Coordinate-aware organelle record

Clerodendrum thomsoniae chloroplast genome

Available NC_064126.1 151,053 bp 130 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	439	1498	1059
trnK-UUU	gene	translation-rna	−	1712	4285	2573
matK	gene	other	−	2006	3542	1536
rps16	gene	ribosomal-protein	−	4909	6067	1158
trnQ-UUG	gene	translation-rna	−	6997	7069	72
psbK	gene	photosystem-ii	+	7424	7610	186
psbI	gene	photosystem-ii	+	8015	8126	111
trnS-GCU	gene	translation-rna	−	8250	8338	88
trnS-CGA	gene	translation-rna	+	8970	9738	768
trnR-UCU	gene	translation-rna	+	9916	9988	72
atpA	gene	atp-synthase	−	10092	11616	1524
atpF	gene	atp-synthase	−	11703	12945	1242
atpH	gene	atp-synthase	−	13315	13561	246
atpI	gene	atp-synthase	−	14576	15320	744
rps2	gene	ribosomal-protein	−	15498	16209	711
rpoC2	gene	rna-polymerase	−	16397	20576	4179
rpoC1	gene	rna-polymerase	−	20730	23546	2816
rpoB	gene	rna-polymerase	−	23572	26785	3213
trnC-GCA	gene	translation-rna	+	27991	28062	71
petN	gene	cytochrome	+	28621	28711	90
psbM	gene	photosystem-ii	−	29652	29757	105
trnD-GUC	gene	translation-rna	−	30259	30333	74
trnY-GUA	gene	translation-rna	−	30450	30534	84
trnE-UUC	gene	translation-rna	−	30593	30666	73
trnT-GGU	gene	translation-rna	+	31214	31286	72
psbD	gene	photosystem-ii	+	32442	33504	1062
psbC	gene	photosystem-ii	+	33451	34873	1422
trnS-UGA	gene	translation-rna	−	35135	35228	93
psbZ	gene	photosystem-ii	+	35532	35721	189
trnG-GCC	gene	translation-rna	+	35937	36008	71
trnM-CAU	gene	translation-rna	−	36183	36257	74
rps14	gene	ribosomal-protein	−	36401	36704	303
psaB	gene	photosystem-i	−	36826	39031	2205
psaA	gene	photosystem-i	−	39056	41309	2253
ycf3	gene	other	−	42003	43943	1940
trnS-GGA	gene	translation-rna	+	44364	44451	87
rps4	gene	ribosomal-protein	−	44751	45357	606
trnT-UGU	gene	translation-rna	−	45728	45801	73
trnL-UAA	gene	translation-rna	+	46482	47053	571
trnF-GAA	gene	translation-rna	+	47342	47415	73
ndhJ	gene	nad-dehydrogenase	−	48031	48508	477
ndhK	gene	nad-dehydrogenase	−	48608	49286	678
ndhC	gene	nad-dehydrogenase	−	49339	49702	363
trnV-UAC	gene	translation-rna	−	50620	51283	663
trnM-CAU	gene	translation-rna	+	51463	51536	73
atpE	gene	atp-synthase	−	51767	52169	402
atpB	gene	atp-synthase	−	52165	53662	1497
rbcL	gene	other	+	54450	55890	1440
accD	gene	other	+	56547	58071	1524
psaI	gene	photosystem-i	+	58685	58796	111
ycf4	gene	other	+	59219	59774	555
cemA	gene	other	+	60406	61096	690
petA	gene	cytochrome	+	61304	62267	963
psbJ	gene	photosystem-ii	−	63162	63285	123
psbL	gene	photosystem-ii	−	63418	63535	117
psbF	gene	photosystem-ii	−	63558	63678	120
psbE	gene	photosystem-ii	−	63692	63944	252
petL	gene	cytochrome	+	64857	64953	96
petG	gene	cytochrome	+	65131	65245	114
trnW-CCA	gene	translation-rna	−	65367	65441	74
trnP-UGG	gene	translation-rna	−	65608	65682	74
psaJ	gene	photosystem-i	+	65967	66102	135
rpl33	gene	ribosomal-protein	+	66581	66782	201
rps18	gene	ribosomal-protein	+	66948	67254	306
rpl20	gene	ribosomal-protein	−	67489	67876	387
rps12	gene	ribosomal-protein	−	68691	96834	28143
rps12	gene	ribosomal-protein	+	68691	137204	68513
clpP	gene	other	−	68932	70888	1956
psbB	gene	photosystem-ii	+	71292	72819	1527
psbT	gene	photosystem-ii	+	72996	73104	108
psbN	gene	photosystem-ii	−	73164	73296	132
psbH	gene	photosystem-ii	+	73401	73623	222
petB	gene	cytochrome	+	73744	75108	1364
petD	gene	cytochrome	+	75977	76502	525
rpoA	gene	rna-polymerase	−	76691	77705	1014
rps11	gene	ribosomal-protein	−	77781	78198	417
rpl36	gene	ribosomal-protein	−	78299	78413	114
infA	gene	other	−	78508	78742	234
rps8	gene	ribosomal-protein	−	78865	79270	405
rpl14	gene	ribosomal-protein	−	79445	79814	369
rpl16	gene	ribosomal-protein	−	79930	80341	411
rps3	gene	ribosomal-protein	−	81340	81997	657
rpl22	gene	ribosomal-protein	−	81981	82449	468
rpl2	gene	ribosomal-protein	−	82836	84328	1492
rpl23	gene	ribosomal-protein	−	84346	84628	282
trnM-CAU	gene	translation-rna	−	84793	84867	74
ycf2	gene	other	+	84955	91795	6840
ycf15	gene	other	+	91936	92134	198
trnL-CAA	gene	translation-rna	−	92401	92482	81
ndhB	gene	nad-dehydrogenase	−	93031	95243	2212
rps7	gene	ribosomal-protein	−	95516	95984	468
trnV-GAC	gene	translation-rna	+	98292	98364	72
rrn16S	gene	ribosomal-rna	+	98591	100081	1490
trnI	gene	translation-rna	+	100379	101399	1020
trnA-UGC	gene	translation-rna	+	101463	102343	880
rrn23S	gene	ribosomal-rna	+	102510	105419	2909
rrn4.5S	gene	ribosomal-rna	−	105418	105683	265
rrn5S	gene	ribosomal-rna	+	105781	105912	131
trnR-ACG	gene	translation-rna	+	106143	106217	74
trnN-GUU	gene	translation-rna	−	106780	106852	72
ycf1	gene	other	+	107193	112770	5577
rps15	gene	ribosomal-protein	+	113136	113409	273
ndhH	gene	nad-dehydrogenase	+	113505	114687	1182
ndhA	gene	nad-dehydrogenase	+	114688	116697	2009
ndhI	gene	nad-dehydrogenase	+	116787	117294	507
ndhG	gene	nad-dehydrogenase	+	117635	118166	531
ndhE	gene	nad-dehydrogenase	+	118376	118682	306
psaC	gene	photosystem-i	+	118932	119178	246
ndhD	gene	nad-dehydrogenase	+	119306	120806	1500
ccsA	gene	other	−	121012	121978	966
trnL-UAG	gene	translation-rna	−	122062	122142	80
ndhF	gene	nad-dehydrogenase	+	123278	125510	2232
trnN-GUU	gene	translation-rna	+	126943	127015	72
trnR-ACG	gene	translation-rna	−	127578	127652	74
rrn5S	gene	ribosomal-rna	−	127883	128014	131
rrn4.5S	gene	ribosomal-rna	+	128112	128377	265
rrn23S	gene	ribosomal-rna	−	128376	131285	2909
trnA-UGC	gene	translation-rna	−	131452	132332	880
trnI	gene	translation-rna	−	132396	133416	1020
rrn16S	gene	ribosomal-rna	−	133714	135204	1490
trnV-GAC	gene	translation-rna	−	135431	135503	72
rps7	gene	ribosomal-protein	+	137811	138279	468
ndhB	gene	nad-dehydrogenase	+	138552	140764	2212
trnL-CAA	gene	translation-rna	+	141313	141394	81
ycf15	gene	other	−	141661	141859	198
ycf2	gene	other	−	142000	148840	6840
trnM-CAU	gene	translation-rna	+	148928	149002	74
rpl23	gene	ribosomal-protein	+	149167	149449	282
rpl2	gene	ribosomal-protein	+	149467	150959	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_064126.1DNA · accDNC_064126DNA · atpBNC_064126DNA · matKNC_064126DNA · ndhFNC_064126DNA · psbANC_064126DNA · rbcLNC_064126DNA · rps12NC_064126DNA · ycf1NC_064126