LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 gene sequences

Coordinate-aware organelle record

Leonurus japonicus chloroplast dna

Available NC_038062.1 151,610 bp 124 genes
Accession record
Leonurus japonicus chloroplast Biopython GenomeDiagram 1.79; GenBank local location segments. trnH-GTG · NC_038062.1 · 2–75 bp · − psbA · NC_038062.1 · 308–1,366 bp · − matK · NC_038062.1 · 1,901–3,436 bp · − rps16 · NC_038062.1 · 5,104–6,247 bp · − trnQ-TTG · NC_038062.1 · 6,924–6,995 bp · − trnS-GCT · NC_038062.1 · 8,140–8,227 bp · − atpA · NC_038062.1 · 10,033–11,556 bp · − atpF · NC_038062.1 · 11,644–12,853 bp · − atpH · NC_038062.1 · 13,215–13,460 bp · − atpI · NC_038062.1 · 14,389–15,132 bp · − rps2 · NC_038062.1 · 15,363–16,073 bp · − rpoC2 · NC_038062.1 · 16,293–20,483 bp · − rpoC1 · NC_038062.1 · 20,638–23,477 bp · − rpoB · NC_038062.1 · 23,504–26,716 bp · − psbM · NC_038062.1 · 29,592–29,696 bp · − trnD-GTC · NC_038062.1 · 30,226–30,299 bp · − trnY-GTA · NC_038062.1 · 30,414–30,497 bp · − trnE-TTC · NC_038062.1 · 30,557–30,629 bp · − trnS-TGA · NC_038062.1 · 35,094–35,186 bp · − trnM-CAT · NC_038062.1 · 36,147–36,220 bp · − rps14 · NC_038062.1 · 36,370–36,672 bp · − psaB · NC_038062.1 · 36,800–39,004 bp · − psaA · NC_038062.1 · 39,030–41,282 bp · − ycf3 · NC_038062.1 · 42,012–43,952 bp · − rps4 · NC_038062.1 · 44,640–45,245 bp · − trnT-TGT · NC_038062.1 · 45,630–45,702 bp · − ndhJ · NC_038062.1 · 47,998–48,474 bp · − ndhK · NC_038062.1 · 48,575–49,252 bp · − ndhC · NC_038062.1 · 49,305–49,667 bp · − atpE · NC_038062.1 · 51,760–52,161 bp · − atpB · NC_038062.1 · 52,158–53,654 bp · − psbJ · NC_038062.1 · 63,304–63,426 bp · − psbL · NC_038062.1 · 63,564–63,680 bp · − psbF · NC_038062.1 · 63,704–63,823 bp · − psbE · NC_038062.1 · 63,838–64,089 bp · − trnW-CCA · NC_038062.1 · 65,519–65,592 bp · − trnP-TGG · NC_038062.1 · 65,744–65,817 bp · − rpl20 · NC_038062.1 · 67,567–67,953 bp · − rps12 · NC_038062.1 · 68,716–68,829 bp · − rps12 · NC_038062.1 · 96,632–96,874 bp · − clpP · NC_038062.1 · 68,968–70,842 bp · − psbN · NC_038062.1 · 73,159–73,290 bp · − rpoA · NC_038062.1 · 76,714–77,733 bp · − rps11 · NC_038062.1 · 77,805–78,221 bp · − rpl36 · NC_038062.1 · 78,324–78,437 bp · − infA · NC_038062.1 · 78,533–78,766 bp · − rps8 · NC_038062.1 · 78,897–79,310 bp · − rpl14 · NC_038062.1 · 79,487–79,855 bp · − rpl16 · NC_038062.1 · 79,982–81,273 bp · − rps3 · NC_038062.1 · 81,420–82,082 bp · − rpl22 · NC_038062.1 · 82,067–82,531 bp · − rps19 · NC_038062.1 · 82,591–82,863 bp · − rpl2 · NC_038062.1 · 82,922–84,412 bp · − rpl23 · NC_038062.1 · 84,431–84,712 bp · − trnI-CAT · NC_038062.1 · 84,878–84,951 bp · − trnL-CAA · NC_038062.1 · 92,449–92,529 bp · − ndhB · NC_038062.1 · 93,074–95,285 bp · − rps7 · NC_038062.1 · 95,560–96,027 bp · − rrn16S · NC_038062.1 · 98,790–100,280 bp · − rrn23S · NC_038062.1 · 102,713–105,523 bp · − rrn4.5S · NC_038062.1 · 105,622–105,886 bp · − trnN-GTT · NC_038062.1 · 106,981–107,052 bp · − ndhF · NC_038062.1 · 108,442–110,664 bp · − ndhD · NC_038062.1 · 113,278–114,687 bp · − psaC · NC_038062.1 · 114,900–115,145 bp · − ndhE · NC_038062.1 · 115,410–115,715 bp · − ndhG · NC_038062.1 · 115,923–116,453 bp · − ndhI · NC_038062.1 · 116,838–117,344 bp · − ndhA · NC_038062.1 · 117,431–119,601 bp · − ndhH · NC_038062.1 · 119,603–120,784 bp · − rps15 · NC_038062.1 · 120,885–121,157 bp · − ycf1 · NC_038062.1 · 121,544–127,060 bp · − trnR-ACG · NC_038062.1 · 128,030–128,103 bp · − rrn5S · NC_038062.1 · 128,328–128,458 bp · − trnV-GAC · NC_038062.1 · 135,876–135,947 bp · − ycf15 · NC_038062.1 · 142,250–142,498 bp · − ycf2 · NC_038062.1 · 142,541–149,398 bp · − psbK · NC_038062.1 · 7,332–7,517 bp · + psbI · NC_038062.1 · 7,902–8,012 bp · + trnR-TCT · NC_038062.1 · 9,865–9,936 bp · + trnC-GCA · NC_038062.1 · 27,818–27,888 bp · + petN · NC_038062.1 · 28,712–28,807 bp · + trnT-GGT · NC_038062.1 · 31,220–31,291 bp · + psbD · NC_038062.1 · 32,432–33,493 bp · + psbC · NC_038062.1 · 33,441–34,862 bp · + psbZ · NC_038062.1 · 35,513–35,701 bp · + trnG-GCC · NC_038062.1 · 35,928–35,998 bp · + trnS-GGA · NC_038062.1 · 44,269–44,355 bp · + trnF-GAA · NC_038062.1 · 47,246–47,318 bp · + trnM-CAT · NC_038062.1 · 51,470–51,542 bp · + rbcL · NC_038062.1 · 54,465–55,910 bp · + accD · NC_038062.1 · 56,600–58,066 bp · + psaI · NC_038062.1 · 58,757–58,867 bp · + ycf4 · NC_038062.1 · 59,306–59,860 bp · + cemA · NC_038062.1 · 60,421–61,110 bp · + petA · NC_038062.1 · 61,327–62,289 bp · + petL · NC_038062.1 · 65,010–65,105 bp · + petG · NC_038062.1 · 65,280–65,393 bp · + psaJ · NC_038062.1 · 66,092–66,226 bp · + rpl33 · NC_038062.1 · 66,698–66,898 bp · + rps18 · NC_038062.1 · 67,046–67,351 bp · + rps12 · NC_038062.1 · 137,564–137,806 bp · + psbB · NC_038062.1 · 71,274–72,800 bp · + psbT · NC_038062.1 · 72,991–73,098 bp · + psbH · NC_038062.1 · 73,394–73,615 bp · + petB · NC_038062.1 · 73,740–75,126 bp · + petD · NC_038062.1 · 75,321–76,545 bp · + ycf2 · NC_038062.1 · 85,040–91,897 bp · + ycf15 · NC_038062.1 · 91,940–92,188 bp · + trnV-GAC · NC_038062.1 · 98,491–98,562 bp · + rrn5S · NC_038062.1 · 105,980–106,110 bp · + trnR-ACG · NC_038062.1 · 106,335–106,408 bp · + ycf1 · NC_038062.1 · 107,378–108,496 bp · + rpl32 · NC_038062.1 · 111,176–111,352 bp · + trnL-TAG · NC_038062.1 · 111,950–112,029 bp · + ccsA · NC_038062.1 · 112,137–113,099 bp · + trnN-GTT · NC_038062.1 · 127,386–127,457 bp · + rrn4.5S · NC_038062.1 · 128,552–128,816 bp · + rrn23S · NC_038062.1 · 128,915–131,725 bp · + rps7 · NC_038062.1 · 138,411–138,878 bp · + ndhB · NC_038062.1 · 139,153–141,364 bp · + trnL-CAA · NC_038062.1 · 141,909–141,989 bp · + trnI-CAT · NC_038062.1 · 149,487–149,560 bp · + rpl23 · NC_038062.1 · 149,726–150,007 bp · + rpl2 · NC_038062.1 · 150,026–151,516 bp · + 0 kb 13 kb 26 kb 39 kb 52 kb 65 kb 78 kb 91 kb 104 kb 117 kb 130 kb 143 kb Leonurus japonicus ANNOTATED PLASTOME NC_038062.1 151,610 bp · 124 genes Gene function Transfer RNA Photosystem II Other Ribosomal protein ATP synthase RNA polymerase Cytochrome Photosystem I NADH dehydrogenase Ribosomal RNA

Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram.

Gene-position browser

Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.

125 local segments
GeneTypeGroupStrandStartEndLength
trnH-GTGgenetranslation-rna−27574
psbAgenephotosystem-ii−30813661059
matKgeneother−190134361536
rps16generibosomal-protein−510462471144
trnQ-TTGgenetranslation-rna−6924699572
psbKgenephotosystem-ii+73327517186
psbIgenephotosystem-ii+79028012111
trnS-GCTgenetranslation-rna−8140822788
trnR-TCTgenetranslation-rna+9865993672
atpAgeneatp-synthase−10033115561524
atpFgeneatp-synthase−11644128531210
atpHgeneatp-synthase−1321513460246
atpIgeneatp-synthase−1438915132744
rps2generibosomal-protein−1536316073711
rpoC2generna-polymerase−16293204834191
rpoC1generna-polymerase−20638234772840
rpoBgenerna-polymerase−23504267163213
trnC-GCAgenetranslation-rna+278182788871
petNgenecytochrome+287122880796
psbMgenephotosystem-ii−2959229696105
trnD-GTCgenetranslation-rna−302263029974
trnY-GTAgenetranslation-rna−304143049784
trnE-TTCgenetranslation-rna−305573062973
trnT-GGTgenetranslation-rna+312203129172
psbDgenephotosystem-ii+32432334931062
psbCgenephotosystem-ii+33441348621422
trnS-TGAgenetranslation-rna−350943518693
psbZgenephotosystem-ii+3551335701189
trnG-GCCgenetranslation-rna+359283599871
trnM-CATgenetranslation-rna−361473622074
rps14generibosomal-protein−3637036672303
psaBgenephotosystem-i−36800390042205
psaAgenephotosystem-i−39030412822253
ycf3geneother−42012439521941
trnS-GGAgenetranslation-rna+442694435587
rps4generibosomal-protein−4464045245606
trnT-TGTgenetranslation-rna−456304570273
trnF-GAAgenetranslation-rna+472464731873
ndhJgenenad-dehydrogenase−4799848474477
ndhKgenenad-dehydrogenase−4857549252678
ndhCgenenad-dehydrogenase−4930549667363
trnM-CATgenetranslation-rna+514705154273
atpEgeneatp-synthase−5176052161402
atpBgeneatp-synthase−52158536541497
rbcLgeneother+54465559101446
accDgeneother+56600580661467
psaIgenephotosystem-i+5875758867111
ycf4geneother+5930659860555
cemAgeneother+6042161110690
petAgenecytochrome+6132762289963
psbJgenephotosystem-ii−6330463426123
psbLgenephotosystem-ii−6356463680117
psbFgenephotosystem-ii−6370463823120
psbEgenephotosystem-ii−6383864089252
petLgenecytochrome+650106510596
petGgenecytochrome+6528065393114
trnW-CCAgenetranslation-rna−655196559274
trnP-TGGgenetranslation-rna−657446581774
psaJgenephotosystem-i+6609266226135
rpl33generibosomal-protein+6669866898201
rps18generibosomal-protein+6704667351306
rpl20generibosomal-protein−6756767953387
rps12generibosomal-protein−6871668829114
clpPgeneother−68968708421875
psbBgenephotosystem-ii+71274728001527
psbTgenephotosystem-ii+7299173098108
psbNgenephotosystem-ii−7315973290132
psbHgenephotosystem-ii+7339473615222
petBgenecytochrome+73740751261387
petDgenecytochrome+75321765451225
rpoAgenerna-polymerase−76714777331020
rps11generibosomal-protein−7780578221417
rpl36generibosomal-protein−7832478437114
infAgeneother−7853378766234
rps8generibosomal-protein−7889779310414
rpl14generibosomal-protein−7948779855369
rpl16generibosomal-protein−79982812731292
rps3generibosomal-protein−8142082082663
rpl22generibosomal-protein−8206782531465
rps19generibosomal-protein−8259182863273
rpl2generibosomal-protein−82922844121491
rpl23generibosomal-protein−8443184712282
trnI-CATgenetranslation-rna−848788495174
ycf2geneother+85040918976858
ycf15geneother+9194092188249
trnL-CAAgenetranslation-rna−924499252981
ndhBgenenad-dehydrogenase−93074952852212
rps7generibosomal-protein−9556096027468
rps12generibosomal-protein−9663296874243
trnV-GACgenetranslation-rna+984919856272
rrn16Sgeneribosomal-rna−987901002801491
rrn23Sgeneribosomal-rna−1027131055232811
rrn4.5Sgeneribosomal-rna−105622105886265
rrn5Sgeneribosomal-rna+105980106110131
trnR-ACGgenetranslation-rna+10633510640874
trnN-GTTgenetranslation-rna−10698110705272
ycf1geneother+1073781084961119
ndhFgenenad-dehydrogenase−1084421106642223
rpl32generibosomal-protein+111176111352177
trnL-TAGgenetranslation-rna+11195011202980
ccsAgeneother+112137113099963
ndhDgenenad-dehydrogenase−1132781146871410
psaCgenephotosystem-i−114900115145246
ndhEgenenad-dehydrogenase−115410115715306
ndhGgenenad-dehydrogenase−115923116453531
ndhIgenenad-dehydrogenase−116838117344507
ndhAgenenad-dehydrogenase−1174311196012171
ndhHgenenad-dehydrogenase−1196031207841182
rps15generibosomal-protein−120885121157273
ycf1geneother−1215441270605517
trnN-GTTgenetranslation-rna+12738612745772
trnR-ACGgenetranslation-rna−12803012810374
rrn5Sgeneribosomal-rna−128328128458131
rrn4.5Sgeneribosomal-rna+128552128816265
rrn23Sgeneribosomal-rna+1289151317252811
trnV-GACgenetranslation-rna−13587613594772
rps12generibosomal-protein+137564137806243
rps7generibosomal-protein+138411138878468
ndhBgenenad-dehydrogenase+1391531413642212
trnL-CAAgenetranslation-rna+14190914198981
ycf15geneother−142250142498249
ycf2geneother−1425411493986858
trnI-CATgenetranslation-rna+14948714956074
rpl23generibosomal-protein+149726150007282
rpl2generibosomal-protein+1500261515161491

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources
Chloroplast DNANC_038062.1