Elsholtzia splendens chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
psbA · NC_063558.1 · 290–1,348 bp · −
trnK-UUU · NC_063558.1 · 1,577–4,161 bp · −
matK · NC_063558.1 · 1,885–3,426 bp · −
rps16 · NC_063558.1 · 4,690–5,837 bp · −
trnQ-UUG · NC_063558.1 · 6,654–6,725 bp · −
trnS-GCU · NC_063558.1 · 7,921–8,008 bp · −
atpA · NC_063558.1 · 9,800–11,323 bp · −
atpF · NC_063558.1 · 11,423–12,674 bp · −
atpH · NC_063558.1 · 12,943–13,188 bp · −
atpI · NC_063558.1 · 13,812–14,555 bp · −
rps2 · NC_063558.1 · 14,788–15,498 bp · −
rpoC2 · NC_063558.1 · 15,730–19,914 bp · −
rpoC1 · NC_063558.1 · 20,080–22,919 bp · −
rpoB · NC_063558.1 · 22,946–26,158 bp · −
psbM · NC_063558.1 · 28,632–28,736 bp · −
trnD-GUC · NC_063558.1 · 29,261–29,334 bp · −
trnY-GUA · NC_063558.1 · 29,445–29,528 bp · −
trnS-UGA · NC_063558.1 · 33,932–34,013 bp · −
trnfM-CAU · NC_063558.1 · 35,068–35,141 bp · −
rps14 · NC_063558.1 · 35,288–35,590 bp · −
psaB · NC_063558.1 · 35,713–37,917 bp · −
psaA · NC_063558.1 · 37,943–40,195 bp · −
ycf3 · NC_063558.1 · 40,843–42,813 bp · −
rps4 · NC_063558.1 · 44,032–44,637 bp · −
trnT-UGU · NC_063558.1 · 45,030–45,102 bp · −
ndhJ · NC_063558.1 · 47,420–47,896 bp · −
ndhK · NC_063558.1 · 48,008–48,685 bp · −
ndhC · NC_063558.1 · 48,737–49,099 bp · −
trnV-UAC · NC_063558.1 · 50,034–50,684 bp · −
atpE · NC_063558.1 · 51,156–51,557 bp · −
atpB · NC_063558.1 · 51,554–53,050 bp · −
psbJ · NC_063558.1 · 62,854–62,976 bp · −
psbL · NC_063558.1 · 63,111–63,227 bp · −
psbF · NC_063558.1 · 63,251–63,370 bp · −
psbE · NC_063558.1 · 63,385–63,636 bp · −
trnW-CCA · NC_063558.1 · 65,051–65,124 bp · −
trnP-UGG · NC_063558.1 · 65,284–65,357 bp · −
rpl20 · NC_063558.1 · 67,146–67,532 bp · −
rps12 · NC_063558.1 · 68,328–68,453 bp · −
rps12 · NC_063558.1 · 95,729–96,519 bp · −
clpP · NC_063558.1 · 68,569–70,517 bp · −
psbN · NC_063558.1 · 72,854–72,985 bp · −
rpoA · NC_063558.1 · 76,375–77,382 bp · −
rps11 · NC_063558.1 · 77,454–77,861 bp · −
rpl36 · NC_063558.1 · 77,974–78,087 bp · −
infA · NC_063558.1 · 78,190–78,423 bp · −
rps8 · NC_063558.1 · 78,549–78,953 bp · −
rpl14 · NC_063558.1 · 79,122–79,490 bp · −
rpl16 · NC_063558.1 · 79,619–80,913 bp · −
rps3 · NC_063558.1 · 81,060–81,722 bp · −
rpl22 · NC_063558.1 · 81,707–82,174 bp · −
rps19 · NC_063558.1 · 82,240–82,518 bp · −
rpl2 · NC_063558.1 · 82,582–84,070 bp · −
rpl23 · NC_063558.1 · 84,089–84,370 bp · −
trnI-CAU · NC_063558.1 · 84,536–84,609 bp · −
trnL-CAA · NC_063558.1 · 92,091–92,171 bp · −
ndhB · NC_063558.1 · 92,736–94,943 bp · −
rps7 · NC_063558.1 · 95,208–95,675 bp · −
trnN-GUU · NC_063558.1 · 106,589–106,660 bp · −
ndhF · NC_063558.1 · 108,013–110,244 bp · −
ndhD · NC_063558.1 · 112,915–114,444 bp · −
psaC · NC_063558.1 · 114,539–114,784 bp · −
ndhE · NC_063558.1 · 115,038–115,343 bp · −
ndhG · NC_063558.1 · 115,564–116,094 bp · −
ndhI · NC_063558.1 · 116,446–116,952 bp · −
ndhA · NC_063558.1 · 117,033–119,147 bp · −
ndhH · NC_063558.1 · 119,149–120,384 bp · −
rps15 · NC_063558.1 · 120,425–120,697 bp · −
ycf1 · NC_063558.1 · 121,102–126,705 bp · −
trnR-ACG · NC_063558.1 · 127,548–127,621 bp · −
rrn5S · NC_063558.1 · 127,860–127,980 bp · −
rrn4.5S · NC_063558.1 · 128,236–128,338 bp · −
rrn23S · NC_063558.1 · 128,437–131,247 bp · −
trnA-UGC · NC_063558.1 · 131,415–132,298 bp · −
trnI-GAU · NC_063558.1 · 132,363–133,381 bp · −
rrn16S · NC_063558.1 · 133,680–135,170 bp · −
trnV-GAC · NC_063558.1 · 135,397–135,468 bp · −
ycf2 · NC_063558.1 · 142,088–146,479 bp · −
trnH-GUG · NC_063558.1 · 151,118–151,191 bp · −
psbK · NC_063558.1 · 7,092–7,277 bp · +
psbI · NC_063558.1 · 7,667–7,777 bp · +
trnG-UCC · NC_063558.1 · 8,672–9,420 bp · +
trnR-UCU · NC_063558.1 · 9,609–9,680 bp · +
trnC-GCA · NC_063558.1 · 27,302–27,372 bp · +
petN · NC_063558.1 · 27,535–27,624 bp · +
trnT-GGU · NC_063558.1 · 30,062–30,133 bp · +
psbD · NC_063558.1 · 31,253–32,314 bp · +
psbC · NC_063558.1 · 32,262–33,683 bp · +
psbZ · NC_063558.1 · 34,360–34,548 bp · +
trnG-GCC · NC_063558.1 · 34,822–34,892 bp · +
trnS-GGA · NC_063558.1 · 43,642–43,728 bp · +
trnL-UAA · NC_063558.1 · 45,785–46,367 bp · +
trnF-GAA · NC_063558.1 · 46,664–46,736 bp · +
trnM-CAU · NC_063558.1 · 50,865–50,937 bp · +
rbcL · NC_063558.1 · 53,817–55,277 bp · +
accD · NC_063558.1 · 55,984–57,465 bp · +
psaI · NC_063558.1 · 58,165–58,275 bp · +
ycf4 · NC_063558.1 · 58,730–59,284 bp · +
cemA · NC_063558.1 · 59,968–60,657 bp · +
petA · NC_063558.1 · 60,880–61,842 bp · +
petL · NC_063558.1 · 64,539–64,634 bp · +
petG · NC_063558.1 · 64,810–64,923 bp · +
psaJ · NC_063558.1 · 65,655–65,789 bp · +
rpl33 · NC_063558.1 · 66,253–66,453 bp · +
rps18 · NC_063558.1 · 66,624–66,929 bp · +
rps12 · NC_063558.1 · 137,064–137,854 bp · +
psbB · NC_063558.1 · 70,975–72,501 bp · +
psbT · NC_063558.1 · 72,687–72,788 bp · +
psbH · NC_063558.1 · 73,089–73,310 bp · +
petB · NC_063558.1 · 73,437–74,803 bp · +
petD · NC_063558.1 · 74,992–76,186 bp · +
ycf2 · NC_063558.1 · 87,104–91,495 bp · +
trnV-GAC · NC_063558.1 · 98,115–98,186 bp · +
rrn16S · NC_063558.1 · 98,413–99,903 bp · +
trnI-GAU · NC_063558.1 · 100,202–101,220 bp · +
trnA-UGC · NC_063558.1 · 101,285–102,168 bp · +
rrn23S · NC_063558.1 · 102,336–105,146 bp · +
rrn4.5S · NC_063558.1 · 105,245–105,347 bp · +
rrn5S · NC_063558.1 · 105,603–105,723 bp · +
trnR-ACG · NC_063558.1 · 105,962–106,035 bp · +
rpl32 · NC_063558.1 · 110,650–110,823 bp · +
trnL-UAG · NC_063558.1 · 111,515–111,594 bp · +
ccsA · NC_063558.1 · 111,691–112,662 bp · +
trnN-GUU · NC_063558.1 · 126,923–126,994 bp · +
rps7 · NC_063558.1 · 137,908–138,375 bp · +
ndhB · NC_063558.1 · 138,640–140,847 bp · +
trnL-CAA · NC_063558.1 · 141,412–141,492 bp · +
trnI-CAU · NC_063558.1 · 148,974–149,047 bp · +
rpl23 · NC_063558.1 · 149,213–149,494 bp · +
rpl2 · NC_063558.1 · 149,513–151,001 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Elsholtzia splendens
ANNOTATED PLASTOME
NC_063558.1
151,224 bp · 129 genes
Gene function
Photosystem II
Transfer RNA
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37806 75612 113418 151224 bp
Forward strand 5′ → 3′
psbK psbI trnG-UCC trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 trnV-GAC rrn16S trnI-GAU trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnS-UGA trnfM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf2 trnH-GUG
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
130 local segments
Gene Type Group Strand Start End Length
psbA gene − 290 1348 1059 Locate
trnK-UUU gene − 1577 4161 2585 Locate
matK gene − 1885 3426 1542 Locate
rps16 gene − 4690 5837 1148 Locate
trnQ-UUG gene − 6654 6725 72 Locate
psbK gene + 7092 7277 186 Locate
psbI gene + 7667 7777 111 Locate
trnS-GCU gene − 7921 8008 88 Locate
trnG-UCC gene + 8672 9420 749 Locate
trnR-UCU gene + 9609 9680 72 Locate
atpA gene − 9800 11323 1524 Locate
atpF gene − 11423 12674 1252 Locate
atpH gene − 12943 13188 246 Locate
atpI gene − 13812 14555 744 Locate
rps2 gene − 14788 15498 711 Locate
rpoC2 gene − 15730 19914 4185 Locate
rpoC1 gene − 20080 22919 2840 Locate
rpoB gene − 22946 26158 3213 Locate
trnC-GCA gene + 27302 27372 71 Locate
petN gene + 27535 27624 90 Locate
psbM gene − 28632 28736 105 Locate
trnD-GUC gene − 29261 29334 74 Locate
trnY-GUA gene − 29445 29528 84 Locate
trnT-GGU gene + 30062 30133 72 Locate
psbD gene + 31253 32314 1062 Locate
psbC gene + 32262 33683 1422 Locate
trnS-UGA gene − 33932 34013 82 Locate
psbZ gene + 34360 34548 189 Locate
trnG-GCC gene + 34822 34892 71 Locate
trnfM-CAU gene − 35068 35141 74 Locate
rps14 gene − 35288 35590 303 Locate
psaB gene − 35713 37917 2205 Locate
psaA gene − 37943 40195 2253 Locate
ycf3 gene − 40843 42813 1971 Locate
trnS-GGA gene + 43642 43728 87 Locate
rps4 gene − 44032 44637 606 Locate
trnT-UGU gene − 45030 45102 73 Locate
trnL-UAA gene + 45785 46367 583 Locate
trnF-GAA gene + 46664 46736 73 Locate
ndhJ gene − 47420 47896 477 Locate
ndhK gene − 48008 48685 678 Locate
ndhC gene − 48737 49099 363 Locate
trnV-UAC gene − 50034 50684 651 Locate
trnM-CAU gene + 50865 50937 73 Locate
atpE gene − 51156 51557 402 Locate
atpB gene − 51554 53050 1497 Locate
rbcL gene + 53817 55277 1461 Locate
accD gene + 55984 57465 1482 Locate
psaI gene + 58165 58275 111 Locate
ycf4 gene + 58730 59284 555 Locate
cemA gene + 59968 60657 690 Locate
petA gene + 60880 61842 963 Locate
psbJ gene − 62854 62976 123 Locate
psbL gene − 63111 63227 117 Locate
psbF gene − 63251 63370 120 Locate
psbE gene − 63385 63636 252 Locate
petL gene + 64539 64634 96 Locate
petG gene + 64810 64923 114 Locate
trnW-CCA gene − 65051 65124 74 Locate
trnP-UGG gene − 65284 65357 74 Locate
psaJ gene + 65655 65789 135 Locate
rpl33 gene + 66253 66453 201 Locate
rps18 gene + 66624 66929 306 Locate
rpl20 gene − 67146 67532 387 Locate
rps12 gene − 68328 68453 126 Locate
clpP gene − 68569 70517 1949 Locate
psbB gene + 70975 72501 1527 Locate
psbT gene + 72687 72788 102 Locate
psbN gene − 72854 72985 132 Locate
psbH gene + 73089 73310 222 Locate
petB gene + 73437 74803 1367 Locate
petD gene + 74992 76186 1195 Locate
rpoA gene − 76375 77382 1008 Locate
rps11 gene − 77454 77861 408 Locate
rpl36 gene − 77974 78087 114 Locate
infA gene − 78190 78423 234 Locate
rps8 gene − 78549 78953 405 Locate
rpl14 gene − 79122 79490 369 Locate
rpl16 gene − 79619 80913 1295 Locate
rps3 gene − 81060 81722 663 Locate
rpl22 gene − 81707 82174 468 Locate
rps19 gene − 82240 82518 279 Locate
rpl2 gene − 82582 84070 1489 Locate
rpl23 gene − 84089 84370 282 Locate
trnI-CAU gene − 84536 84609 74 Locate
ycf2 gene + 87104 91495 4392 Locate
trnL-CAA gene − 92091 92171 81 Locate
ndhB gene − 92736 94943 2208 Locate
rps7 gene − 95208 95675 468 Locate
rps12 gene − 95729 96519 791 Locate
trnV-GAC gene + 98115 98186 72 Locate
rrn16S gene + 98413 99903 1491 Locate
trnI-GAU gene + 100202 101220 1019 Locate
trnA-UGC gene + 101285 102168 884 Locate
rrn23S gene + 102336 105146 2811 Locate
rrn4.5S gene + 105245 105347 103 Locate
rrn5S gene + 105603 105723 121 Locate
trnR-ACG gene + 105962 106035 74 Locate
trnN-GUU gene − 106589 106660 72 Locate
ndhF gene − 108013 110244 2232 Locate
rpl32 gene + 110650 110823 174 Locate
trnL-UAG gene + 111515 111594 80 Locate
ccsA gene + 111691 112662 972 Locate
ndhD gene − 112915 114444 1530 Locate
psaC gene − 114539 114784 246 Locate
ndhE gene − 115038 115343 306 Locate
ndhG gene − 115564 116094 531 Locate
ndhI gene − 116446 116952 507 Locate
ndhA gene − 117033 119147 2115 Locate
ndhH gene − 119149 120384 1236 Locate
rps15 gene − 120425 120697 273 Locate
ycf1 gene − 121102 126705 5604 Locate
trnN-GUU gene + 126923 126994 72 Locate
trnR-ACG gene − 127548 127621 74 Locate
rrn5S gene − 127860 127980 121 Locate
rrn4.5S gene − 128236 128338 103 Locate
rrn23S gene − 128437 131247 2811 Locate
trnA-UGC gene − 131415 132298 884 Locate
trnI-GAU gene − 132363 133381 1019 Locate
rrn16S gene − 133680 135170 1491 Locate
trnV-GAC gene − 135397 135468 72 Locate
rps12 gene + 137064 137854 791 Locate
rps7 gene + 137908 138375 468 Locate
ndhB gene + 138640 140847 2208 Locate
trnL-CAA gene + 141412 141492 81 Locate
ycf2 gene − 142088 146479 4392 Locate
trnI-CAU gene + 148974 149047 74 Locate
rpl23 gene + 149213 149494 282 Locate
rpl2 gene + 149513 151001 1489 Locate
trnH-GUG gene − 151118 151191 74 Locate
Status Available
Accession NC_063558.1
Length 151,224 bp
GC content 37.8%
Annotated genes 129
Gene sequence records 8
Photosystem Ii 15 Translation Rna 36 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources