Coordinate-aware organelle record

Callicarpa nudiflora chloroplast genome

Available PV929844.1 154,160 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	1	75	74
psbA	gene	photosystem-ii	−	420	1479	1059
trnK-UUU	gene	translation-rna	−	1731	4304	2573
matK	gene	other	−	2038	3562	1524
rps16	gene	ribosomal-protein	−	5165	6299	1134
trnQ-UUG	gene	translation-rna	−	7439	7511	72
psbK	gene	photosystem-ii	+	7844	8030	186
psbI	gene	photosystem-ii	+	8419	8530	111
trnS-GCU	gene	translation-rna	−	8648	8736	88
trnS-CGA	gene	translation-rna	+	9423	10185	762
trnR-UCU	gene	translation-rna	+	10361	10433	72
atpA	gene	atp-synthase	−	10537	12061	1524
atpF	gene	atp-synthase	−	12128	13375	1247
atpH	gene	atp-synthase	−	13741	13987	246
atpI	gene	atp-synthase	−	15001	15745	744
rps2	gene	ribosomal-protein	−	15975	16686	711
rpoC2	gene	rna-polymerase	−	16902	21084	4182
rpoC1	gene	rna-polymerase	−	21238	24064	2826
rpoB	gene	rna-polymerase	−	24090	27303	3213
trnC-GCA	gene	translation-rna	+	28478	28549	71
petN	gene	cytochrome	+	29380	29470	90
psbM	gene	photosystem-ii	−	30379	30484	105
trnD-GUC	gene	translation-rna	−	31020	31094	74
trnY-GUA	gene	translation-rna	−	31202	31286	84
trnE-UUC	gene	translation-rna	−	31345	31418	73
trnT-GGU	gene	translation-rna	+	31974	32046	72
psbD	gene	photosystem-ii	+	33425	34487	1062
psbC	gene	photosystem-ii	+	34434	35856	1422
trnS-UGA	gene	translation-rna	−	36097	36190	93
psbZ	gene	photosystem-ii	+	36519	36708	189
trnG-GCC	gene	translation-rna	+	36983	37054	71
trnM-CAU	gene	translation-rna	−	37205	37279	74
rps14	gene	ribosomal-protein	−	37428	37731	303
psaB	gene	photosystem-i	−	37855	40060	2205
psaA	gene	photosystem-i	−	40085	42338	2253
ycf3	gene	other	−	43052	45008	1956
trnS-GGA	gene	translation-rna	+	45844	45931	87
rps4	gene	ribosomal-protein	−	46211	46817	606
trnT-UGU	gene	translation-rna	−	47186	47259	73
trnL-UAA	gene	translation-rna	+	47931	48504	573
trnF-GAA	gene	translation-rna	+	48845	48918	73
ndhJ	gene	nad-dehydrogenase	−	49568	50045	477
ndhK	gene	nad-dehydrogenase	−	50145	50823	678
ndhC	gene	nad-dehydrogenase	−	50876	51239	363
trnM-CAU	gene	translation-rna	+	53261	53334	73
atpE	gene	atp-synthase	−	53541	53943	402
atpB	gene	atp-synthase	−	53939	55436	1497
rbcL	gene	other	+	56221	57661	1440
accD	gene	other	+	58353	59847	1494
psaI	gene	photosystem-i	+	60548	60659	111
ycf4	gene	other	+	61097	61652	555
cemA	gene	other	+	62299	62989	690
petA	gene	cytochrome	+	63178	64141	963
psbJ	gene	photosystem-ii	−	65077	65200	123
psbL	gene	photosystem-ii	−	65333	65450	117
psbF	gene	photosystem-ii	−	65473	65593	120
psbE	gene	photosystem-ii	−	65607	65859	252
petL	gene	cytochrome	+	66788	66884	96
petG	gene	cytochrome	+	67058	67172	114
trnW-CCA	gene	translation-rna	−	67294	67368	74
trnP-UGG	gene	translation-rna	−	67530	67604	74
psaJ	gene	photosystem-i	+	67995	68130	135
rpl33	gene	ribosomal-protein	+	68609	68810	201
rps18	gene	ribosomal-protein	+	68980	69286	306
rpl20	gene	ribosomal-protein	−	69521	69908	387
rps12	gene	ribosomal-protein	−	70728	99005	28277
rps12	gene	ribosomal-protein	+	70728	140847	70119
clpP	gene	other	−	70975	72924	1949
psbB	gene	photosystem-ii	+	73385	74912	1527
psbT	gene	photosystem-ii	+	75104	75212	108
psbN	gene	photosystem-ii	−	75272	75404	132
psbH	gene	photosystem-ii	+	75509	75731	222
petB	gene	cytochrome	+	75855	77232	1377
petD	gene	cytochrome	+	77420	78637	1217
rpoA	gene	rna-polymerase	−	78813	79827	1014
rps11	gene	ribosomal-protein	−	79898	80315	417
rpl36	gene	ribosomal-protein	−	80416	80530	114
infA	gene	other	−	80625	80859	234
rps8	gene	ribosomal-protein	−	80983	81388	405
rpl14	gene	ribosomal-protein	−	81560	81929	369
rpl16	gene	ribosomal-protein	−	82055	83350	1295
rps3	gene	ribosomal-protein	−	83492	84155	663
rpl22	gene	ribosomal-protein	−	84164	84602	438
rps19	gene	ribosomal-protein	−	84661	84940	279
rpl2	gene	ribosomal-protein	−	84996	86488	1492
rpl23	gene	ribosomal-protein	−	86506	86788	282
trnM-CAU	gene	translation-rna	−	86953	87027	74
ycf2	gene	other	+	87125	93986	6861
ycf15	gene	other	+	94118	94316	198
trnL-CAA	gene	translation-rna	−	94576	94657	81
ndhB	gene	nad-dehydrogenase	−	95204	97416	2212
rps7	gene	ribosomal-protein	−	97690	98158	468
trnV-GAC	gene	translation-rna	+	100611	100683	72
rrn16S	gene	ribosomal-rna	+	100928	102419	1491
trnI	gene	translation-rna	+	102717	103738	1021
trnA-UGC	gene	translation-rna	+	103802	104689	887
rrn23S	gene	ribosomal-rna	+	104857	107668	2811
rrn4.5S	gene	ribosomal-rna	+	107765	107868	103
rrn5S	gene	ribosomal-rna	+	108123	108244	121
trnR-ACG	gene	translation-rna	+	108487	108561	74
trnN-GUU	gene	translation-rna	−	109131	109203	72
ycf1	gene	other	+	109532	115124	5592
rps15	gene	ribosomal-protein	+	115505	115778	273
ndhH	gene	nad-dehydrogenase	+	115874	117056	1182
ndhA	gene	nad-dehydrogenase	+	117057	119242	2185
ndhI	gene	nad-dehydrogenase	+	119317	119824	507
ndhG	gene	nad-dehydrogenase	+	120172	120703	531
ndhE	gene	nad-dehydrogenase	+	120916	121222	306
psaC	gene	photosystem-i	+	121472	121718	246
ndhD	gene	nad-dehydrogenase	+	121845	123342	1497
ccsA	gene	other	−	123608	124580	972
trnL-UAG	gene	translation-rna	−	124663	124743	80
rpl32	gene	ribosomal-protein	−	125524	125689	165
ndhF	gene	nad-dehydrogenase	+	126207	128451	2244
trnN-GUU	gene	translation-rna	+	129855	129927	72
trnR-ACG	gene	translation-rna	−	130497	130571	74
rrn5S	gene	ribosomal-rna	−	130814	130935	121
rrn4.5S	gene	ribosomal-rna	−	131190	131293	103
rrn23S	gene	ribosomal-rna	−	131390	134201	2811
trnA-UGC	gene	translation-rna	−	134369	135256	887
trnI	gene	translation-rna	−	135320	136341	1021
rrn16S	gene	ribosomal-rna	−	136639	138130	1491
trnV-GAC	gene	translation-rna	−	138375	138447	72
rps7	gene	ribosomal-protein	+	140900	141368	468
ndhB	gene	nad-dehydrogenase	+	141642	143854	2212
trnL-CAA	gene	translation-rna	+	144401	144482	81
ycf15	gene	other	−	144742	144940	198
ycf2	gene	other	−	145072	151933	6861
trnM-CAU	gene	translation-rna	+	152031	152105	74
rpl23	gene	ribosomal-protein	+	152270	152552	282
rpl2	gene	ribosomal-protein	+	152570	154062	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePV929844.1DNA · accDPV929844DNA · atpBPV929844DNA · matKPV929844DNA · ndhFPV929844DNA · psbAPV929844DNA · rbcLPV929844DNA · rps12PV929844DNA · ycf1PV929844