Leucas ciliata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV802396.1 · 2–75 bp · −
psbA · PV802396.1 · 294–1,352 bp · −
trnK-UUU · PV802396.1 · 1,583–4,167 bp · −
matK · PV802396.1 · 1,883–3,418 bp · −
rps16 · PV802396.1 · 5,072–6,214 bp · −
trnQ-UUG · PV802396.1 · 7,167–7,238 bp · −
trnS-GCU · PV802396.1 · 8,380–8,467 bp · −
atpA · PV802396.1 · 10,245–11,768 bp · −
atpF · PV802396.1 · 11,875–13,092 bp · −
atpH · PV802396.1 · 13,459–13,704 bp · −
atpI · PV802396.1 · 14,694–15,437 bp · −
rps2 · PV802396.1 · 15,662–16,372 bp · −
rpoC2 · PV802396.1 · 16,593–20,786 bp · −
rpoC1 · PV802396.1 · 20,941–23,768 bp · −
rpoB · PV802396.1 · 23,795–27,007 bp · −
psbM · PV802396.1 · 29,691–29,795 bp · −
trnD-GUC · PV802396.1 · 30,325–30,398 bp · −
trnY-GUA · PV802396.1 · 30,512–30,595 bp · −
trnE-UUC · PV802396.1 · 30,655–30,727 bp · −
trnS-UGA · PV802396.1 · 35,014–35,106 bp · −
trnM-CAU · PV802396.1 · 36,079–36,152 bp · −
rps14 · PV802396.1 · 36,302–36,604 bp · −
psaB · PV802396.1 · 36,732–38,936 bp · −
psaA · PV802396.1 · 38,962–41,214 bp · −
ycf3 · PV802396.1 · 41,896–43,821 bp · −
rps4 · PV802396.1 · 44,505–45,110 bp · −
trnT-UGU · PV802396.1 · 45,504–45,576 bp · −
ndhJ · PV802396.1 · 47,835–48,311 bp · −
ndhK · PV802396.1 · 48,406–49,083 bp · −
ndhC · PV802396.1 · 49,136–49,498 bp · −
trnI-AAU · PV802396.1 · 50,465–51,110 bp · −
atpE · PV802396.1 · 51,575–51,976 bp · −
atpB · PV802396.1 · 51,973–53,469 bp · −
psbJ · PV802396.1 · 63,015–63,137 bp · −
psbL · PV802396.1 · 63,275–63,391 bp · −
psbF · PV802396.1 · 63,415–63,534 bp · −
psbE · PV802396.1 · 63,549–63,800 bp · −
trnW-CCA · PV802396.1 · 65,237–65,310 bp · −
trnP-UGG · PV802396.1 · 65,474–65,547 bp · −
rpl20 · PV802396.1 · 67,272–67,658 bp · −
rps12 · PV802396.1 · 68,397–68,510 bp · −
rps12 · PV802396.1 · 95,663–96,455 bp · −
clpP · PV802396.1 · 68,643–70,533 bp · −
psbN · PV802396.1 · 72,802–72,933 bp · −
rpoA · PV802396.1 · 76,325–77,344 bp · −
rps11 · PV802396.1 · 77,416–77,832 bp · −
rpl36 · PV802396.1 · 77,935–78,048 bp · −
infA · PV802396.1 · 78,144–78,377 bp · −
rps8 · PV802396.1 · 78,501–78,914 bp · −
rpl14 · PV802396.1 · 79,082–79,450 bp · −
rpl16 · PV802396.1 · 79,577–80,872 bp · −
rps3 · PV802396.1 · 81,020–81,682 bp · −
rpl22 · PV802396.1 · 81,667–82,116 bp · −
rps19 · PV802396.1 · 82,176–82,454 bp · −
rpl2 · PV802396.1 · 82,506–83,997 bp · −
rpl23 · PV802396.1 · 84,016–84,297 bp · −
trnM-CAU · PV802396.1 · 84,463–84,536 bp · −
trnL-CAA · PV802396.1 · 92,037–92,117 bp · −
ndhB · PV802396.1 · 92,656–94,867 bp · −
rps7 · PV802396.1 · 95,142–95,609 bp · −
trnN-GUU · PV802396.1 · 106,555–106,626 bp · −
ndhF · PV802396.1 · 108,016–110,238 bp · −
ndhD · PV802396.1 · 112,952–114,487 bp · −
psaC · PV802396.1 · 114,582–114,827 bp · −
ndhE · PV802396.1 · 115,089–115,394 bp · −
