Coordinate-aware organelle record

Callicarpa siongsaiensis chloroplast genome

Available NC_059786.1 154,144 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	433	1492	1059
trnK-UUU	gene	translation-rna	−	1744	4317	2573
matK	gene	other	−	2051	3575	1524
rps16	gene	ribosomal-protein	−	5127	6261	1134
trnQ-UUG	gene	translation-rna	−	7417	7489	72
psbK	gene	photosystem-ii	+	7822	8008	186
psbI	gene	photosystem-ii	+	8398	8509	111
trnS-GCU	gene	translation-rna	−	8627	8715	88
trnS-CGA	gene	translation-rna	+	9421	10183	762
trnR-UCU	gene	translation-rna	+	10359	10431	72
atpA	gene	atp-synthase	−	10535	12059	1524
atpF	gene	atp-synthase	−	12126	13373	1247
atpH	gene	atp-synthase	−	13741	13987	246
atpI	gene	atp-synthase	−	15002	15746	744
rps2	gene	ribosomal-protein	−	15976	16687	711
rpoC2	gene	rna-polymerase	−	16903	21085	4182
rpoC1	gene	rna-polymerase	−	21239	24070	2831
rpoB	gene	rna-polymerase	−	24096	27309	3213
trnC-GCA	gene	translation-rna	+	28484	28555	71
petN	gene	cytochrome	+	29386	29476	90
psbM	gene	photosystem-ii	−	30398	30503	105
trnD-GUC	gene	translation-rna	−	31039	31113	74
trnY-GUA	gene	translation-rna	−	31221	31305	84
trnE-UUC	gene	translation-rna	−	31364	31437	73
trnT-GGU	gene	translation-rna	+	31993	32065	72
psbD	gene	photosystem-ii	+	33444	34506	1062
psbC	gene	photosystem-ii	+	34453	35875	1422
trnS-UGA	gene	translation-rna	−	36116	36209	93
psbZ	gene	photosystem-ii	+	36538	36727	189
trnG-GCC	gene	translation-rna	+	37002	37073	71
trnM-CAU	gene	translation-rna	−	37224	37298	74
rps14	gene	ribosomal-protein	−	37447	37750	303
psaB	gene	photosystem-i	−	37872	40077	2205
psaA	gene	photosystem-i	−	40102	42355	2253
ycf3	gene	other	−	43069	45024	1955
trnS-GGA	gene	translation-rna	+	45857	45944	87
rps4	gene	ribosomal-protein	−	46224	46830	606
trnT-UGU	gene	translation-rna	−	47197	47270	73
trnL-UAA	gene	translation-rna	+	47942	48515	573
trnF-GAA	gene	translation-rna	+	48856	48929	73
ndhJ	gene	nad-dehydrogenase	−	49577	50054	477
ndhK	gene	nad-dehydrogenase	−	50154	50832	678
ndhC	gene	nad-dehydrogenase	−	50885	51248	363
trnM-CAU	gene	translation-rna	+	53271	53344	73
atpE	gene	atp-synthase	−	53551	53953	402
atpB	gene	atp-synthase	−	53949	55446	1497
rbcL	gene	other	+	56231	57671	1440
accD	gene	other	+	58356	59850	1494
psaI	gene	photosystem-i	+	60551	60662	111
ycf4	gene	other	+	61100	61655	555
cemA	gene	other	+	62302	62992	690
petA	gene	cytochrome	+	63181	64144	963
psbJ	gene	photosystem-ii	−	65079	65202	123
psbL	gene	photosystem-ii	−	65335	65452	117
psbF	gene	photosystem-ii	−	65475	65595	120
psbE	gene	photosystem-ii	−	65609	65861	252
petL	gene	cytochrome	+	66791	66887	96
petG	gene	cytochrome	+	67061	67175	114
trnW-CCA	gene	translation-rna	−	67297	67371	74
trnP-UGG	gene	translation-rna	−	67533	67607	74
psaJ	gene	photosystem-i	+	67998	68133	135
rpl33	gene	ribosomal-protein	+	68612	68813	201
rps18	gene	ribosomal-protein	+	68983	69289	306
rpl20	gene	ribosomal-protein	−	69524	69911	387
rps12	gene	ribosomal-protein	−	70732	99007	28275
rps12	gene	ribosomal-protein	+	70732	140834	70102
clpP	gene	other	−	70979	72928	1949
