Coordinate-aware organelle record

Leonurus japonicus chloroplast genome

Available NC_038062.1 151,610 bp 124 coordinate-linked features
0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GTG · gene · 2-75 bp · − strandpsbA · gene · 308-1,366 bp · − strandmatK · gene · 1,901-3,436 bp · − strandrps16 · gene · 5,104-6,247 bp · − strandtrnQ-TTG · gene · 6,924-6,995 bp · − strandpsbK · gene · 7,332-7,517 bp · + strandpsbI · gene · 7,902-8,012 bp · + strandtrnS-GCT · gene · 8,140-8,227 bp · − strandtrnR-TCT · gene · 9,865-9,936 bp · + strandatpA · gene · 10,033-11,556 bp · − strandatpF · gene · 11,644-12,853 bp · − strandatpH · gene · 13,215-13,460 bp · − strandatpI · gene · 14,389-15,132 bp · − strandrps2 · gene · 15,363-16,073 bp · − strandrpoC2 · gene · 16,293-20,483 bp · − strandrpoC1 · gene · 20,638-23,477 bp · − strandrpoB · gene · 23,504-26,716 bp · − strandtrnC-GCA · gene · 27,818-27,888 bp · + strandpetN · gene · 28,712-28,807 bp · + strandpsbM · gene · 29,592-29,696 bp · − strandtrnD-GTC · gene · 30,226-30,299 bp · − strandtrnY-GTA · gene · 30,414-30,497 bp · − strandtrnE-TTC · gene · 30,557-30,629 bp · − strandtrnT-GGT · gene · 31,220-31,291 bp · + strandpsbD · gene · 32,432-33,493 bp · + strandpsbC · gene · 33,441-34,862 bp · + strandtrnS-TGA · gene · 35,094-35,186 bp · − strandpsbZ · gene · 35,513-35,701 bp · + strandtrnG-GCC · gene · 35,928-35,998 bp · + strandtrnM-CAT · gene · 36,147-36,220 bp · − strandrps14 · gene · 36,370-36,672 bp · − strandpsaB · gene · 36,800-39,004 bp · − strandpsaA · gene · 39,030-41,282 bp · − strandycf3 · gene · 42,012-43,952 bp · − strandtrnS-GGA · gene · 44,269-44,355 bp · + strandrps4 · gene · 44,640-45,245 bp · − strandtrnT-TGT · gene · 45,630-45,702 bp · − strandtrnF-GAA · gene · 47,246-47,318 bp · + strandndhJ · gene · 47,998-48,474 bp · − strandndhK · gene · 48,575-49,252 bp · − strandndhC · gene · 49,305-49,667 bp · − strandtrnM-CAT · gene · 51,470-51,542 bp · + strandatpE · gene · 51,760-52,161 bp · − strandatpB · gene · 52,158-53,654 bp · − strandrbcL · gene · 54,465-55,910 bp · + strandaccD · gene · 56,600-58,066 bp · + strandpsaI · gene · 58,757-58,867 bp · + strandycf4 · gene · 59,306-59,860 bp · + strandcemA · gene · 60,421-61,110 bp · + strandpetA · gene · 61,327-62,289 bp · + strandpsbJ · gene · 63,304-63,426 bp · − strandpsbL · gene · 63,564-63,680 bp · − strandpsbF · gene · 63,704-63,823 bp · − strandpsbE · gene · 63,838-64,089 bp · − strandpetL · gene · 65,010-65,105 bp · + strandpetG · gene · 65,280-65,393 bp · + strandtrnW-CCA · gene · 65,519-65,592 bp · − strandtrnP-TGG · gene · 65,744-65,817 bp · − strandpsaJ · gene · 66,092-66,226 bp · + strandrpl33 · gene · 66,698-66,898 bp · + strandrps18 · gene · 67,046-67,351 bp · + strandrpl20 · gene · 67,567-67,953 bp · − strandrps12 · gene · 68,716-96,874 bp · − strandrps12 · gene · 68,716-137,806 bp · + strandclpP · gene · 68,968-70,842 bp · − strandpsbB · gene · 71,274-72,800 bp · + strandpsbT · gene · 72,991-73,098 bp · + strandpsbN · gene · 73,159-73,290 bp · − strandpsbH · gene · 73,394-73,615 bp · + strandpetB · gene · 73,740-75,126 bp · + strandpetD · gene · 75,321-76,545 bp · + strandrpoA · gene · 76,714-77,733 bp · − strandrps11 · gene · 77,805-78,221 bp · − strandrpl36 · gene · 78,324-78,437 bp · − strandinfA · gene · 78,533-78,766 bp · − strandrps8 · gene · 78,897-79,310 bp · − strandrpl14 · gene · 79,487-79,855 bp · − strandrpl16 · gene · 79,982-81,273 bp · − strandrps3 · gene · 81,420-82,082 bp · − strandrpl22 · gene · 82,067-82,531 bp · − strandrps19 · gene · 82,591-82,863 bp · − strandrpl2 · gene · 82,922-84,412 bp · − strandrpl23 · gene · 84,431-84,712 bp · − strandtrnI-CAT · gene · 84,878-84,951 bp · − strandycf2 · gene · 85,040-91,897 bp · + strandycf15 · gene · 91,940-92,188 bp · + strandtrnL-CAA · gene · 92,449-92,529 bp · − strandndhB · gene · 93,074-95,285 bp · − strandrps7 · gene · 95,560-96,027 bp · − strandtrnV-GAC · gene · 98,491-98,562 bp · + strandrrn16S · gene · 98,790-100,280 bp · − strandrrn23S · gene · 102,713-105,523 bp · − strandrrn4.5S · gene · 105,622-105,886 bp · − strandrrn5S · gene · 105,980-106,110 bp · + strandtrnR-ACG · gene · 106,335-106,408 bp · + strandtrnN-GTT · gene · 106,981-107,052 bp · − strandycf1 · gene · 107,378-108,496 bp · + strandndhF · gene · 108,442-110,664 bp · − strandrpl32 · gene · 111,176-111,352 bp · + strandtrnL-TAG · gene · 111,950-112,029 bp · + strandccsA · gene · 112,137-113,099 bp · + strandndhD · gene · 113,278-114,687 bp · − strandpsaC · gene · 114,900-115,145 bp · − strandndhE · gene · 115,410-115,715 bp · − strandndhG · gene · 115,923-116,453 bp · − strandndhI · gene · 116,838-117,344 bp · − strandndhA · gene · 117,431-119,601 bp · − strandndhH · gene · 119,603-120,784 bp · − strandrps15 · gene · 120,885-121,157 bp · − strandycf1 · gene · 121,544-127,060 bp · − strandtrnN-GTT · gene · 127,386-127,457 bp · + strandtrnR-ACG · gene · 128,030-128,103 bp · − strandrrn5S · gene · 128,328-128,458 bp · − strandrrn4.5S · gene · 128,552-128,816 bp · + strandrrn23S · gene · 128,915-131,725 bp · + strandtrnV-GAC · gene · 135,876-135,947 bp · − strandrps7 · gene · 138,411-138,878 bp · + strandndhB · gene · 139,153-141,364 bp · + strandtrnL-CAA · gene · 141,909-141,989 bp · + strandycf15 · gene · 142,250-142,498 bp · − strandycf2 · gene · 142,541-149,398 bp · − strandtrnI-CAT · gene · 149,487-149,560 bp · + strandrpl23 · gene · 149,726-150,007 bp · + strandrpl2 · gene · 150,026-151,516 bp · + strandLeonurus japonicusANNOTATED PLASTOMENC_038062.1151,610 bp · 124 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_038062.1Features: 124 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

124 features
GeneTypeGroupStrandStartEndLength
trnH-GTGgenetranslation-rna−17574
psbAgenephotosystem-ii−30713661059
matKgeneother−190034361536
rps16generibosomal-protein−510362471144
trnQ-TTGgenetranslation-rna−6923699572
psbKgenephotosystem-ii+73317517186
psbIgenephotosystem-ii+79018012111
trnS-GCTgenetranslation-rna−8139822788
trnR-TCTgenetranslation-rna+9864993672
atpAgeneatp-synthase−10032115561524
atpFgeneatp-synthase−11643128531210
atpHgeneatp-synthase−1321413460246
atpIgeneatp-synthase−1438815132744
rps2generibosomal-protein−1536216073711
rpoC2generna-polymerase−16292204834191
rpoC1generna-polymerase−20637234772840
rpoBgenerna-polymerase−23503267163213
trnC-GCAgenetranslation-rna+278172788871
petNgenecytochrome+287112880796
psbMgenephotosystem-ii−2959129696105
trnD-GTCgenetranslation-rna−302253029974
trnY-GTAgenetranslation-rna−304133049784
trnE-TTCgenetranslation-rna−305563062973
trnT-GGTgenetranslation-rna+312193129172
psbDgenephotosystem-ii+32431334931062
psbCgenephotosystem-ii+33440348621422
trnS-TGAgenetranslation-rna−350933518693
psbZgenephotosystem-ii+3551235701189
trnG-GCCgenetranslation-rna+359273599871
trnM-CATgenetranslation-rna−361463622074
rps14generibosomal-protein−3636936672303
psaBgenephotosystem-i−36799390042205
psaAgenephotosystem-i−39029412822253
ycf3geneother−42011439521941
trnS-GGAgenetranslation-rna+442684435587
rps4generibosomal-protein−4463945245606
trnT-TGTgenetranslation-rna−456294570273
trnF-GAAgenetranslation-rna+472454731873
ndhJgenenad-dehydrogenase−4799748474477
ndhKgenenad-dehydrogenase−4857449252678
ndhCgenenad-dehydrogenase−4930449667363
trnM-CATgenetranslation-rna+514695154273
atpEgeneatp-synthase−5175952161402
atpBgeneatp-synthase−52157536541497
rbcLgeneother+54464559101446
accDgeneother+56599580661467
psaIgenephotosystem-i+5875658867111
ycf4geneother+5930559860555
cemAgeneother+6042061110690
petAgenecytochrome+6132662289963
psbJgenephotosystem-ii−6330363426123
psbLgenephotosystem-ii−6356363680117
psbFgenephotosystem-ii−6370363823120
psbEgenephotosystem-ii−6383764089252
petLgenecytochrome+650096510596
petGgenecytochrome+6527965393114
trnW-CCAgenetranslation-rna−655186559274
trnP-TGGgenetranslation-rna−657436581774
psaJgenephotosystem-i+6609166226135
rpl33generibosomal-protein+6669766898201
rps18generibosomal-protein+6704567351306
rpl20generibosomal-protein−6756667953387
rps12generibosomal-protein−687159687428159
rps12generibosomal-protein+6871513780669091
clpPgeneother−68967708421875
psbBgenephotosystem-ii+71273728001527
psbTgenephotosystem-ii+7299073098108
psbNgenephotosystem-ii−7315873290132
psbHgenephotosystem-ii+7339373615222
petBgenecytochrome+73739751261387
petDgenecytochrome+75320765451225
rpoAgenerna-polymerase−76713777331020
rps11generibosomal-protein−7780478221417
rpl36generibosomal-protein−7832378437114
infAgeneother−7853278766234
rps8generibosomal-protein−7889679310414
rpl14generibosomal-protein−7948679855369
rpl16generibosomal-protein−79981812731292
rps3generibosomal-protein−8141982082663
rpl22generibosomal-protein−8206682531465
rps19generibosomal-protein−8259082863273
rpl2generibosomal-protein−82921844121491
rpl23generibosomal-protein−8443084712282
trnI-CATgenetranslation-rna−848778495174
ycf2geneother+85039918976858
ycf15geneother+9193992188249
trnL-CAAgenetranslation-rna−924489252981
ndhBgenenad-dehydrogenase−93073952852212
rps7generibosomal-protein−9555996027468
trnV-GACgenetranslation-rna+984909856272
rrn16Sgeneribosomal-rna−987891002801491
rrn23Sgeneribosomal-rna−1027121055232811
rrn4.5Sgeneribosomal-rna−105621105886265
rrn5Sgeneribosomal-rna+105979106110131
trnR-ACGgenetranslation-rna+10633410640874
trnN-GTTgenetranslation-rna−10698010705272
ycf1geneother+1073771084961119
ndhFgenenad-dehydrogenase−1084411106642223
rpl32generibosomal-protein+111175111352177
trnL-TAGgenetranslation-rna+11194911202980
ccsAgeneother+112136113099963
ndhDgenenad-dehydrogenase−1132771146871410
psaCgenephotosystem-i−114899115145246
ndhEgenenad-dehydrogenase−115409115715306
ndhGgenenad-dehydrogenase−115922116453531
ndhIgenenad-dehydrogenase−116837117344507
ndhAgenenad-dehydrogenase−1174301196012171
ndhHgenenad-dehydrogenase−1196021207841182
rps15generibosomal-protein−120884121157273
ycf1geneother−1215431270605517
trnN-GTTgenetranslation-rna+12738512745772
trnR-ACGgenetranslation-rna−12802912810374
rrn5Sgeneribosomal-rna−128327128458131
rrn4.5Sgeneribosomal-rna+128551128816265
rrn23Sgeneribosomal-rna+1289141317252811
trnV-GACgenetranslation-rna−13587513594772
rps7generibosomal-protein+138410138878468
ndhBgenenad-dehydrogenase+1391521413642212
trnL-CAAgenetranslation-rna+14190814198981
ycf15geneother−142249142498249
ycf2geneother−1425401493986858
trnI-CATgenetranslation-rna+14948614956074
rpl23generibosomal-protein+149725150007282
rpl2generibosomal-protein+1500251515161491

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources