Coordinate-aware organelle record

Callicarpa kochiana chloroplast genome

Available NC_063509.1 154,181 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	426	1485	1059
trnK-UUU	gene	translation-rna	−	1738	4311	2573
matK	gene	other	−	2045	3569	1524
rps16	gene	ribosomal-protein	−	5170	6304	1134
trnQ-UUG	gene	translation-rna	−	7445	7517	72
psbK	gene	photosystem-ii	+	7850	8036	186
psbI	gene	photosystem-ii	+	8425	8536	111
trnS-GCU	gene	translation-rna	−	8653	8741	88
trnS-CGA	gene	translation-rna	+	9447	10209	762
trnR-UCU	gene	translation-rna	+	10385	10457	72
atpA	gene	atp-synthase	−	10561	12085	1524
atpF	gene	atp-synthase	−	12152	13402	1250
atpH	gene	atp-synthase	−	13769	14015	246
atpI	gene	atp-synthase	−	15030	15774	744
rps2	gene	ribosomal-protein	−	16004	16715	711
rpoC2	gene	rna-polymerase	−	16930	21112	4182
rpoC1	gene	rna-polymerase	−	21266	24092	2826
rpoB	gene	rna-polymerase	−	24118	27331	3213
trnC-GCA	gene	translation-rna	+	28506	28577	71
petN	gene	cytochrome	+	29408	29498	90
psbM	gene	photosystem-ii	−	30408	30513	105
trnD-GUC	gene	translation-rna	−	31049	31123	74
trnY-GUA	gene	translation-rna	−	31231	31315	84
trnE-UUC	gene	translation-rna	−	31374	31447	73
trnT-GGU	gene	translation-rna	+	32003	32075	72
psbD	gene	photosystem-ii	+	33454	34516	1062
psbC	gene	photosystem-ii	+	34463	35885	1422
trnS-UGA	gene	translation-rna	−	36126	36219	93
psbZ	gene	photosystem-ii	+	36548	36737	189
trnG-GCC	gene	translation-rna	+	37012	37083	71
trnM-CAU	gene	translation-rna	−	37234	37308	74
rps14	gene	ribosomal-protein	−	37457	37760	303
psaB	gene	photosystem-i	−	37882	40087	2205
psaA	gene	photosystem-i	−	40112	42365	2253
ycf3	gene	other	−	43078	45028	1950
trnS-GGA	gene	translation-rna	+	45863	45950	87
rps4	gene	ribosomal-protein	−	46230	46836	606
trnT-UGU	gene	translation-rna	−	47202	47275	73
trnL-UAA	gene	translation-rna	+	47947	48520	573
trnF-GAA	gene	translation-rna	+	48861	48934	73
ndhJ	gene	nad-dehydrogenase	−	49581	50058	477
ndhK	gene	nad-dehydrogenase	−	50158	50836	678
ndhC	gene	nad-dehydrogenase	−	50889	51252	363
trnM-CAU	gene	translation-rna	+	53276	53349	73
atpE	gene	atp-synthase	−	53556	53958	402
atpB	gene	atp-synthase	−	53954	55451	1497
rbcL	gene	other	+	56236	57676	1440
accD	gene	other	+	58362	59856	1494
psaI	gene	photosystem-i	+	60557	60668	111
ycf4	gene	other	+	61106	61661	555
cemA	gene	other	+	62308	62998	690
petA	gene	cytochrome	+	63187	64150	963
psbJ	gene	photosystem-ii	−	65086	65209	123
psbL	gene	photosystem-ii	−	65342	65459	117
psbF	gene	photosystem-ii	−	65482	65602	120
psbE	gene	photosystem-ii	−	65616	65868	252
petL	gene	cytochrome	+	66797	66893	96
petG	gene	cytochrome	+	67067	67181	114
trnW-CCA	gene	translation-rna	−	67303	67377	74
trnP-UGG	gene	translation-rna	−	67539	67613	74
psaJ	gene	photosystem-i	+	68004	68139	135
rpl33	gene	ribosomal-protein	+	68618	68819	201
rps18	gene	ribosomal-protein	+	68989	69295	306
rpl20	gene	ribosomal-protein	−	69530	69917	387
rps12	gene	ribosomal-protein	−	70735	99014	28279
rps12	gene	ribosomal-protein	+	70735	140871	70136
clpP	gene	other	−	70982	72930	1948
psbB	gene	photosystem-ii	+	73391	74918	1527
psbT	gene	photosystem-ii	+	75110	75218	108
psbN	gene	photosystem-ii	−	75278	75410	132
psbH	gene	photosystem-ii	+	75515	75737	222
petB	gene	cytochrome	+	75861	77239	1378
petD	gene	cytochrome	+	77427	78644	1217
rpoA	gene	rna-polymerase	−	78820	79834	1014
rps11	gene	ribosomal-protein	−	79905	80322	417
rpl36	gene	ribosomal-protein	−	80423	80537	114
infA	gene	other	−	80632	80866	234
rps8	gene	ribosomal-protein	−	80990	81395	405
rpl14	gene	ribosomal-protein	−	81568	81937	369
rpl16	gene	ribosomal-protein	−	82063	83360	1297
rps3	gene	ribosomal-protein	−	83502	84165	663
rpl22	gene	ribosomal-protein	−	84174	84612	438
rps19	gene	ribosomal-protein	−	84671	84950	279
rpl2	gene	ribosomal-protein	−	85005	86497	1492
rpl23	gene	ribosomal-protein	−	86515	86797	282
trnM-CAU	gene	translation-rna	−	86962	87036	74
ycf2	gene	other	+	87134	93995	6861
ycf15	gene	other	+	94127	94325	198
trnL-CAA	gene	translation-rna	−	94585	94666	81
ndhB	gene	nad-dehydrogenase	−	95213	97425	2212
rps7	gene	ribosomal-protein	−	97699	98167	468
trnV-GAC	gene	translation-rna	+	100620	100692	72
rrn16S	gene	ribosomal-rna	+	100937	102428	1491
trnI	gene	translation-rna	+	102726	103747	1021
trnA-UGC	gene	translation-rna	+	103811	104698	887
rrn23S	gene	ribosomal-rna	+	104866	107677	2811
rrn4.5S	gene	ribosomal-rna	+	107774	107877	103
rrn5S	gene	ribosomal-rna	+	108132	108253	121
trnR-ACG	gene	translation-rna	+	108496	108570	74
trnN-GUU	gene	translation-rna	−	109139	109211	72
ndhF	gene	nad-dehydrogenase	−	110628	112872	2244
rpl32	gene	ribosomal-protein	+	113391	113568	177
trnL-UAG	gene	translation-rna	+	114349	114429	80
ccsA	gene	other	+	114512	115484	972
ndhD	gene	nad-dehydrogenase	−	115750	117250	1500
psaC	gene	photosystem-i	−	117373	117619	246
ndhE	gene	nad-dehydrogenase	−	117869	118175	306
ndhG	gene	nad-dehydrogenase	−	118388	118919	531
ndhI	gene	nad-dehydrogenase	−	119267	119774	507
ndhA	gene	nad-dehydrogenase	−	119849	122026	2177
ndhH	gene	nad-dehydrogenase	−	122027	123209	1182
rps15	gene	ribosomal-protein	−	123305	123578	273
ycf1	gene	other	−	123959	129551	5592
trnN-GUU	gene	translation-rna	+	129880	129952	72
trnR-ACG	gene	translation-rna	−	130521	130595	74
rrn5S	gene	ribosomal-rna	−	130838	130959	121
rrn4.5S	gene	ribosomal-rna	−	131214	131317	103
rrn23S	gene	ribosomal-rna	−	131414	134225	2811
trnA-UGC	gene	translation-rna	−	134393	135280	887
trnI	gene	translation-rna	−	135344	136365	1021
rrn16S	gene	ribosomal-rna	−	136663	138154	1491
trnV-GAC	gene	translation-rna	−	138399	138471	72
rps7	gene	ribosomal-protein	+	140924	141392	468
ndhB	gene	nad-dehydrogenase	+	141666	143878	2212
trnL-CAA	gene	translation-rna	+	144425	144506	81
ycf15	gene	other	−	144766	144964	198
ycf2	gene	other	−	145096	151957	6861
trnM-CAU	gene	translation-rna	+	152055	152129	74
rpl23	gene	ribosomal-protein	+	152294	152576	282
rpl2	gene	ribosomal-protein	+	152594	154086	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_063509.1DNA · accDNC_063509DNA · atpBNC_063509DNA · matKNC_063509DNA · ndhFNC_063509DNA · psbANC_063509DNA · rbcLNC_063509DNA · rps12NC_063509DNA · ycf1NC_063509