Coordinate-aware organelle record

Isodon rubescens chloroplast genome

Available NC_053708.1 152,761 bp 129 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

129 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	10	84	74
psbA	gene	photosystem-ii	−	392	1451	1059
trnK-UUU	gene	translation-rna	−	1681	4263	2582
matK	gene	other	−	2002	3523	1521
rps16	gene	ribosomal-protein	−	4787	5933	1146
trnQ-UUG	gene	translation-rna	−	6877	6949	72
psbK	gene	photosystem-ii	+	7342	7528	186
psbI	gene	photosystem-ii	+	7916	8027	111
trnS-GCU	gene	translation-rna	−	8182	8270	88
trnT-CGU	gene	translation-rna	+	9030	9791	761
trnR-UCU	gene	translation-rna	+	9981	10053	72
atpA	gene	atp-synthase	−	10156	11680	1524
atpF	gene	atp-synthase	−	11784	13030	1246
atpH	gene	atp-synthase	−	13321	13567	246
atpI	gene	atp-synthase	−	14568	15312	744
rps2	gene	ribosomal-protein	−	15537	16248	711
rpoC2	gene	rna-polymerase	−	16464	20634	4170
rpoC1	gene	rna-polymerase	−	20810	23644	2834
rpoB	gene	rna-polymerase	−	23670	26883	3213
trnC-GCA	gene	translation-rna	+	28072	28143	71
petN	gene	cytochrome	+	28305	28395	90
psbM	gene	photosystem-ii	−	29387	29492	105
trnD-GUC	gene	translation-rna	−	30010	30084	74
trnY-GUA	gene	translation-rna	−	30194	30278	84
trnE-UUC	gene	translation-rna	−	30355	30428	73
trnT-GGU	gene	translation-rna	+	31037	31109	72
psbD	gene	photosystem-ii	+	32426	33488	1062
psbC	gene	photosystem-ii	+	33435	34857	1422
trnS-UGA	gene	translation-rna	−	35100	35193	93
psbZ	gene	photosystem-ii	+	35533	35722	189
trnG-GCC	gene	translation-rna	+	35966	36037	71
trnM-CAU	gene	translation-rna	−	36227	36301	74
rps14	gene	ribosomal-protein	−	36446	36749	303
psaB	gene	photosystem-i	−	36871	39076	2205
psaA	gene	photosystem-i	−	39101	41354	2253
ycf3	gene	other	−	42128	44076	1948
trnS-GGA	gene	translation-rna	+	44939	45026	87
rps4	gene	ribosomal-protein	−	45322	45928	606
trnT-UGU	gene	translation-rna	−	46341	46414	73
trnL-UAA	gene	translation-rna	+	47100	47665	565
trnF-GAA	gene	translation-rna	+	47958	48031	73
ndhJ	gene	nad-dehydrogenase	−	48698	49175	477
ndhK	gene	nad-dehydrogenase	−	49285	49963	678
ndhC	gene	nad-dehydrogenase	−	50014	50377	363
trnM-CAU	gene	translation-rna	+	52176	52249	73
atpE	gene	atp-synthase	−	52449	52851	402
atpB	gene	atp-synthase	−	52847	54344	1497
rbcL	gene	other	+	55113	56568	1455
accD	gene	other	+	57209	58760	1551
psaI	gene	photosystem-i	+	59459	59570	111
ycf4	gene	other	+	60017	60572	555
cemA	gene	other	+	61162	61852	690
petA	gene	cytochrome	+	62066	63029	963
psbJ	gene	photosystem-ii	−	64065	64188	123
psbL	gene	photosystem-ii	−	64322	64439	117
psbF	gene	photosystem-ii	−	64462	64582	120
psbE	gene	photosystem-ii	−	64596	64848	252
petL	gene	cytochrome	+	65740	65836	96
petG	gene	cytochrome	+	66010	66124	114
trnW-CCA	gene	translation-rna	−	66246	66320	74
trnP-UGG	gene	translation-rna	−	66488	66562	74
psaJ	gene	photosystem-i	+	66843	66978	135
rpl33	gene	ribosomal-protein	+	67439	67640	201
rps18	gene	ribosomal-protein	+	67806	68112	306
rpl20	gene	ribosomal-protein	−	68346	68733	387
rps12	gene	ribosomal-protein	−	69464	97731	28267
rps12	gene	ribosomal-protein	+	69464	139458	69994
clpP	gene	other	−	69696	71611	1915
psbB	gene	photosystem-ii	+	72083	73610	1527
psbT	gene	photosystem-ii	+	73793	73895	102
psbN	gene	photosystem-ii	−	74050	74182	132
psbH	gene	photosystem-ii	+	74287	74506	219
petB	gene	cytochrome	+	74631	75998	1367
petD	gene	cytochrome	+	76854	77379	525
rpoA	gene	rna-polymerase	−	77555	78563	1008
rps11	gene	ribosomal-protein	−	78634	79051	417
rpl36	gene	ribosomal-protein	−	79166	79280	114
infA	gene	other	−	79375	79609	234
rps8	gene	ribosomal-protein	−	79735	80140	405
rpl14	gene	ribosomal-protein	−	80322	80691	369
rpl16	gene	ribosomal-protein	−	80824	82092	1268
rps3	gene	ribosomal-protein	−	82235	82898	663
rpl22	gene	ribosomal-protein	−	82882	83356	474
rps19	gene	ribosomal-protein	−	83420	83699	279
rpl2	gene	ribosomal-protein	−	83766	85245	1479
rpl23	gene	ribosomal-protein	−	85263	85545	282
trnI-CAU	gene	translation-rna	−	85710	85784	74
ycf2	gene	other	+	85878	92709	6831
trnL-CAA	gene	translation-rna	−	93308	93389	81
ndhB	gene	nad-dehydrogenase	−	93960	96168	2208
rps7	gene	ribosomal-protein	−	96438	96906	468
trnV-GAC	gene	translation-rna	+	99413	99485	72
rrn16S	gene	ribosomal-rna	+	99711	101202	1491
trnI-GAU	gene	translation-rna	+	101499	102518	1019
trnA-UGC	gene	translation-rna	+	102582	103461	879
rrn23S	gene	ribosomal-rna	+	103632	106443	2811
rrn4.5S	gene	ribosomal-rna	−	106541	106806	265
rrn5S	gene	ribosomal-rna	+	106899	107030	131
trnR-ACG	gene	translation-rna	+	107263	107337	74
trnN-GUU	gene	translation-rna	−	107899	107971	72
ycf1	gene	other	+	108312	109443	1131
ndhF	gene	nad-dehydrogenase	−	109336	111568	2232
trnL-UAG	gene	translation-rna	+	112971	113051	80
ccsA	gene	other	+	113139	114111	972
ndhD	gene	nad-dehydrogenase	−	114343	115843	1500
psaC	gene	photosystem-i	−	115963	116209	246
ndhE	gene	nad-dehydrogenase	−	116464	116770	306
ndhG	gene	nad-dehydrogenase	−	116984	117515	531
ndhI	gene	nad-dehydrogenase	−	117873	118380	507
ndhA	gene	nad-dehydrogenase	−	118460	120583	2123
ndhH	gene	nad-dehydrogenase	−	120584	121766	1182
rps15	gene	ribosomal-protein	−	121880	122153	273
ycf1	gene	other	−	122582	125969	3387
trnN-GUU	gene	translation-rna	+	128446	128518	72
trnR-ACG	gene	translation-rna	−	129080	129154	74
rrn5S	gene	ribosomal-rna	−	129387	129518	131
rrn4.5S	gene	ribosomal-rna	+	129611	129876	265
rrn23S	gene	ribosomal-rna	−	129974	132785	2811
trnA-UGC	gene	translation-rna	−	132956	133835	879
trnI-GAU	gene	translation-rna	−	133899	134918	1019
rrn16S	gene	ribosomal-rna	−	135215	136706	1491
trnV-GAC	gene	translation-rna	−	136932	137004	72
rps7	gene	ribosomal-protein	+	139511	139979	468
ndhB	gene	nad-dehydrogenase	+	140249	142457	2208
trnL-CAA	gene	translation-rna	+	143028	143109	81
ycf2	gene	other	−	143708	150539	6831
trnI-CAU	gene	translation-rna	+	150633	150707	74
rpl23	gene	ribosomal-protein	+	150872	151154	282
rpl2	gene	ribosomal-protein	+	151172	152651	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_053708.1DNA · accDNC_053708DNA · atpBNC_053708DNA · matKNC_053708DNA · ndhFNC_053708DNA · psbANC_053708DNA · rbcLNC_053708DNA · rps12NC_053708DNA · ycf1NC_053708