ndhG · PV802396.1 · 115,625–116,155 bp · −
ndhI · PV802396.1 · 116,532–117,038 bp · −
ndhA · PV802396.1 · 117,125–119,253 bp · −
ndhH · PV802396.1 · 119,255–120,436 bp · −
rps15 · PV802396.1 · 120,537–120,809 bp · −
ycf1 · PV802396.1 · 121,183–126,720 bp · −
trnR-ACG · PV802396.1 · 127,698–127,771 bp · −
rrn5S · PV802396.1 · 128,006–128,126 bp · −
rrn4.5S · PV802396.1 · 128,382–128,484 bp · −
rrn23S · PV802396.1 · 128,583–131,392 bp · −
trnA-UGC · PV802396.1 · 131,592–132,470 bp · −
trnI · PV802396.1 · 132,535–133,542 bp · −
rrn16S · PV802396.1 · 133,832–135,322 bp · −
trnV-GAC · PV802396.1 · 135,550–135,621 bp · −
ycf15 · PV802396.1 · 141,891–142,088 bp · −
psbK · PV802396.1 · 7,575–7,760 bp · +
psbI · PV802396.1 · 8,148–8,258 bp · +
trnS-CGA · PV802396.1 · 9,155–9,903 bp · +
trnR-UCU · PV802396.1 · 10,077–10,148 bp · +
trnC-GCA · PV802396.1 · 27,900–27,970 bp · +
petN · PV802396.1 · 28,799–28,888 bp · +
trnT-GGU · PV802396.1 · 31,149–31,220 bp · +
psbD · PV802396.1 · 32,352–33,413 bp · +
psbC · PV802396.1 · 33,361–34,782 bp · +
psbZ · PV802396.1 · 35,433–35,621 bp · +
trnG-GCC · PV802396.1 · 35,849–35,919 bp · +
trnS-GGA · PV802396.1 · 44,136–44,222 bp · +
trnL-UAA · PV802396.1 · 46,231–46,808 bp · +
trnF-GAA · PV802396.1 · 47,099–47,171 bp · +
trnM-CAU · PV802396.1 · 51,299–51,371 bp · +
rbcL · PV802396.1 · 54,265–55,710 bp · +
accD · PV802396.1 · 56,409–57,881 bp · +
psaI · PV802396.1 · 58,478–58,588 bp · +
ycf4 · PV802396.1 · 59,027–59,581 bp · +
cemA · PV802396.1 · 60,149–60,838 bp · +
petA · PV802396.1 · 61,062–62,024 bp · +
petL · PV802396.1 · 64,728–64,823 bp · +
petG · PV802396.1 · 64,998–65,111 bp · +
psaJ · PV802396.1 · 65,812–65,946 bp · +
rpl33 · PV802396.1 · 66,406–66,606 bp · +
rps18 · PV802396.1 · 66,753–67,058 bp · +
rps12 · PV802396.1 · 137,217–138,009 bp · +
psbB · PV802396.1 · 70,971–72,497 bp · +
psbT · PV802396.1 · 72,635–72,736 bp · +
psbH · PV802396.1 · 73,037–73,258 bp · +
petB · PV802396.1 · 73,383–74,757 bp · +
petD · PV802396.1 · 74,952–76,162 bp · +
ycf15 · PV802396.1 · 91,584–91,781 bp · +
trnV-GAC · PV802396.1 · 98,051–98,122 bp · +
rrn16S · PV802396.1 · 98,350–99,840 bp · +
trnI · PV802396.1 · 100,130–101,137 bp · +
trnA-UGC · PV802396.1 · 101,202–102,080 bp · +
rrn23S · PV802396.1 · 102,280–105,089 bp · +
rrn4.5S · PV802396.1 · 105,188–105,290 bp · +
rrn5S · PV802396.1 · 105,546–105,666 bp · +
trnR-ACG · PV802396.1 · 105,901–105,974 bp · +
rpl32 · PV802396.1 · 110,748–110,924 bp · +
trnL-UAG · PV802396.1 · 111,640–111,719 bp · +
ccsA · PV802396.1 · 111,805–112,776 bp · +
trnN-GUU · PV802396.1 · 127,046–127,117 bp · +
rps7 · PV802396.1 · 138,063–138,530 bp · +
ndhB · PV802396.1 · 138,805–141,016 bp · +
trnL-CAA · PV802396.1 · 141,555–141,635 bp · +
trnM-CAU · PV802396.1 · 149,136–149,209 bp · +
rpl23 · PV802396.1 · 149,375–149,656 bp · +
rpl2 · PV802396.1 · 149,675–151,166 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Leucas ciliata
ANNOTATED PLASTOME
PV802396.1
151,259 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37815 75630 113444 151259 bp
Forward strand 5′ → 3′
psbK psbI trnS-CGA trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf15 trnV-GAC rrn16S trnI trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnI-AAU atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI rrn16S trnV-GAC ycf15
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 2 75 74 Locate
psbA gene − 294 1352 1059 Locate
trnK-UUU gene − 1583 4167 2585 Locate
matK gene − 1883 3418 1536 Locate
rps16 gene − 5072 6214 1143 Locate
trnQ-UUG gene − 7167 7238 72 Locate
psbK gene + 7575 7760 186 Locate
psbI gene + 8148 8258 111 Locate
trnS-GCU gene − 8380 8467 88 Locate
trnS-CGA gene + 9155 9903 749 Locate
trnR-UCU gene + 10077 10148 72 Locate
atpA gene − 10245 11768 1524 Locate
atpF gene − 11875 13092 1218 Locate
atpH gene − 13459 13704 246 Locate
atpI gene − 14694 15437 744 Locate
rps2 gene − 15662 16372 711 Locate
rpoC2 gene − 16593 20786 4194 Locate
rpoC1 gene − 20941 23768 2828 Locate
rpoB gene − 23795 27007 3213 Locate
trnC-GCA gene + 27900 27970 71 Locate
petN gene + 28799 28888 90 Locate
psbM gene − 29691 29795 105 Locate
trnD-GUC gene − 30325 30398 74 Locate
trnY-GUA gene − 30512 30595 84 Locate
trnE-UUC gene − 30655 30727 73 Locate
trnT-GGU gene + 31149 31220 72 Locate
psbD gene + 32352 33413 1062 Locate
psbC gene + 33361 34782 1422 Locate
trnS-UGA gene − 35014 35106 93 Locate
psbZ gene + 35433 35621 189 Locate
trnG-GCC gene + 35849 35919 71 Locate
trnM-CAU gene − 36079 36152 74 Locate
rps14 gene − 36302 36604 303 Locate
psaB gene − 36732 38936 2205 Locate
psaA gene − 38962 41214 2253 Locate
ycf3 gene − 41896 43821 1926 Locate
trnS-GGA gene + 44136 44222 87 Locate
rps4 gene − 44505 45110 606 Locate
trnT-UGU gene − 45504 45576 73 Locate
trnL-UAA gene + 46231 46808 578 Locate
trnF-GAA gene + 47099 47171 73 Locate
ndhJ gene − 47835 48311 477 Locate
ndhK gene − 48406 49083 678 Locate
ndhC gene − 49136 49498 363 Locate
trnI-AAU gene − 50465 51110 646 Locate
trnM-CAU gene + 51299 51371 73 Locate
atpE gene − 51575 51976 402 Locate
atpB gene − 51973 53469 1497 Locate
rbcL gene + 54265 55710 1446 Locate
accD gene + 56409 57881 1473 Locate
psaI gene + 58478 58588 111 Locate
ycf4 gene + 59027 59581 555 Locate
cemA gene + 60149 60838 690 Locate
petA gene + 61062 62024 963 Locate
psbJ gene − 63015 63137 123 Locate
psbL gene − 63275 63391 117 Locate
psbF gene − 63415 63534 120 Locate
psbE gene − 63549 63800 252 Locate
petL gene + 64728 64823 96 Locate
petG gene + 64998 65111 114 Locate
trnW-CCA gene − 65237 65310 74 Locate
trnP-UGG gene − 65474 65547 74 Locate
psaJ gene + 65812 65946 135 Locate
rpl33 gene + 66406 66606 201 Locate
rps18 gene + 66753 67058 306 Locate
rpl20 gene − 67272 67658 387 Locate
rps12 gene − 68397 68510 114 Locate
clpP gene − 68643 70533 1891 Locate
psbB gene + 70971 72497 1527 Locate
psbT gene + 72635 72736 102 Locate
psbN gene − 72802 72933 132 Locate
psbH gene + 73037 73258 222 Locate
petB gene + 73383 74757 1375 Locate
petD gene + 74952 76162 1211 Locate
rpoA gene − 76325 77344 1020 Locate
rps11 gene − 77416 77832 417 Locate
rpl36 gene − 77935 78048 114 Locate
infA gene − 78144 78377 234 Locate
rps8 gene − 78501 78914 414 Locate
rpl14 gene − 79082 79450 369 Locate
rpl16 gene − 79577 80872 1296 Locate
rps3 gene − 81020 81682 663 Locate
rpl22 gene − 81667 82116 450 Locate
rps19 gene − 82176 82454 279 Locate
rpl2 gene − 82506 83997 1492 Locate
rpl23 gene − 84016 84297 282 Locate
trnM-CAU gene − 84463 84536 74 Locate
ycf15 gene + 91584 91781 198 Locate
trnL-CAA gene − 92037 92117 81 Locate
ndhB gene − 92656 94867 2212 Locate
rps7 gene − 95142 95609 468 Locate
rps12 gene − 95663 96455 793 Locate
trnV-GAC gene + 98051 98122 72 Locate
rrn16S gene + 98350 99840 1491 Locate
trnI gene + 100130 101137 1008 Locate
trnA-UGC gene + 101202 102080 879 Locate
rrn23S gene + 102280 105089 2810 Locate
rrn4.5S gene + 105188 105290 103 Locate
rrn5S gene + 105546 105666 121 Locate
trnR-ACG gene + 105901 105974 74 Locate
trnN-GUU gene − 106555 106626 72 Locate
ndhF gene − 108016 110238 2223 Locate
rpl32 gene + 110748 110924 177 Locate
trnL-UAG gene + 111640 111719 80 Locate
ccsA gene + 111805 112776 972 Locate
ndhD gene − 112952 114487 1536 Locate
psaC gene − 114582 114827 246 Locate
ndhE gene − 115089 115394 306 Locate
ndhG gene − 115625 116155 531 Locate
ndhI gene − 116532 117038 507 Locate
ndhA gene − 117125 119253 2129 Locate
ndhH gene − 119255 120436 1182 Locate
rps15 gene − 120537 120809 273 Locate
ycf1 gene − 121183 126720 5538 Locate
trnN-GUU gene + 127046 127117 72 Locate
trnR-ACG gene − 127698 127771 74 Locate
rrn5S gene − 128006 128126 121 Locate
rrn4.5S gene − 128382 128484 103 Locate
rrn23S gene − 128583 131392 2810 Locate
trnA-UGC gene − 131592 132470 879 Locate
trnI gene − 132535 133542 1008 Locate
rrn16S gene − 133832 135322 1491 Locate
trnV-GAC gene − 135550 135621 72 Locate
rps12 gene + 137217 138009 793 Locate
rps7 gene + 138063 138530 468 Locate
ndhB gene + 138805 141016 2212 Locate
trnL-CAA gene + 141555 141635 81 Locate
ycf15 gene − 141891 142088 198 Locate
trnM-CAU gene + 149136 149209 74 Locate
rpl23 gene + 149375 149656 282 Locate
rpl2 gene + 149675 151166 1492 Locate
Status Available
Accession PV802396.1
Length 151,259 bp
GC content 38.6%
Annotated genes 130
Gene sequence records 8
Translation Rna 37 Photosystem Ii 15 Other 12 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources