Species pathway scientific record

Elsholtzia splendens

A species-level view of family assignments, traceable candidate identifiers and any linked expression context in the current pathway evidence package.

Lamiaceae rank
15
Source assignments
8,810
Public candidate records
2,561
Observed modules
88
High-confidence records
1,294
Expression matrix
Unavailable

Pathway composition

Six pathway classes

Candidate rate values are source-derived summaries; they are not pathway-completeness percentages.

Compare with other species

Terpenoid

Terpenoid biosynthesis

504 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
BAHDBAHD acyltransferase family Stable locus 58950plantsme
CYP71Cytochrome P450 CYP71 family Stable locus 5750plantsme
CYP76Cytochrome P450 CYP76 family Stable locus 36650plantsme
FPPSFarnesyl diphosphate synthase family Stable locus 1,66150plantsme
IDIIsopentenyl-diphosphate isomerase family Stable locus 8150plantsme
TPSTerpene synthase family Stable locus 10850plantsme
UGTUDP-dependent glycosyltransferase family Stable locus 83250plantsme
HDS_IspGHDS / IspG enzyme-family module Stable locus 4949plantsme
DXS1-deoxy-D-xylulose 5-phosphate synthase family Stable locus 2828plantsme
HMGR3-hydroxy-3-methylglutaryl-CoA reductase family Stable locus 2323plantsme
GPPSGeranyl diphosphate synthase family Stable locus 1818plantsme
HDR_IspHHDR / IspH enzyme-family module Stable locus 88plantsme
AACTAcetyl-CoA C-acetyltransferase family Stable locus 66plantsme
MVDMVD enzyme-family module Stable locus 66plantsme
GGPPSGeranylgeranyl diphosphate synthase family Stable locus 33plantsme
CMK_IspECMK / IspE enzyme-family module Stable locus 22plantsme
DXR1-deoxy-D-xylulose 5-phosphate reductoisomerase family Stable locus 22plantsme
HMGS3-hydroxy-3-methylglutaryl-CoA synthase family Stable locus 22plantsme
MCT_IspDMCT / IspD enzyme-family module Stable locus 22plantsme
MDS_IspFMDS / IspF enzyme-family module Stable locus 22plantsme
MVKMVK enzyme-family module Stable locus 22plantsme
PMKPMK enzyme-family module Stable locus 11plantsme

Phenylpropanoid

Phenylpropanoid biosynthesis

556 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
4CL4-coumarate--CoA ligase family Stable locus 14350plantsme
C3H_CYP98Ap-coumaroyl-shikimate/quinate 3-hydroxylase (CYP98A) family Stable locus 14250plantsme
C4H_CYP73ACinnamate 4-hydroxylase (CYP73A) family Stable locus 11250plantsme
CADCinnamyl-alcohol dehydrogenase family Stable locus 17550plantsme
CCRCinnamoyl-CoA reductase family Stable locus 22350plantsme
CCoAOMTCaffeoyl-CoA O-methyltransferase family Stable locus 8750plantsme
COMTCaffeic-acid O-methyltransferase family Stable locus 6050plantsme
CSECaffeoyl shikimate esterase family Stable locus 13850plantsme
HCTHydroxycinnamoyl-CoA shikimate/quinate transferase family Stable locus 25250plantsme
LACLAC enzyme-family module Stable locus 24950plantsme
PODClass III peroxidase family Stable locus 21450plantsme
PALPhenylalanine ammonia-lyase family Stable locus 55plantsme
F5H_CYP84AF5H / CYP84A enzyme-family module Stable locus 11plantsme

Rosmarinic acid

Rosmarinic-acid biosynthesis

0 recordsView records

No observed modules in this category

No family assignments are reported for this species in the current compatible source profile.

Flavonoid

Flavonoid biosynthesis

460 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
4CL4-coumarate--CoA ligase family Stable locus 14350plantsme
ANS_LDOXANS / LDOX enzyme-family module Stable locus 6750plantsme
C4HCinnamate 4-hydroxylase family Stable locus 13850plantsme
CHIChalcone isomerase family Stable locus 6450plantsme
DFRDihydroflavonol 4-reductase family Stable locus 10450plantsme
F3HFlavanone 3-hydroxylase family Stable locus 8950plantsme
F3H_CYP75BF3H / CYP75B enzyme-family module Stable locus 10250plantsme
UFGTUFGT enzyme-family module Stable locus 3030plantsme
IFRIFR enzyme-family module Stable locus 2121plantsme
CHSChalcone synthase family Stable locus 2020plantsme
PALPhenylalanine ammonia-lyase family Stable locus 1616plantsme
F35H_CYP75AF35H / CYP75A enzyme-family module Stable locus 1414plantsme
ANRANR enzyme-family module Stable locus 99plantsme

Alkaloid

Alkaloid-related biosynthesis

681 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
7DLGT7DLGT enzyme-family module Stable locus 42950plantsme
8HGO8HGO enzyme-family module Stable locus 6050plantsme
CODM_T6ODMCODM / T6ODM enzyme-family module Stable locus 10250plantsme
CORCOR enzyme-family module Stable locus 6050plantsme
GESGES enzyme-family module Stable locus 8550plantsme
NMTNMT enzyme-family module Stable locus 16850plantsme
PYKSPYKS enzyme-family module Stable locus 5750plantsme
SGDSGD enzyme-family module Stable locus 8150plantsme
STRSTR enzyme-family module Stable locus 15450plantsme
TRI_TRIITRI / TRII enzyme-family module Stable locus 37250plantsme
NCSNorcoclaurine synthase family Stable locus 4343plantsme
GSGS enzyme-family module Stable locus 2727plantsme
ODCODC enzyme-family module Stable locus 2424plantsme
PMTPMT enzyme-family module Stable locus 2020plantsme
MPOMPO enzyme-family module Stable locus 1414plantsme
7DLH7DLH enzyme-family module Stable locus 1010plantsme
ADCADC enzyme-family module Stable locus 1010plantsme
SLSSLS enzyme-family module Stable locus 77plantsme
TDCTDC enzyme-family module Stable locus 77plantsme
CYP719CYP719 enzyme-family module Stable locus 66plantsme
G8O_G8HG8O / G8H enzyme-family module Stable locus 66plantsme
ISYISY enzyme-family module Stable locus 44plantsme
CNMTCNMT enzyme-family module Stable locus 22plantsme
CYP80B1CYP80B1 enzyme-family module Stable locus 11plantsme

Steroid / sterol

Steroid and sterol biosynthesis

360 recordsView records
FamilyEvidence stateSource countCandidate IDsEvidence mode
CASCycloartenol synthase family Stable locus 12450plantsme
CYP51G1CYP51G1 enzyme-family module Stable locus 14850plantsme
SMT1_SMT2_SMT3SMT1 / SMT2 / SMT3 enzyme-family module Stable locus 11350plantsme
SMO1_SMO2SMO1 / SMO2 enzyme-family module Stable locus 4848plantsme
DWF1DWF1 enzyme-family module Stable locus 3636plantsme
DWF7DWF7 enzyme-family module Stable locus 2424plantsme
CPD_CYP90A1CPD / CYP90A1 enzyme-family module Stable locus 1919plantsme
DET2DET2 enzyme-family module Stable locus 1717plantsme
FKFK enzyme-family module Stable locus 1515plantsme
DWF4_CYP90B1DWF4 / CYP90B1 enzyme-family module Stable locus 1313plantsme
SQESQE enzyme-family module Stable locus 1111plantsme
SQS_FDFT1Squalene synthase / FDFT1 family Stable locus 1010plantsme
BR6OX1_CYP85A1BR6OX1 / CYP85A1 enzyme-family module Stable locus 99plantsme
HYD1HYD1 enzyme-family module Stable locus 44plantsme
CPI1CPI1 enzyme-family module Stable locus 22plantsme
ROT3_CYP90C1ROT3 / CYP90C1 enzyme-family module Stable locus 22plantsme

Interpretation

Evidence boundary

Stable locus

A concrete candidate identifier is provided and can be inspected.

Reference-only

A family count is available, but no locus ID is asserted for this module.

Computational candidates

Computational enzyme-family candidates and genome-structure support, not validated biochemical function.