Coordinate-aware organelle record

Lycopus lucidus chloroplast genome

Available PV558881.1 152,112 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	16	90	74
psbA	gene	photosystem-ii	−	421	1480	1059
trnK-UUU	gene	translation-rna	−	1710	4302	2592
matK	gene	other	−	2036	3566	1530
rps16	gene	ribosomal-protein	−	4856	5970	1114
trnQ-UUG	gene	translation-rna	−	6982	7054	72
psbK	gene	photosystem-ii	+	7449	7635	186
psbI	gene	photosystem-ii	+	8026	8137	111
trnS-GCU	gene	translation-rna	−	8320	8408	88
trnT-CGU	gene	translation-rna	+	9107	9870	763
trnR-UCU	gene	translation-rna	+	10056	10128	72
atpA	gene	atp-synthase	−	10235	11759	1524
atpF	gene	atp-synthase	−	11854	13107	1253
atpH	gene	atp-synthase	−	13380	13626	246
atpI	gene	atp-synthase	−	14276	15020	744
rps2	gene	ribosomal-protein	−	15255	15966	711
rpoC2	gene	rna-polymerase	−	16182	20370	4188
rpoC1	gene	rna-polymerase	−	20528	23319	2791
rpoB	gene	rna-polymerase	−	23345	26558	3213
trnC-GCA	gene	translation-rna	+	27735	27806	71
petN	gene	cytochrome	+	27963	28059	96
psbM	gene	photosystem-ii	−	29108	29213	105
trnD-GUC	gene	translation-rna	−	29736	29810	74
trnY-GUA	gene	translation-rna	−	29920	30004	84
trnE-UUC	gene	translation-rna	−	30085	30158	73
trnT-GGU	gene	translation-rna	+	30718	30790	72
psbD	gene	photosystem-ii	+	32196	33258	1062
psbC	gene	photosystem-ii	+	33205	34627	1422
trnS-UGA	gene	translation-rna	−	34873	34966	93
psbZ	gene	photosystem-ii	+	35300	35489	189
trnG-GCC	gene	translation-rna	+	35767	35838	71
trnM-CAU	gene	translation-rna	−	35998	36072	74
rps14	gene	ribosomal-protein	−	36221	36524	303
psaB	gene	photosystem-i	−	36646	38851	2205
psaA	gene	photosystem-i	−	38876	41129	2253
ycf3	gene	other	−	41961	43908	1947
trnS-GGA	gene	translation-rna	+	44531	44618	87
rps4	gene	ribosomal-protein	−	44898	45504	606
trnT-UGU	gene	translation-rna	−	45872	45945	73
trnL-UAA	gene	translation-rna	+	46636	47205	569
trnF-GAA	gene	translation-rna	+	47494	47567	73
ndhJ	gene	nad-dehydrogenase	−	48240	48717	477
ndhK	gene	nad-dehydrogenase	−	48827	49505	678
ndhC	gene	nad-dehydrogenase	−	49556	49919	363
trnV-UAC	gene	translation-rna	−	50876	51524	648
trnM-CAU	gene	translation-rna	+	51704	51777	73
atpE	gene	atp-synthase	−	51987	52389	402
atpB	gene	atp-synthase	−	52385	53882	1497
rbcL	gene	other	+	54676	56110	1434
accD	gene	other	+	56814	58296	1482
psaI	gene	photosystem-i	+	58761	58872	111
ycf4	gene	other	+	59322	59877	555
cemA	gene	other	+	60555	61245	690
petA	gene	cytochrome	+	61458	62421	963
psbJ	gene	photosystem-ii	−	63462	63585	123
psbL	gene	photosystem-ii	−	63719	63836	117
psbF	gene	photosystem-ii	−	63859	63979	120
psbE	gene	photosystem-ii	−	63993	64245	252
petL	gene	cytochrome	+	65151	65247	96
petG	gene	cytochrome	+	65423	65537	114
trnW-CCA	gene	translation-rna	−	65651	65725	74
trnP-UGG	gene	translation-rna	−	65898	65972	74
psaJ	gene	photosystem-i	+	66252	66387	135
rpl33	gene	ribosomal-protein	+	66842	67043	201
rps18	gene	ribosomal-protein	+	67224	67530	306
rpl20	gene	ribosomal-protein	−	67763	68150	387
rps12	gene	ribosomal-protein	−	68967	97174	28207
rps12	gene	ribosomal-protein	+	68967	138826	69859
clpP	gene	other	−	69204	71116	1912
psbB	gene	photosystem-ii	+	71564	73091	1527
psbT	gene	photosystem-ii	+	73274	73376	102
psbN	gene	photosystem-ii	−	73449	73581	132
psbH	gene	photosystem-ii	+	73686	73908	222
petB	gene	cytochrome	+	74031	75404	1373
petD	gene	cytochrome	+	75591	76793	1202
rpoA	gene	rna-polymerase	−	76978	77986	1008
rps11	gene	ribosomal-protein	−	78056	78473	417
rpl36	gene	ribosomal-protein	−	78582	78696	114
infA	gene	other	−	78791	79025	234
rps8	gene	ribosomal-protein	−	79151	79556	405
rpl14	gene	ribosomal-protein	−	79746	80115	369
rpl16	gene	ribosomal-protein	−	80242	80653	411
rps3	gene	ribosomal-protein	−	81674	82337	663
rpl22	gene	ribosomal-protein	−	82321	82789	468
rps19	gene	ribosomal-protein	−	82858	83137	279
rpl2	gene	ribosomal-protein	−	83196	84686	1490
rpl23	gene	ribosomal-protein	−	84704	84986	282
trnI-CAU	gene	translation-rna	−	85151	85225	74
ycf2	gene	other	+	85313	92153	6840
ycf15	gene	other	+	92286	92484	198
trnL-CAA	gene	translation-rna	−	92744	92825	81
ndhB	gene	nad-dehydrogenase	−	93385	95593	2208
rps7	gene	ribosomal-protein	−	95859	96327	468
trnV-GAC	gene	translation-rna	+	98813	98885	72
rrn16S	gene	ribosomal-rna	+	99111	100602	1491
trnI-GAU	gene	translation-rna	+	100900	101919	1019
trnA-UGC	gene	translation-rna	+	101983	102862	879
rrn23S	gene	ribosomal-rna	+	103021	105832	2811
rrn4.5S	gene	ribosomal-rna	+	105930	106200	270
rrn5S	gene	ribosomal-rna	+	106293	106424	131
trnR-ACG	gene	translation-rna	+	106663	106737	74
trnN-GUU	gene	translation-rna	−	107261	107333	72
ycf1	gene	other	+	107551	108793	1242
ndhF	gene	nad-dehydrogenase	−	108686	110918	2232
rpl32	gene	ribosomal-protein	+	111392	111563	171
trnL-UAG	gene	translation-rna	+	112341	112421	80
ccsA	gene	other	+	112520	113498	978
ndhD	gene	nad-dehydrogenase	−	113746	115276	1530
psaC	gene	photosystem-i	−	115370	115616	246
ndhE	gene	nad-dehydrogenase	−	115864	116170	306
ndhG	gene	nad-dehydrogenase	−	116388	116919	531
ndhI	gene	nad-dehydrogenase	−	117295	117808	513
ndhA	gene	nad-dehydrogenase	−	117888	119986	2098
ndhH	gene	nad-dehydrogenase	−	119987	121169	1182
rps15	gene	ribosomal-protein	−	121268	121541	273
ycf1	gene	other	−	121991	127544	5553
trnN-GUU	gene	translation-rna	+	127873	127945	72
trnR-ACG	gene	translation-rna	−	128469	128543	74
rrn5S	gene	ribosomal-rna	−	128782	128913	131
rrn4.5S	gene	ribosomal-rna	−	129006	129276	270
rrn23S	gene	ribosomal-rna	−	129374	132185	2811
trnA-UGC	gene	translation-rna	−	132344	133223	879
trnI-GAU	gene	translation-rna	−	133287	134306	1019
rrn16S	gene	ribosomal-rna	−	134604	136095	1491
trnV-GAC	gene	translation-rna	−	136321	136393	72
rps7	gene	ribosomal-protein	+	138879	139347	468
ndhB	gene	nad-dehydrogenase	+	139613	141821	2208
trnL-CAA	gene	translation-rna	+	142381	142462	81
ycf15	gene	other	−	142722	142920	198
ycf2	gene	other	−	143053	149893	6840
trnI-CAU	gene	translation-rna	+	149981	150055	74
rpl23	gene	ribosomal-protein	+	150220	150502	282
rpl2	gene	ribosomal-protein	+	150520	152010	1490

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePV558881.1DNA · accDPV558881DNA · atpBPV558881DNA · matKPV558881DNA · ndhFPV558881DNA · psbAPV558881DNA · rbcLPV558881DNA · rps12PV558881DNA · ycf1PV558881