Coordinate-aware organelle record

Mentha x verticillata chloroplast genome

Available NC_063687.1 152,026 bp 133 coordinate-linked features
IRIR0 kb13 kb26 kb39 kb52 kb65 kb78 kb91 kb104 kb117 kb130 kb143 kbtrnH-GUG · gene · 11-84 bp · − strandpsbA · gene · 400-1,458 bp · − strandtrnK-UUU · gene · 1,678-4,274 bp · − strandmatK · gene · 2,007-3,536 bp · − strandrps16 · gene · 4,802-5,943 bp · − strandtrnQ-UUG · gene · 6,906-6,977 bp · − strandpsbK · gene · 7,358-7,543 bp · + strandpsbI · gene · 7,937-8,047 bp · + strandtrnS-GCU · gene · 8,189-8,276 bp · − strandtrnT-CGU · gene · 8,954-9,713 bp · + strandtrnR-UCU · gene · 9,916-9,987 bp · + strandatpA · gene · 10,096-11,619 bp · − strandatpF · gene · 11,713-12,958 bp · − strandatpH · gene · 13,224-13,469 bp · − strandatpI · gene · 14,472-15,215 bp · − strandrps2 · gene · 15,438-16,148 bp · − strandrpoC2 · gene · 16,369-20,568 bp · − strandrpoC1 · gene · 20,729-23,540 bp · − strandrpoB · gene · 23,567-26,779 bp · − strandtrnC-GCA · gene · 27,920-27,990 bp · + strandpetN · gene · 28,151-28,240 bp · + strandpsbM · gene · 29,205-29,309 bp · − strandtrnD-GUC · gene · 29,833-29,906 bp · − strandtrnY-GUA · gene · 30,017-30,100 bp · − strandtrnE-UUC · gene · 30,182-30,254 bp · − strandtrnT-GGU · gene · 30,825-30,896 bp · + strandpsbD · gene · 32,252-33,313 bp · + strandpsbC · gene · 33,261-34,682 bp · + strandtrnS-UGA · gene · 34,928-35,020 bp · − strandpsbZ · gene · 35,371-35,559 bp · + strandtrnG-GCC · gene · 35,831-35,901 bp · + strandtrnM-CAU · gene · 36,063-36,136 bp · − strandrps14 · gene · 36,286-36,588 bp · − strandpsaB · gene · 36,716-38,920 bp · − strandpsaA · gene · 38,946-41,198 bp · − strandycf3 · gene · 41,962-43,907 bp · − strandtrnS-GGA · gene · 44,752-44,838 bp · + strandrps4 · gene · 45,126-45,731 bp · − strandtrnT-UGU · gene · 46,144-46,216 bp · − strandtrnL-UAA · gene · 46,865-47,446 bp · + strandtrnF-GAA · gene · 47,734-47,806 bp · + strandndhJ · gene · 48,460-48,936 bp · − strandndhK · gene · 49,047-49,724 bp · − strandndhC · gene · 49,776-50,138 bp · − strandtrnV-UAC · gene · 51,087-51,728 bp · − strandtrnM-CAU · gene · 51,909-51,981 bp · + strandatpE · gene · 52,192-52,593 bp · − strandatpB · gene · 52,590-54,080 bp · − strandrbcL · gene · 54,866-56,299 bp · + strandaccD · gene · 56,995-58,476 bp · + strandpsaI · gene · 58,947-59,057 bp · + strandycf4 · gene · 59,505-60,059 bp · + strandcemA · gene · 60,712-61,401 bp · + strandpetA · gene · 61,616-62,578 bp · + strandpsbJ · gene · 63,599-63,721 bp · − strandpsbL · gene · 63,856-63,972 bp · − strandpsbF · gene · 63,996-64,115 bp · − strandpsbE · gene · 64,130-64,381 bp · − strandpetL · gene · 65,259-65,354 bp · + strandpetG · gene · 65,524-65,637 bp · + strandtrnW-CCA · gene · 65,757-65,830 bp · − strandtrnP-UGG · gene · 66,004-66,077 bp · − strandpsaJ · gene · 66,354-66,488 bp · + strandrpl33 · gene · 66,943-67,146 bp · + strandrps18 · gene · 67,317-67,622 bp · + strandrpl20 · gene · 67,856-68,242 bp · − strandrps12 · gene · 69,041-97,197 bp · − strandrps12 · gene · 69,041-138,781 bp · + strandclpP · gene · 69,281-71,204 bp · − strandpsbB · gene · 71,656-73,182 bp · + strandpsbT · gene · 73,372-73,473 bp · + strandpsbN · gene · 73,542-73,673 bp · − strandpsbH · gene · 73,779-74,000 bp · + strandpetB · gene · 74,126-75,501 bp · + strandpetD · gene · 75,689-76,875 bp · + strandrpoA · gene · 77,058-78,065 bp · − strandrps11 · gene · 78,137-78,553 bp · − strandrpl36 · gene · 78,663-78,776 bp · − strandinfA · gene · 78,872-79,105 bp · − strandrps8 · gene · 79,230-79,634 bp · − strandrpl14 · gene · 79,818-80,186 bp · − strandrpl16 · gene · 80,318-81,601 bp · − strandrps3 · gene · 81,746-82,408 bp · − strandrpl22 · gene · 82,393-82,860 bp · − strandrps19 · gene · 82,930-83,208 bp · − strandrpl2 · gene · 83,270-84,759 bp · − strandrpl23 · gene · 84,778-85,059 bp · − strandtrnI-CAU · gene · 85,225-85,298 bp · − strandycf2 · gene · 85,387-92,181 bp · + strandycf15 · gene · 92,323-92,520 bp · + strandtrnL-CAA · gene · 92,776-92,856 bp · − strandndhB · gene · 93,417-95,624 bp · − strandrps7 · gene · 95,890-96,357 bp · − strandtrnV-GAC · gene · 98,840-98,911 bp · + strandrrn16S · gene · 99,138-100,628 bp · + strandtrnI-GAU · gene · 100,927-101,944 bp · + strandtrnA-UGC · gene · 102,014-102,891 bp · + strandrrn23S · gene · 103,064-105,874 bp · + strandrrn4.5S · gene · 105,973-106,242 bp · + strandrrn5S · gene · 106,335-106,456 bp · + strandtrnR-ACG · gene · 106,700-106,773 bp · + strandtrnN-GUU · gene · 107,299-107,370 bp · − strandycf1 · gene · 107,700-108,768 bp · + strandndhF · gene · 108,724-110,955 bp · − strandrpl32 · gene · 111,430-111,600 bp · + strandtrnL-UAG · gene · 112,349-112,428 bp · + strandccsA · gene · 112,530-113,507 bp · + strandndhD · gene · 113,745-115,274 bp · − strandpsaC · gene · 115,366-115,611 bp · − strandndhE · gene · 115,870-116,175 bp · − strandndhG · gene · 116,400-116,930 bp · − strandndhI · gene · 117,314-117,820 bp · − strandndhA · gene · 117,896-119,988 bp · − strandndhH · gene · 119,990-121,171 bp · − strandrps15 · gene · 121,266-121,538 bp · − strandycf1 · gene · 121,943-127,492 bp · − strandtrnN-GUU · gene · 127,822-127,893 bp · + strandtrnR-ACG · gene · 128,419-128,492 bp · − strandrrn5S · gene · 128,736-128,857 bp · − strandrrn4.5S · gene · 128,950-129,219 bp · − strandrrn23S · gene · 129,318-132,128 bp · − strandtrnA-UGC · gene · 132,301-133,178 bp · − strandtrnI-GAU · gene · 133,248-134,265 bp · − strandrrn16S · gene · 134,564-136,054 bp · − strandtrnV-GAC · gene · 136,281-136,352 bp · − strandrps7 · gene · 138,835-139,302 bp · + strandndhB · gene · 139,568-141,775 bp · + strandtrnL-CAA · gene · 142,336-142,416 bp · + strandycf15 · gene · 142,672-142,869 bp · − strandycf2 · gene · 143,011-149,805 bp · − strandtrnI-CAU · gene · 149,894-149,967 bp · + strandrpl23 · gene · 150,133-150,414 bp · + strandrpl2 · gene · 150,433-151,922 bp · + strandMentha x verticillataANNOTATED PLASTOMENC_063687.1152,026 bp · 133 genesOuter ring: forward strand · inner ring: reverse strand · click a gene to open its pageGene functionTranslation RnaPhotosystem IiOtherRibosomal ProteinAtp SynthaseRna PolymeraseCytochromePhotosystem INad DehydrogenaseRibosomal RnaVerified annotationSource: NCBI GenBankAccession: NC_063687.1Features: 133 coordinate-linked genesHover for coordinates · click for gene page

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features
GeneTypeGroupStrandStartEndLength
trnH-GUGgenetranslation-rna−108474
psbAgenephotosystem-ii−39914581059
trnK-UUUgenetranslation-rna−167742742597
matKgeneother−200635361530
rps16generibosomal-protein−480159431142
trnQ-UUGgenetranslation-rna−6905697772
psbKgenephotosystem-ii+73577543186
psbIgenephotosystem-ii+79368047111
trnS-GCUgenetranslation-rna−8188827688
trnT-CGUgenetranslation-rna+89539713760
trnR-UCUgenetranslation-rna+9915998772
atpAgeneatp-synthase−10095116191524
atpFgeneatp-synthase−11712129581246
atpHgeneatp-synthase−1322313469246
atpIgeneatp-synthase−1447115215744
rps2generibosomal-protein−1543716148711
rpoC2generna-polymerase−16368205684200
rpoC1generna-polymerase−20728235402812
rpoBgenerna-polymerase−23566267793213
trnC-GCAgenetranslation-rna+279192799071
petNgenecytochrome+281502824090
psbMgenephotosystem-ii−2920429309105
trnD-GUCgenetranslation-rna−298322990674
trnY-GUAgenetranslation-rna−300163010084
trnE-UUCgenetranslation-rna−301813025473
trnT-GGUgenetranslation-rna+308243089672
psbDgenephotosystem-ii+32251333131062
psbCgenephotosystem-ii+33260346821422
trnS-UGAgenetranslation-rna−349273502093
psbZgenephotosystem-ii+3537035559189
trnG-GCCgenetranslation-rna+358303590171
trnM-CAUgenetranslation-rna−360623613674
rps14generibosomal-protein−3628536588303
psaBgenephotosystem-i−36715389202205
psaAgenephotosystem-i−38945411982253
ycf3geneother−41961439071946
trnS-GGAgenetranslation-rna+447514483887
rps4generibosomal-protein−4512545731606
trnT-UGUgenetranslation-rna−461434621673
trnL-UAAgenetranslation-rna+4686447446582
trnF-GAAgenetranslation-rna+477334780673
ndhJgenenad-dehydrogenase−4845948936477
ndhKgenenad-dehydrogenase−4904649724678
ndhCgenenad-dehydrogenase−4977550138363
trnV-UACgenetranslation-rna−5108651728642
trnM-CAUgenetranslation-rna+519085198173
atpEgeneatp-synthase−5219152593402
atpBgeneatp-synthase−52589540801491
rbcLgeneother+54865562991434
accDgeneother+56994584761482
psaIgenephotosystem-i+5894659057111
ycf4geneother+5950460059555
cemAgeneother+6071161401690
petAgenecytochrome+6161562578963
psbJgenephotosystem-ii−6359863721123
psbLgenephotosystem-ii−6385563972117
psbFgenephotosystem-ii−6399564115120
psbEgenephotosystem-ii−6412964381252
petLgenecytochrome+652586535496
petGgenecytochrome+6552365637114
trnW-CCAgenetranslation-rna−657566583074
trnP-UGGgenetranslation-rna−660036607774
psaJgenephotosystem-i+6635366488135
rpl33generibosomal-protein+6694267146204
rps18generibosomal-protein+6731667622306
rpl20generibosomal-protein−6785568242387
rps12generibosomal-protein−690409719728157
rps12generibosomal-protein+6904013878169741
clpPgeneother−69280712041924
psbBgenephotosystem-ii+71655731821527
psbTgenephotosystem-ii+7337173473102
psbNgenephotosystem-ii−7354173673132
psbHgenephotosystem-ii+7377874000222
petBgenecytochrome+74125755011376
petDgenecytochrome+75688768751187
rpoAgenerna-polymerase−77057780651008
rps11generibosomal-protein−7813678553417
rpl36generibosomal-protein−7866278776114
infAgeneother−7887179105234
rps8generibosomal-protein−7922979634405
rpl14generibosomal-protein−7981780186369
rpl16generibosomal-protein−80317816011284
rps3generibosomal-protein−8174582408663
rpl22generibosomal-protein−8239282860468
rps19generibosomal-protein−8292983208279
rpl2generibosomal-protein−83269847591490
rpl23generibosomal-protein−8477785059282
trnI-CAUgenetranslation-rna−852248529874
ycf2geneother+85386921816795
ycf15geneother+9232292520198
trnL-CAAgenetranslation-rna−927759285681
ndhBgenenad-dehydrogenase−93416956242208
rps7generibosomal-protein−9588996357468
trnV-GACgenetranslation-rna+988399891172
rrn16Sgeneribosomal-rna+991371006281491
trnI-GAUgenetranslation-rna+1009261019441018
trnA-UGCgenetranslation-rna+102013102891878
rrn23Sgeneribosomal-rna+1030631058742811
rrn4.5Sgeneribosomal-rna+105972106242270
rrn5Sgeneribosomal-rna+106334106456122
trnR-ACGgenetranslation-rna+10669910677374
trnN-GUUgenetranslation-rna−10729810737072
ycf1geneother+1076991087681069
ndhFgenenad-dehydrogenase−1087231109552232
rpl32generibosomal-protein+111429111600171
trnL-UAGgenetranslation-rna+11234811242880
ccsAgeneother+112529113507978
ndhDgenenad-dehydrogenase−1137441152741530
psaCgenephotosystem-i−115365115611246
ndhEgenenad-dehydrogenase−115869116175306
ndhGgenenad-dehydrogenase−116399116930531
ndhIgenenad-dehydrogenase−117313117820507
ndhAgenenad-dehydrogenase−1178951199882093
ndhHgenenad-dehydrogenase−1199891211711182
rps15generibosomal-protein−121265121538273
ycf1geneother−1219421274925550
trnN-GUUgenetranslation-rna+12782112789372
trnR-ACGgenetranslation-rna−12841812849274
rrn5Sgeneribosomal-rna−128735128857122
rrn4.5Sgeneribosomal-rna−128949129219270
rrn23Sgeneribosomal-rna−1293171321282811
trnA-UGCgenetranslation-rna−132300133178878
trnI-GAUgenetranslation-rna−1332471342651018
rrn16Sgeneribosomal-rna−1345631360541491
trnV-GACgenetranslation-rna−13628013635272
rps7generibosomal-protein+138834139302468
ndhBgenenad-dehydrogenase+1395671417752208
trnL-CAAgenetranslation-rna+14233514241681
ycf15geneother−142671142869198
ycf2geneother−1430101498056795
trnI-CAUgenetranslation-rna+14989314996774
rpl23generibosomal-protein+150132150414282
rpl2generibosomal-protein+1504321519221490

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources