Coordinate-aware organelle record

Clerodendranthus spicatus chloroplast genome

Available NC_056393.1 152,151 bp 129 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

129 features

Gene	Type	Group	Strand	Start	End	Length
rpoB	gene	rna-polymerase	+	753	3966	3213
rpoC1	gene	rna-polymerase	+	3992	6799	2807
rpoC2	gene	rna-polymerase	+	6975	11133	4158
rps2	gene	ribosomal-protein	+	11341	12052	711
atpI	gene	atp-synthase	+	12278	13022	744
atpH	gene	atp-synthase	+	14055	14301	246
atpF	gene	atp-synthase	+	14574	15815	1241
atpA	gene	atp-synthase	+	15916	17440	1524
trnR-UCU	gene	translation-rna	+	17544	17616	72
trnT-CGU	gene	translation-rna	+	17806	18570	764
trnS-GCU	gene	translation-rna	−	19308	19396	88
psbI	gene	photosystem-ii	−	19549	19660	111
psbK	gene	photosystem-ii	−	20046	20232	186
trnQ-UUG	gene	translation-rna	−	20617	20689	72
rps16	gene	ribosomal-protein	+	21629	22763	1134
trnK-UUU	gene	translation-rna	−	23289	25868	2579
matK	gene	other	+	24028	25549	1521
psbA	gene	photosystem-ii	+	26096	27155	1059
trnH-GUG	gene	translation-rna	−	27454	27528	74
rpl2	gene	ribosomal-protein	−	27643	29122	1479
rpl23	gene	ribosomal-protein	−	29140	29422	282
trnI-CAU	gene	translation-rna	−	29587	29661	74
ycf2	gene	other	+	29755	36583	6828
trnL-CAA	gene	translation-rna	−	37182	37263	81
ndhB	gene	nad-dehydrogenase	−	37832	40040	2208
rps7	gene	ribosomal-protein	−	40295	40763	468
rps12	gene	ribosomal-protein	−	40816	110688	69872
trnV-GAC	gene	translation-rna	+	43267	43339	72
rrn16S	gene	ribosomal-rna	+	43559	45050	1491
trnI-GAU	gene	translation-rna	+	45347	46365	1018
trnA-UGC	gene	translation-rna	+	46429	47307	878
rrn23S	gene	ribosomal-rna	+	47471	50282	2811
rrn4.5S	gene	ribosomal-rna	−	50380	50645	265
rrn5S	gene	ribosomal-rna	+	50738	50869	131
trnR-ACG	gene	translation-rna	+	51102	51176	74
trnN-GUU	gene	translation-rna	−	51749	51821	72
ycf1	gene	other	+	52162	53293	1131
ndhF	gene	nad-dehydrogenase	−	53186	55418	2232
trnL-UAG	gene	translation-rna	+	56827	56907	80
ccsA	gene	other	+	57023	57995	972
ndhD	gene	nad-dehydrogenase	−	58207	59701	1494
psaC	gene	photosystem-i	−	59827	60073	246
ndhE	gene	nad-dehydrogenase	−	60327	60633	306
ndhG	gene	nad-dehydrogenase	−	60841	61372	531
ndhI	gene	nad-dehydrogenase	−	61734	62241	507
ndhA	gene	nad-dehydrogenase	−	62321	64424	2103
ndhH	gene	nad-dehydrogenase	−	64425	65607	1182
rps15	gene	ribosomal-protein	−	65721	65994	273
ycf1	gene	other	−	66420	69831	3411
trnN-GUU	gene	translation-rna	+	72314	72386	72
trnR-ACG	gene	translation-rna	−	72959	73033	74
rrn5S	gene	ribosomal-rna	−	73266	73397	131
rrn4.5S	gene	ribosomal-rna	+	73490	73755	265
rrn23S	gene	ribosomal-rna	−	73853	76664	2811
trnA-UGC	gene	translation-rna	−	76828	77706	878
trnI-GAU	gene	translation-rna	−	77770	78788	1018
rrn16S	gene	ribosomal-rna	−	79085	80576	1491
trnV-GAC	gene	translation-rna	−	80796	80868	72
rps12	gene	ribosomal-protein	+	82527	110688	28161
rps7	gene	ribosomal-protein	+	83372	83840	468
ndhB	gene	nad-dehydrogenase	+	84095	86303	2208
trnL-CAA	gene	translation-rna	+	86872	86953	81
ycf2	gene	other	−	87552	94380	6828
trnI-CAU	gene	translation-rna	+	94474	94548	74
rpl23	gene	ribosomal-protein	+	94713	94995	282
