Nepeta nuda chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · PV930134.1 · 11–84 bp · −
psbA · PV930134.1 · 429–1,487 bp · −
trnK-UUU · PV930134.1 · 1,730–4,293 bp · −
matK · PV930134.1 · 2,010–3,557 bp · −
rps16 · PV930134.1 · 4,810–5,957 bp · −
trnQ-UUG · PV930134.1 · 6,961–7,032 bp · −
trnS-GCU · PV930134.1 · 8,271–8,358 bp · −
atpA · PV930134.1 · 10,190–11,713 bp · −
atpF · PV930134.1 · 11,811–13,060 bp · −
atpH · PV930134.1 · 13,326–13,571 bp · −
atpI · PV930134.1 · 14,615–15,358 bp · −
rps2 · PV930134.1 · 15,581–16,291 bp · −
rpoC2 · PV930134.1 · 16,495–20,688 bp · −
rpoC1 · PV930134.1 · 20,850–23,673 bp · −
rpoB · PV930134.1 · 23,700–26,912 bp · −
psbM · PV930134.1 · 29,327–29,431 bp · −
trnD-GUC · PV930134.1 · 29,945–30,018 bp · −
trnY-GUA · PV930134.1 · 30,129–30,212 bp · −
trnE-UUC · PV930134.1 · 30,290–30,362 bp · −
trnS-UGA · PV930134.1 · 35,033–35,125 bp · −
trnM-CAU · PV930134.1 · 36,193–36,266 bp · −
rps14 · PV930134.1 · 36,416–36,718 bp · −
psaB · PV930134.1 · 36,841–39,045 bp · −
psaA · PV930134.1 · 39,071–41,323 bp · −
ycf3 · PV930134.1 · 42,186–44,127 bp · −
rps4 · PV930134.1 · 45,340–45,945 bp · −
trnT-UGU · PV930134.1 · 46,330–46,402 bp · −
ndhJ · PV930134.1 · 48,664–49,140 bp · −
ndhK · PV930134.1 · 49,251–49,928 bp · −
ndhC · PV930134.1 · 49,980–50,342 bp · −
atpE · PV930134.1 · 52,411–52,812 bp · −
atpB · PV930134.1 · 52,809–54,305 bp · −
psbJ · PV930134.1 · 63,878–64,000 bp · −
psbL · PV930134.1 · 64,130–64,246 bp · −
psbF · PV930134.1 · 64,270–64,389 bp · −
psbE · PV930134.1 · 64,404–64,655 bp · −
trnW-CCA · PV930134.1 · 66,030–66,103 bp · −
trnP-UGG · PV930134.1 · 66,277–66,350 bp · −
rpl20 · PV930134.1 · 68,112–68,498 bp · −
rps12 · PV930134.1 · 69,301–69,414 bp · −
rps12 · PV930134.1 · 96,666–97,459 bp · −
clpP · PV930134.1 · 69,537–71,380 bp · −
psbN · PV930134.1 · 73,694–73,825 bp · −
rpoA · PV930134.1 · 77,253–78,260 bp · −
rps11 · PV930134.1 · 78,322–78,738 bp · −
rpl36 · PV930134.1 · 78,848–78,961 bp · −
infA · PV930134.1 · 79,057–79,290 bp · −
rps8 · PV930134.1 · 79,427–79,831 bp · −
rpl14 · PV930134.1 · 80,019–80,387 bp · −
rpl16 · PV930134.1 · 80,526–81,820 bp · −
rps3 · PV930134.1 · 81,961–82,623 bp · −
rpl22 · PV930134.1 · 82,608–83,075 bp · −
rps19 · PV930134.1 · 83,145–83,423 bp · −
rpl2 · PV930134.1 · 83,483–84,972 bp · −
rpl23 · PV930134.1 · 84,991–85,272 bp · −
trnM-CAU · PV930134.1 · 85,438–85,511 bp · −
trnL-CAA · PV930134.1 · 93,028–93,108 bp · −
ndhB · PV930134.1 · 93,672–95,879 bp · −
rps7 · PV930134.1 · 96,145–96,612 bp · −
trnN-GUU · PV930134.1 · 107,539–107,610 bp · −
ndhF · PV930134.1 · 108,964–111,195 bp · −
ndhD · PV930134.1 · 113,919–115,448 bp · −
psaC · PV930134.1 · 115,540–115,785 bp · −
ndhE · PV930134.1 · 116,034–116,339 bp · −
ndhG · PV930134.1 · 116,566–117,096 bp · −
ndhI · PV930134.1 · 117,467–117,973 bp · −
ndhA · PV930134.1 · 118,054–120,157 bp · −
ndhH · PV930134.1 · 120,159–121,346 bp · −
rps15 · PV930134.1 · 121,446–121,718 bp · −
ycf1 · PV930134.1 · 122,087–127,636 bp · −
trnR-ACG · PV930134.1 · 128,568–128,641 bp · −
rrn5S · PV930134.1 · 128,885–129,005 bp · −
rrn4.5S · PV930134.1 · 129,266–129,368 bp · −
rrn23S · PV930134.1 · 129,467–132,277 bp · −
trnA-UGC · PV930134.1 · 132,443–133,320 bp · −
trnE-UUC · PV930134.1 · 133,390–134,409 bp · −
rrn16S · PV930134.1 · 134,708–136,198 bp · −
trnV-GAC · PV930134.1 · 136,425–136,496 bp · −
ycf15 · PV930134.1 · 142,804–143,001 bp · −
ycf2 · PV930134.1 · 143,143–149,976 bp · −
psbK · PV930134.1 · 7,429–7,614 bp · +
psbI · PV930134.1 · 8,003–8,113 bp · +
trnT-CGU · PV930134.1 · 9,075–9,831 bp · +
trnR-UCU · PV930134.1 · 10,019–10,090 bp · +
trnC-GCA · PV930134.1 · 28,054–28,124 bp · +
petN · PV930134.1 · 28,285–28,374 bp · +
trnT-GGU · PV930134.1 · 30,929–31,000 bp · +
psbD · PV930134.1 · 32,361–33,422 bp · +
psbC · PV930134.1 · 33,370–34,791 bp · +
psbZ · PV930134.1 · 35,470–35,658 bp · +
trnG-GCC · PV930134.1 · 35,954–36,024 bp · +
trnS-GGA · PV930134.1 · 44,976–45,062 bp · +
trnL-UAA · PV930134.1 · 47,087–47,647 bp · +
trnF-GAA · PV930134.1 · 47,952–48,024 bp · +
trnM-CAU · PV930134.1 · 52,133–52,205 bp · +
rbcL · PV930134.1 · 55,105–56,538 bp · +
accD · PV930134.1 · 57,227–58,708 bp · +
psaI · PV930134.1 · 59,192–59,302 bp · +
ycf4 · PV930134.1 · 59,758–60,312 bp · +
cemA · PV930134.1 · 60,979–61,668 bp · +
petA · PV930134.1 · 61,878–62,840 bp · +
petL · PV930134.1 · 65,541–65,636 bp · +
petG · PV930134.1 · 65,807–65,920 bp · +
psaJ · PV930134.1 · 66,621–66,755 bp · +
rpl33 · PV930134.1 · 67,208–67,408 bp · +
rps18 · PV930134.1 · 67,592–67,897 bp · +
rps12 · PV930134.1 · 138,117–138,910 bp · +
psbB · PV930134.1 · 71,810–73,336 bp · +
psbT · PV930134.1 · 73,526–73,633 bp · +
psbH · PV930134.1 · 73,931–74,152 bp · +
petB · PV930134.1 · 74,274–75,668 bp · +
petD · PV930134.1 · 75,856–77,070 bp · +
ycf2 · PV930134.1 · 85,600–92,433 bp · +
ycf15 · PV930134.1 · 92,575–92,772 bp · +
trnV-GAC · PV930134.1 · 99,080–99,151 bp · +
rrn16S · PV930134.1 · 99,378–100,868 bp · +
trnE-UUC · PV930134.1 · 101,167–102,186 bp · +
trnA-UGC · PV930134.1 · 102,256–103,133 bp · +
rrn23S · PV930134.1 · 103,299–106,109 bp · +
rrn4.5S · PV930134.1 · 106,208–106,310 bp · +
rrn5S · PV930134.1 · 106,571–106,691 bp · +
trnR-ACG · PV930134.1 · 106,935–107,008 bp · +
rpl32 · PV930134.1 · 111,656–111,841 bp · +
trnL-UAG · PV930134.1 · 112,510–112,589 bp · +
ccsA · PV930134.1 · 112,684–113,661 bp · +
trnN-GUU · PV930134.1 · 127,966–128,037 bp · +
rps7 · PV930134.1 · 138,964–139,431 bp · +
ndhB · PV930134.1 · 139,697–141,904 bp · +
trnL-CAA · PV930134.1 · 142,468–142,548 bp · +
trnM-CAU · PV930134.1 · 150,065–150,138 bp · +
rpl23 · PV930134.1 · 150,304–150,585 bp · +
rpl2 · PV930134.1 · 150,604–152,093 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Nepeta nuda
ANNOTATED PLASTOME
PV930134.1
152,195 bp · 131 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38049 76098 114146 152195 bp
Forward strand 5′ → 3′
psbK psbI trnT-CGU trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16S trnE-UUC trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUG trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UGA trnM-CAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC atpE atpB psbJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rpl36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnE-UUC rrn16S trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 11 84 74 Locate
psbA gene − 429 1487 1059 Locate
trnK-UUU gene − 1730 4293 2564 Locate
matK gene − 2010 3557 1548 Locate
rps16 gene − 4810 5957 1148 Locate
trnQ-UUG gene − 6961 7032 72 Locate
psbK gene + 7429 7614 186 Locate
psbI gene + 8003 8113 111 Locate
trnS-GCU gene − 8271 8358 88 Locate
trnT-CGU gene + 9075 9831 757 Locate
trnR-UCU gene + 10019 10090 72 Locate
atpA gene − 10190 11713 1524 Locate
atpF gene − 11811 13060 1250 Locate
atpH gene − 13326 13571 246 Locate
atpI gene − 14615 15358 744 Locate
rps2 gene − 15581 16291 711 Locate
rpoC2 gene − 16495 20688 4194 Locate
rpoC1 gene − 20850 23673 2824 Locate
rpoB gene − 23700 26912 3213 Locate
trnC-GCA gene + 28054 28124 71 Locate
petN gene + 28285 28374 90 Locate
psbM gene − 29327 29431 105 Locate
trnD-GUC gene − 29945 30018 74 Locate
trnY-GUA gene − 30129 30212 84 Locate
trnE-UUC gene − 30290 30362 73 Locate
trnT-GGU gene + 30929 31000 72 Locate
psbD gene + 32361 33422 1062 Locate
psbC gene + 33370 34791 1422 Locate
trnS-UGA gene − 35033 35125 93 Locate
psbZ gene + 35470 35658 189 Locate
trnG-GCC gene + 35954 36024 71 Locate
trnM-CAU gene − 36193 36266 74 Locate
rps14 gene − 36416 36718 303 Locate
psaB gene − 36841 39045 2205 Locate
psaA gene − 39071 41323 2253 Locate
ycf3 gene − 42186 44127 1942 Locate
trnS-GGA gene + 44976 45062 87 Locate
rps4 gene − 45340 45945 606 Locate
trnT-UGU gene − 46330 46402 73 Locate
trnL-UAA gene + 47087 47647 561 Locate
trnF-GAA gene + 47952 48024 73 Locate
ndhJ gene − 48664 49140 477 Locate
ndhK gene − 49251 49928 678 Locate
ndhC gene − 49980 50342 363 Locate
trnM-CAU gene + 52133 52205 73 Locate
atpE gene − 52411 52812 402 Locate
atpB gene − 52809 54305 1497 Locate
rbcL gene + 55105 56538 1434 Locate
accD gene + 57227 58708 1482 Locate
psaI gene + 59192 59302 111 Locate
ycf4 gene + 59758 60312 555 Locate
cemA gene + 60979 61668 690 Locate
petA gene + 61878 62840 963 Locate
psbJ gene − 63878 64000 123 Locate
psbL gene − 64130 64246 117 Locate
psbF gene − 64270 64389 120 Locate
psbE gene − 64404 64655 252 Locate
petL gene + 65541 65636 96 Locate
petG gene + 65807 65920 114 Locate
trnW-CCA gene − 66030 66103 74 Locate
trnP-UGG gene − 66277 66350 74 Locate
psaJ gene + 66621 66755 135 Locate
rpl33 gene + 67208 67408 201 Locate
rps18 gene + 67592 67897 306 Locate
rpl20 gene − 68112 68498 387 Locate
rps12 gene − 69301 69414 114 Locate
clpP gene − 69537 71380 1844 Locate
psbB gene + 71810 73336 1527 Locate
psbT gene + 73526 73633 108 Locate
psbN gene − 73694 73825 132 Locate
psbH gene + 73931 74152 222 Locate
petB gene + 74274 75668 1395 Locate
petD gene + 75856 77070 1215 Locate
rpoA gene − 77253 78260 1008 Locate
rps11 gene − 78322 78738 417 Locate
rpl36 gene − 78848 78961 114 Locate
infA gene − 79057 79290 234 Locate
rps8 gene − 79427 79831 405 Locate
rpl14 gene − 80019 80387 369 Locate
rpl16 gene − 80526 81820 1295 Locate
rps3 gene − 81961 82623 663 Locate
rpl22 gene − 82608 83075 468 Locate
rps19 gene − 83145 83423 279 Locate
rpl2 gene − 83483 84972 1490 Locate
rpl23 gene − 84991 85272 282 Locate
trnM-CAU gene − 85438 85511 74 Locate
ycf2 gene + 85600 92433 6834 Locate
ycf15 gene + 92575 92772 198 Locate
trnL-CAA gene − 93028 93108 81 Locate
ndhB gene − 93672 95879 2208 Locate
rps7 gene − 96145 96612 468 Locate
rps12 gene − 96666 97459 794 Locate
trnV-GAC gene + 99080 99151 72 Locate
rrn16S gene + 99378 100868 1491 Locate
trnE-UUC gene + 101167 102186 1020 Locate
trnA-UGC gene + 102256 103133 878 Locate
rrn23S gene + 103299 106109 2811 Locate
rrn4.5S gene + 106208 106310 103 Locate
rrn5S gene + 106571 106691 121 Locate
trnR-ACG gene + 106935 107008 74 Locate
trnN-GUU gene − 107539 107610 72 Locate
ndhF gene − 108964 111195 2232 Locate
rpl32 gene + 111656 111841 186 Locate
trnL-UAG gene + 112510 112589 80 Locate
ccsA gene + 112684 113661 978 Locate
ndhD gene − 113919 115448 1530 Locate
psaC gene − 115540 115785 246 Locate
ndhE gene − 116034 116339 306 Locate
ndhG gene − 116566 117096 531 Locate
ndhI gene − 117467 117973 507 Locate
ndhA gene − 118054 120157 2104 Locate
ndhH gene − 120159 121346 1188 Locate
rps15 gene − 121446 121718 273 Locate
ycf1 gene − 122087 127636 5550 Locate
trnN-GUU gene + 127966 128037 72 Locate
trnR-ACG gene − 128568 128641 74 Locate
rrn5S gene − 128885 129005 121 Locate
rrn4.5S gene − 129266 129368 103 Locate
rrn23S gene − 129467 132277 2811 Locate
trnA-UGC gene − 132443 133320 878 Locate
trnE-UUC gene − 133390 134409 1020 Locate
rrn16S gene − 134708 136198 1491 Locate
trnV-GAC gene − 136425 136496 72 Locate
rps12 gene + 138117 138910 794 Locate
rps7 gene + 138964 139431 468 Locate
ndhB gene + 139697 141904 2208 Locate
trnL-CAA gene + 142468 142548 81 Locate
ycf15 gene − 142804 143001 198 Locate
ycf2 gene − 143143 149976 6834 Locate
trnM-CAU gene + 150065 150138 74 Locate
rpl23 gene + 150304 150585 282 Locate
rpl2 gene + 150604 152093 1490 Locate
Status Available
Accession PV930134.1
Length 152,195 bp
GC content 37.9%
Annotated genes 131
Gene sequence records 8
Translation Rna 36 Photosystem Ii 15 Other 14 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources