytochrome	+	77438	78655	1217
rpoA	gene	rna-polymerase	−	78831	79845	1014
rps11	gene	ribosomal-protein	−	79916	80333	417
rpl36	gene	ribosomal-protein	−	80434	80548	114
infA	gene	other	−	80643	80877	234
rps8	gene	ribosomal-protein	−	81001	81406	405
rpl14	gene	ribosomal-protein	−	81579	81948	369
rpl16	gene	ribosomal-protein	−	82074	83365	1291
rps3	gene	ribosomal-protein	−	83507	84170	663
rpl22	gene	ribosomal-protein	−	84179	84617	438
rps19	gene	ribosomal-protein	−	84676	84955	279
rpl2	gene	ribosomal-protein	−	85009	86501	1492
rpl23	gene	ribosomal-protein	−	86519	86801	282
trnI	gene	translation-rna	−	86966	87040	74
ycf2	gene	other	+	87138	93999	6861
ycf15	gene	other	+	94131	94329	198
trnL	gene	translation-rna	−	94589	94670	81
ndhB	gene	nad-dehydrogenase	−	95217	97429	2212
rps7	gene	ribosomal-protein	−	97703	98171	468
trnV	gene	translation-rna	+	100624	100696	72
rrn16	gene	ribosomal-rna	+	100941	102432	1491
trnI	gene	translation-rna	+	102730	103751	1021
trnA	gene	translation-rna	+	103815	104702	887
rrn23	gene	ribosomal-rna	+	104870	107681	2811
rrn4.5	gene	ribosomal-rna	+	107778	107881	103
rrn5	gene	ribosomal-rna	+	108136	108257	121
trnR	gene	translation-rna	+	108495	108574	79
trnN	gene	translation-rna	−	109143	109215	72
ycf1	gene	other	+	109439	115103	5664
rps15	gene	ribosomal-protein	+	115484	115757	273
ndhH	gene	nad-dehydrogenase	+	115853	117035	1182
ndhA	gene	nad-dehydrogenase	+	117036	119222	2186
ndhI	gene	nad-dehydrogenase	+	119297	119804	507
ndhG	gene	nad-dehydrogenase	+	120145	120676	531
ndhE	gene	nad-dehydrogenase	+	120880	121186	306
psaC	gene	photosystem-i	+	121436	121682	246
ndhD	gene	nad-dehydrogenase	+	121802	123305	1503
ccsA	gene	other	−	123564	124536	972
trnL	gene	translation-rna	−	124621	124701	80
rpl32	gene	ribosomal-protein	−	125464	125641	177
ndhF	gene	nad-dehydrogenase	+	126156	128400	2244
ycf1	gene	other	−	128404	129586	1182
trnN	gene	translation-rna	+	129810	129882	72
trnR	gene	translation-rna	−	130451	130530	79
rrn5	gene	ribosomal-rna	−	130768	130889	121
rrn4.5	gene	ribosomal-rna	−	131144	131247	103
rrn23	gene	ribosomal-rna	−	131344	134155	2811
trnA	gene	translation-rna	−	134323	135210	887
trnI	gene	translation-rna	−	135274	136295	1021
rrn16	gene	ribosomal-rna	−	136593	138084	1491
trnV	gene	translation-rna	−	138329	138401	72
rps12	gene	ribosomal-protein	+	140007	140801	794
rps7	gene	ribosomal-protein	+	140854	141322	468
ndhB	gene	nad-dehydrogenase	+	141596	143808	2212
trnL	gene	translation-rna	+	144355	144436	81
ycf15	gene	other	−	144696	144894	198
ycf2	gene	other	−	145026	151887	6861
trnI	gene	translation-rna	+	151985	152059	74
rpl23	gene	ribosomal-protein	+	152224	152506	282
rpl2	gene	ribosomal-protein	+	152524	154016	1492
rps19	gene	ribosomal-protein	+	154070	154110	40

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeLC775283.1DNA · accDLC775283DNA · atpBLC775283DNA · matKLC775283DNA · ndhFLC775283DNA · psbALC775283DNA · rbcLLC775283DNA · rps12LC775283DNA · ycf1LC775283