psbB	gene	photosystem-ii	+	73389	74916	1527
psbT	gene	photosystem-ii	+	75108	75216	108
psbN	gene	photosystem-ii	−	75276	75408	132
psbH	gene	photosystem-ii	+	75513	75735	222
petB	gene	cytochrome	+	75859	77236	1377
petD	gene	cytochrome	+	77424	78641	1217
rpoA	gene	rna-polymerase	−	78817	79831	1014
rps11	gene	ribosomal-protein	−	79902	80319	417
rpl36	gene	ribosomal-protein	−	80420	80534	114
infA	gene	other	−	80629	80863	234
rps8	gene	ribosomal-protein	−	80987	81392	405
rpl14	gene	ribosomal-protein	−	81563	81932	369
rpl16	gene	ribosomal-protein	−	82058	83353	1295
rps3	gene	ribosomal-protein	−	83495	84158	663
rpl22	gene	ribosomal-protein	−	84167	84605	438
rps19	gene	ribosomal-protein	−	84664	84943	279
rpl2	gene	ribosomal-protein	−	84998	86490	1492
rpl23	gene	ribosomal-protein	−	86508	86790	282
trnM-CAU	gene	translation-rna	−	86955	87029	74
ycf2	gene	other	+	87127	93988	6861
ycf15	gene	other	+	94120	94318	198
trnL-CAA	gene	translation-rna	−	94578	94659	81
ndhB	gene	nad-dehydrogenase	−	95206	97418	2212
rps7	gene	ribosomal-protein	−	97692	98160	468
trnV-GAC	gene	translation-rna	+	100613	100685	72
rrn16S	gene	ribosomal-rna	+	100930	102421	1491
trnI	gene	translation-rna	+	102719	103740	1021
trnA-UGC	gene	translation-rna	+	103804	104692	888
rrn23S	gene	ribosomal-rna	+	104860	107671	2811
rrn4.5S	gene	ribosomal-rna	+	107768	107871	103
rrn5S	gene	ribosomal-rna	+	108126	108247	121
trnR-ACG	gene	translation-rna	+	108490	108564	74
trnN-GUU	gene	translation-rna	−	109133	109205	72
ndhF	gene	nad-dehydrogenase	−	110609	112853	2244
rpl32	gene	ribosomal-protein	+	113371	113548	177
trnL-UAG	gene	translation-rna	+	114329	114409	80
ccsA	gene	other	+	114493	115465	972
ndhD	gene	nad-dehydrogenase	−	115608	117261	1653
psaC	gene	photosystem-i	−	117354	117600	246
ndhE	gene	nad-dehydrogenase	−	117850	118156	306
ndhG	gene	nad-dehydrogenase	−	118369	118900	531
ndhI	gene	nad-dehydrogenase	−	119248	119755	507
ndhA	gene	nad-dehydrogenase	−	119830	122015	2185
ndhH	gene	nad-dehydrogenase	−	122016	123198	1182
rps15	gene	ribosomal-protein	−	123294	123567	273
ycf1	gene	other	−	123948	129513	5565
trnN-GUU	gene	translation-rna	+	129842	129914	72
trnR-ACG	gene	translation-rna	−	130483	130557	74
rrn5S	gene	ribosomal-rna	−	130800	130921	121
rrn4.5S	gene	ribosomal-rna	−	131176	131279	103
rrn23S	gene	ribosomal-rna	−	131376	134187	2811
trnA-UGC	gene	translation-rna	−	134355	135243	888
trnI	gene	translation-rna	−	135307	136328	1021
rrn16S	gene	ribosomal-rna	−	136626	138117	1491
trnV-GAC	gene	translation-rna	−	138362	138434	72
rps7	gene	ribosomal-protein	+	140887	141355	468
ndhB	gene	nad-dehydrogenase	+	141629	143841	2212
trnL-CAA	gene	translation-rna	+	144388	144469	81
ycf15	gene	other	−	144729	144927	198
ycf2	gene	other	−	145059	151920	6861
trnM-CAU	gene	translation-rna	+	152018	152092	74
rpl23	gene	ribosomal-protein	+	152257	152539	282
rpl2	gene	ribosomal-protein	+	152557	154049	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_059786.1DNA · accDNC_059786DNA · atpBNC_059786DNA · matKNC_059786DNA · ndhFNC_059786DNA · psbANC_059786DNA · rbcLNC_059786DNA · rps12NC_059786DNA · ycf1NC_059786