rpl2	gene	ribosomal-protein	+	95013	96492	1479
rps19	gene	ribosomal-protein	+	96559	96838	279
rpl22	gene	ribosomal-protein	+	96919	97393	474
rps3	gene	ribosomal-protein	+	97377	98034	657
rpl16	gene	ribosomal-protein	+	98183	99412	1229
rpl14	gene	ribosomal-protein	+	99544	99913	369
rps8	gene	ribosomal-protein	+	100084	100489	405
infA	gene	other	+	100615	100849	234
rpl36	gene	ribosomal-protein	+	100944	101058	114
rps11	gene	ribosomal-protein	+	101167	101584	417
rpoA	gene	rna-polymerase	+	101662	102670	1008
petD	gene	cytochrome	−	102846	103371	525
petB	gene	cytochrome	−	104218	105583	1365
psbH	gene	photosystem-ii	−	105725	105944	219
psbN	gene	photosystem-ii	+	106049	106181	132
psbT	gene	photosystem-ii	−	106246	106348	102
psbB	gene	photosystem-ii	−	106540	108067	1527
clpP	gene	other	+	108524	110456	1932
rpl20	gene	ribosomal-protein	+	111414	111801	387
rps18	gene	ribosomal-protein	−	112024	112333	309
rpl33	gene	ribosomal-protein	−	112496	112706	210
psaJ	gene	photosystem-i	−	113145	113280	135
trnP-UGG	gene	translation-rna	−	113573	113647	74
trnW-CCA	gene	translation-rna	−	113815	113889	74
petG	gene	cytochrome	−	114001	114121	120
petL	gene	cytochrome	−	114219	114330	111
psbE	gene	photosystem-ii	+	115074	115326	252
psbF	gene	photosystem-ii	+	115316	115460	144
psbL	gene	photosystem-ii	+	115483	115600	117
psbJ	gene	photosystem-ii	+	115715	115868	153
petA	gene	cytochrome	−	116876	117839	963
cemA	gene	other	−	118053	118758	705
ycf4	gene	other	−	119395	119950	555
psaI	gene	photosystem-i	−	120393	120522	129
accD	gene	other	−	121232	122795	1563
rbcL	gene	other	−	123406	124861	1455
atpB	gene	atp-synthase	+	125660	127151	1491
atpE	gene	atp-synthase	+	127168	127549	381
trnM-CAU	gene	translation-rna	+	127799	127872	73
ndhC	gene	nad-dehydrogenase	+	129546	129885	339
ndhK	gene	nad-dehydrogenase	+	129944	130613	669
ndhJ	gene	nad-dehydrogenase	+	130723	131200	477
trnF-GAA	gene	translation-rna	+	131914	131987	73
trnL-UAA	gene	translation-rna	+	132269	132826	557
trnT-UGU	gene	translation-rna	−	133514	133587	73
rps4	gene	ribosomal-protein	+	133952	134558	606
trnS-GGA	gene	translation-rna	+	134874	134961	87
ycf3	gene	other	+	135801	137720	1919
psaA	gene	photosystem-i	+	138501	140748	2247
psaB	gene	photosystem-i	+	140773	142978	2205
rps14	gene	ribosomal-protein	+	143100	143403	303
trnM-CAU	gene	translation-rna	−	143571	143645	74
trnG-GCC	gene	translation-rna	+	143817	143888	71
psbZ	gene	photosystem-ii	−	144100	144289	189
trnS-UGA	gene	translation-rna	−	144654	144747	93
psbC	gene	photosystem-ii	−	144947	146369	1422
psbD	gene	photosystem-ii	−	146316	147378	1062
trnT-GGU	gene	translation-rna	+	148686	148758	72
trnE-UUC	gene	translation-rna	−	149359	149432	73
trnY-GUA	gene	translation-rna	−	149515	149599	84
trnD-GUC	gene	translation-rna	−	149716	149790	74
psbM	gene	photosystem-ii	+	150280	150385	105
petN	gene	cytochrome	−	151394	151484	90
trnC-GCA	gene	translation-rna	+	151679	151750	71

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_056393.1DNA · accDNC_056393DNA · atpBNC_056393DNA · matKNC_056393DNA · ndhFNC_056393DNA · psbANC_056393DNA · rbcLNC_056393DNA · rps12NC_056393DNA · ycf1NC_056393