Nepeta bracteata chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_079688.1 · 9–82 bp · −
psbA · NC_079688.1 · 340–1,398 bp · −
trnK-UUU · NC_079688.1 · 1,629–4,204 bp · −
matK · NC_079688.1 · 1,922–3,469 bp · −
rps16 · NC_079688.1 · 4,710–5,848 bp · −
trnQ-UUG · NC_079688.1 · 6,854–6,925 bp · −
trnS-GCU · NC_079688.1 · 8,170–8,257 bp · −
atpA · NC_079688.1 · 10,107–11,630 bp · −
atpF · NC_079688.1 · 11,726–12,982 bp · −
atpH · NC_079688.1 · 13,248–13,493 bp · −
atpI · NC_079688.1 · 14,504–15,247 bp · −
rps2 · NC_079688.1 · 15,474–16,184 bp · −
rpoC2 · NC_079688.1 · 16,391–20,569 bp · −
rpoC1 · NC_079688.1 · 20,731–23,557 bp · −
rpoB · NC_079688.1 · 23,584–26,796 bp · −
psbM · NC_079688.1 · 28,778–28,882 bp · −
trnD-GUC · NC_079688.1 · 29,404–29,477 bp · −
trnY-GUA · NC_079688.1 · 29,594–29,677 bp · −
trnE-UUC · NC_079688.1 · 29,755–29,827 bp · −
trnS-UGA · NC_079688.1 · 34,519–34,611 bp · −
trnM-CAU · NC_079688.1 · 35,690–35,763 bp · −
rps14 · NC_079688.1 · 35,913–36,215 bp · −
psaB · NC_079688.1 · 36,338–38,542 bp · −
psaA · NC_079688.1 · 38,568–40,820 bp · −
ycf3 · NC_079688.1 · 41,641–43,568 bp · −
rps4 · NC_079688.1 · 44,791–45,396 bp · −
trnT-UGU · NC_079688.1 · 45,783–45,855 bp · −
ndhJ · NC_079688.1 · 48,111–48,587 bp · −
ndhK · NC_079688.1 · 48,698–49,375 bp · −
ndhC · NC_079688.1 · 49,427–49,789 bp · −
atpE · NC_079688.1 · 51,856–52,257 bp · −
atpB · NC_079688.1 · 52,254–53,750 bp · −
psbJ · NC_079688.1 · 63,292–63,414 bp · −
psbL · NC_079688.1 · 63,539–63,655 bp · −
psbF · NC_079688.1 · 63,679–63,798 bp · −
psbE · NC_079688.1 · 63,813–64,064 bp · −
trnW-CCA · NC_079688.1 · 65,470–65,543 bp · −
trnP-UGG · NC_079688.1 · 65,719–65,792 bp · −
rpl20 · NC_079688.1 · 67,570–67,956 bp · −
rps12 · NC_079688.1 · 68,731–68,844 bp · −
rps12 · NC_079688.1 · 96,097–96,890 bp · −
clpP · NC_079688.1 · 68,975–70,870 bp · −
psbN · NC_079688.1 · 73,174–73,305 bp · −
rpoA · NC_079688.1 · 76,688–77,695 bp · −
rps11 · NC_079688.1 · 77,767–78,183 bp · −
rpl36 · NC_079688.1 · 78,293–78,406 bp · −
infA · NC_079688.1 · 78,502–78,735 bp · −
rps8 · NC_079688.1 · 78,862–79,266 bp · −
rpl14 · NC_079688.1 · 79,456–79,824 bp · −
rpl16 · NC_079688.1 · 79,966–81,251 bp · −
rps3 · NC_079688.1 · 81,402–82,064 bp · −
rpl22 · NC_079688.1 · 82,049–82,516 bp · −
rps19 · NC_079688.1 · 82,586–82,864 bp · −
rpl2 · NC_079688.1 · 82,924–84,413 bp · −
rpl23 · NC_079688.1 · 84,432–84,713 bp · −
trnM-CAU · NC_079688.1 · 84,879–84,952 bp · −
trnL-CAA · NC_079688.1 · 92,463–92,543 bp · −
ndhB · NC_079688.1 · 93,097–95,310 bp · −
rps7 · NC_079688.1 · 95,576–96,043 bp · −
trnN-GUU · NC_079688.1 · 106,925–106,996 bp · −
ndhF · NC_079688.1 · 108,350–110,581 bp · −
ndhD · NC_079688.1 · 113,296–114,825 bp · −
psaC · NC_079688.1 · 114,926–115,171 bp · −
ndhE · NC_079688.1 · 115,431–115,736 bp · −
ndhG · NC_079688.1 · 115,963–116,493 bp · −
ndhI · NC_079688.1 · 116,849–117,355 bp · −
ndhA · NC_079688.1 · 117,436–119,552 bp · −
ndhH · NC_079688.1 · 119,554–120,741 bp · −
rps15 · NC_079688.1 · 120,841–121,113 bp · −
ycf1 · NC_079688.1 · 121,491–127,082 bp · −
trnR-ACG · NC_079688.1 · 128,005–128,078 bp · −
rrn5S · NC_079688.1 · 128,321–128,441 bp · −
rrn4.5S · NC_079688.1 · 128,671–128,773 bp · −
rrn23S · NC_079688.1 · 128,872–131,682 bp · −
trnA-UGC · NC_079688.1 · 131,842–132,719 bp · −
trnI · NC_079688.1 · 132,789–133,808 bp · −
rrn16S · NC_079688.1 · 134,107–135,597 bp · −
trnV-GAC · NC_079688.1 · 135,824–135,895 bp · −
ycf15 · NC_079688.1 · 142,207–142,404 bp · −
ycf2 · NC_079688.1 · 142,546–149,367 bp · −
psbK · NC_079688.1 · 7,322–7,507 bp · +
psbI · NC_079688.1 · 7,893–8,003 bp · +
trnR-UCU · NC_079688.1 · 9,935–10,006 bp · +
trnC-GCA · NC_079688.1 · 27,975–28,045 bp · +
petN · NC_079688.1 · 28,206–28,295 bp · +
trnT-GGU · NC_079688.1 · 30,394–30,465 bp · +
psbD · NC_079688.1 · 31,842–32,903 bp · +
psbC · NC_079688.1 · 32,851–34,272 bp · +
psbZ · NC_079688.1 · 34,956–35,144 bp · +
trnG-GCC · NC_079688.1 · 35,449–35,519 bp · +
trnS-GGA · NC_079688.1 · 44,430–44,516 bp · +
trnL-UAA · NC_079688.1 · 46,581–47,133 bp · +
trnF-GAA · NC_079688.1 · 47,435–47,507 bp · +
trnM-CAU · NC_079688.1 · 51,587–51,659 bp · +
rbcL · NC_079688.1 · 54,548–55,981 bp · +
accD · NC_079688.1 · 56,676–58,148 bp · +
psaI · NC_079688.1 · 58,611–58,721 bp · +
ycf4 · NC_079688.1 · 59,175–59,729 bp · +
cemA · NC_079688.1 · 60,388–61,077 bp · +
petA · NC_079688.1 · 61,292–62,254 bp · +
petL · NC_079688.1 · 64,968–65,063 bp · +
petG · NC_079688.1 · 65,241–65,354 bp · +
psaJ · NC_079688.1 · 66,070–66,204 bp · +
rpl33 · NC_079688.1 · 66,656–66,856 bp · +
rps18 · NC_079688.1 · 67,039–67,344 bp · +
rps12 · NC_079688.1 · 137,518–138,311 bp · +
psbB · NC_079688.1 · 71,300–72,826 bp · +
psbT · NC_079688.1 · 73,006–73,113 bp · +
psbH · NC_079688.1 · 73,411–73,632 bp · +
petB · NC_079688.1 · 73,754–75,106 bp · +
petD · NC_079688.1 · 75,294–76,505 bp · +
ycf2 · NC_079688.1 · 85,041–91,862 bp · +
ycf15 · NC_079688.1 · 92,004–92,201 bp · +
trnV-GAC · NC_079688.1 · 98,513–98,584 bp · +
rrn16S · NC_079688.1 · 98,811–100,301 bp · +
trnI · NC_079688.1 · 100,600–101,619 bp · +
trnA-UGC · NC_079688.1 · 101,689–102,566 bp · +
rrn23S · NC_079688.1 · 102,726–105,536 bp · +
rrn4.5S · NC_079688.1 · 105,635–105,737 bp · +
rrn5S · NC_079688.1 · 105,967–106,087 bp · +
trnR-ACG · NC_079688.1 · 106,330–106,403 bp · +
rpl32 · NC_079688.1 · 111,020–111,190 bp · +
trnL-UAG · NC_079688.1 · 111,892–111,971 bp · +
ccsA · NC_079688.1 · 112,065–113,042 bp · +
trnN-GUU · NC_079688.1 · 127,412–127,483 bp · +
rps7 · NC_079688.1 · 138,365–138,832 bp · +
ndhB · NC_079688.1 · 139,098–141,311 bp · +
trnL-CAA · NC_079688.1 · 141,865–141,945 bp · +
trnM-CAU · NC_079688.1 · 149,456–149,529 bp · +
rpl23 · NC_079688.1 · 149,695–149,976 bp · +
rpl2 · NC_079688.1 · 149,995–151,484 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Nepeta bracteata
ANNOTATED PLASTOME
NC_079688.1
151,588 bp · 130 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37897 75794 113691 151588 bp
Forward strand 5′ → 3′
psbK psbI trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnI trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
131 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 9 82 74 Locate
psbA gene − 340 1398 1059 Locate
trnK-UUU gene − 1629 4204 2576 Locate
matK gene − 1922 3469 1548 Locate
rps16 gene − 4710 5848 1139 Locate
trnQ-UUG gene − 6854 6925 72 Locate
psbK gene + 7322 7507 186 Locate
psbI gene + 7893 8003 111 Locate
trnS-GCU gene − 8170 8257 88 Locate
trnR-UCU gene + 9935 10006 72 Locate
atpA gene − 10107 11630 1524 Locate
atpF gene − 11726 12982 1257 Locate
atpH gene − 13248 13493 246 Locate
atpI gene − 14504 15247 744 Locate
rps2 gene − 15474 16184 711 Locate
rpoC2 gene − 16391 20569 4179 Locate
rpoC1 gene − 20731 23557 2827 Locate
rpoB gene − 23584 26796 3213 Locate
trnC-GCA gene + 27975 28045 71 Locate
petN gene + 28206 28295 90 Locate
psbM gene − 28778 28882 105 Locate
trnD-GUC gene − 29404 29477 74 Locate
trnY-GUA gene − 29594 29677 84 Locate
trnE-UUC gene − 29755 29827 73 Locate
trnT-GGU gene + 30394 30465 72 Locate
psbD gene + 31842 32903 1062 Locate
psbC gene + 32851 34272 1422 Locate
trnS-UGA gene − 34519 34611 93 Locate
psbZ gene + 34956 35144 189 Locate
trnG-GCC gene + 35449 35519 71 Locate
trnM-CAU gene − 35690 35763 74 Locate
rps14 gene − 35913 36215 303 Locate
psaB gene − 36338 38542 2205 Locate
psaA gene − 38568 40820 2253 Locate
ycf3 gene − 41641 43568 1928 Locate
trnS-GGA gene + 44430 44516 87 Locate
rps4 gene − 44791 45396 606 Locate
trnT-UGU gene − 45783 45855 73 Locate
trnL-UAA gene + 46581 47133 553 Locate
trnF-GAA gene + 47435 47507 73 Locate
ndhJ gene − 48111 48587 477 Locate
ndhK gene − 48698 49375 678 Locate
ndhC gene − 49427 49789 363 Locate
trnM-CAU gene + 51587 51659 73 Locate
atpE gene − 51856 52257 402 Locate
atpB gene − 52254 53750 1497 Locate
rbcL gene + 54548 55981 1434 Locate
accD gene + 56676 58148 1473 Locate
psaI gene + 58611 58721 111 Locate
ycf4 gene + 59175 59729 555 Locate
cemA gene + 60388 61077 690 Locate
petA gene + 61292 62254 963 Locate
psbJ gene − 63292 63414 123 Locate
psbL gene − 63539 63655 117 Locate
psbF gene − 63679 63798 120 Locate
psbE gene − 63813 64064 252 Locate
petL gene + 64968 65063 96 Locate
petG gene + 65241 65354 114 Locate
trnW-CCA gene − 65470 65543 74 Locate
trnP-UGG gene − 65719 65792 74 Locate
psaJ gene + 66070 66204 135 Locate
rpl33 gene + 66656 66856 201 Locate
rps18 gene + 67039 67344 306 Locate
rpl20 gene − 67570 67956 387 Locate
rps12 gene − 68731 68844 114 Locate
clpP gene − 68975 70870 1896 Locate
psbB gene + 71300 72826 1527 Locate
psbT gene + 73006 73113 108 Locate
psbN gene − 73174 73305 132 Locate
psbH gene + 73411 73632 222 Locate
petB gene + 73754 75106 1353 Locate
petD gene + 75294 76505 1212 Locate
rpoA gene − 76688 77695 1008 Locate
rps11 gene − 77767 78183 417 Locate
rpl36 gene − 78293 78406 114 Locate
infA gene − 78502 78735 234 Locate
rps8 gene − 78862 79266 405 Locate
rpl14 gene − 79456 79824 369 Locate
rpl16 gene − 79966 81251 1286 Locate
rps3 gene − 81402 82064 663 Locate
rpl22 gene − 82049 82516 468 Locate
rps19 gene − 82586 82864 279 Locate
rpl2 gene − 82924 84413 1490 Locate
rpl23 gene − 84432 84713 282 Locate
trnM-CAU gene − 84879 84952 74 Locate
ycf2 gene + 85041 91862 6822 Locate
ycf15 gene + 92004 92201 198 Locate
trnL-CAA gene − 92463 92543 81 Locate
ndhB gene − 93097 95310 2214 Locate
rps7 gene − 95576 96043 468 Locate
rps12 gene − 96097 96890 794 Locate
trnV-GAC gene + 98513 98584 72 Locate
rrn16S gene + 98811 100301 1491 Locate
trnI gene + 100600 101619 1020 Locate
trnA-UGC gene + 101689 102566 878 Locate
rrn23S gene + 102726 105536 2811 Locate
rrn4.5S gene + 105635 105737 103 Locate
rrn5S gene + 105967 106087 121 Locate
trnR-ACG gene + 106330 106403 74 Locate
trnN-GUU gene − 106925 106996 72 Locate
ndhF gene − 108350 110581 2232 Locate
rpl32 gene + 111020 111190 171 Locate
trnL-UAG gene + 111892 111971 80 Locate
ccsA gene + 112065 113042 978 Locate
ndhD gene − 113296 114825 1530 Locate
psaC gene − 114926 115171 246 Locate
ndhE gene − 115431 115736 306 Locate
ndhG gene − 115963 116493 531 Locate
ndhI gene − 116849 117355 507 Locate
ndhA gene − 117436 119552 2117 Locate
ndhH gene − 119554 120741 1188 Locate
rps15 gene − 120841 121113 273 Locate
ycf1 gene − 121491 127082 5592 Locate
trnN-GUU gene + 127412 127483 72 Locate
trnR-ACG gene − 128005 128078 74 Locate
rrn5S gene − 128321 128441 121 Locate
rrn4.5S gene − 128671 128773 103 Locate
rrn23S gene − 128872 131682 2811 Locate
trnA-UGC gene − 131842 132719 878 Locate
trnI gene − 132789 133808 1020 Locate
rrn16S gene − 134107 135597 1491 Locate
trnV-GAC gene − 135824 135895 72 Locate
rps12 gene + 137518 138311 794 Locate
rps7 gene + 138365 138832 468 Locate
ndhB gene + 139098 141311 2214 Locate
trnL-CAA gene + 141865 141945 81 Locate
ycf15 gene − 142207 142404 198 Locate
ycf2 gene − 142546 149367 6822 Locate
trnM-CAU gene + 149456 149529 74 Locate
rpl23 gene + 149695 149976 282 Locate
rpl2 gene + 149995 151484 1490 Locate
Status Available
Accession NC_079688.1
Length 151,588 bp
GC content 37.9%
Annotated genes 130
Gene sequence records 8
Translation Rna 35 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources