Coordinate-aware organelle record

Ocimum americanum chloroplast genome

Available NC_079695.1 152,460 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	12	86	74
psbA	gene	photosystem-ii	−	387	1446	1059
matK	gene	other	−	2002	3523	1521
trnK-UUU	gene	translation-rna	−	4217	4254	37
rps16	gene	ribosomal-protein	−	4789	5923	1134
trnQ-UUG	gene	translation-rna	−	6836	6908	72
psbK	gene	photosystem-ii	+	7288	7468	180
psbI	gene	photosystem-ii	+	7858	7969	111
trnS-GCU	gene	translation-rna	−	8131	8219	88
trnG-UCC	gene	translation-rna	+	8959	9719	760
trnR-UCU	gene	translation-rna	+	9909	9981	72
atpA	gene	atp-synthase	−	10084	11608	1524
atpF	gene	atp-synthase	−	11719	12959	1240
atpH	gene	atp-synthase	−	13264	13510	246
atpI	gene	atp-synthase	−	14514	15258	744
rps2	gene	ribosomal-protein	−	15483	16194	711
rpoC2	gene	rna-polymerase	−	16411	20569	4158
rpoC1	gene	rna-polymerase	−	20745	23575	2830
rpoB	gene	rna-polymerase	−	23601	26814	3213
trnC-GCA	gene	translation-rna	+	28041	28122	81
petN	gene	cytochrome	+	28274	28364	90
psbM	gene	photosystem-ii	−	29350	29455	105
trnD-GUC	gene	translation-rna	−	29978	30052	74
trnY-GUA	gene	translation-rna	−	30168	30252	84
trnE-UUC	gene	translation-rna	−	30322	30395	73
trnT-GGU	gene	translation-rna	+	31015	31087	72
psbD	gene	photosystem-ii	+	32349	33411	1062
psbC	gene	photosystem-ii	+	33358	34780	1422
trnS-UGA	gene	translation-rna	−	35018	35111	93
psbZ	gene	photosystem-ii	+	35444	35633	189
trnG-GCC	gene	translation-rna	+	35877	35948	71
trnM-CAU	gene	translation-rna	−	36109	36183	74
rps14	gene	ribosomal-protein	−	36429	36630	201
psaB	gene	photosystem-i	−	36752	38957	2205
psaA	gene	photosystem-i	−	38982	41235	2253
pafI	gene	other	−	42038	44007	1969
trnS-GGA	gene	translation-rna	+	44843	44930	87
rps4	gene	ribosomal-protein	−	45224	45830	606
trnT-UGU	gene	translation-rna	−	46223	46296	73
trnL-UAA	gene	translation-rna	+	46995	47555	560
trnF-GAA	gene	translation-rna	+	47837	47910	73
ndhJ	gene	nad-dehydrogenase	−	48584	49061	477
ndhK	gene	nad-dehydrogenase	−	49174	49852	678
ndhC	gene	nad-dehydrogenase	−	49903	50266	363
trnV-UAC	gene	translation-rna	−	51190	51843	653
trnM-CAU	gene	translation-rna	+	52023	52096	73
atpE	gene	atp-synthase	−	52286	52688	402
atpB	gene	atp-synthase	−	52684	54181	1497
rbcL	gene	other	+	54965	56318	1353
accD	gene	other	+	57091	58573	1482
psaI	gene	photosystem-i	+	59299	59410	111
pafII	gene	other	+	59857	60412	555
cemA	gene	other	+	61060	61750	690
petA	gene	cytochrome	+	61957	62920	963
psbJ	gene	photosystem-ii	−	63966	64089	123
psbL	gene	photosystem-ii	−	64223	64340	117
psbF	gene	photosystem-ii	−	64363	64483	120
psbE	gene	photosystem-ii	−	64497	64749	252
petL	gene	cytochrome	+	65631	65727	96
petG	gene	cytochrome	+	65895	66009	114
trnW-CCA	gene	translation-rna	−	66131	66205	74
trnP-UGG	gene	translation-rna	−	66373	66447	74
psaJ	gene	photosystem-i	+	66728	66863	135
rpl33	gene	ribosomal-protein	+	67306	67507	201
rps18	gene	ribosomal-protein	+	67667	67973	306
rpl20	gene	ribosomal-protein	−	68201	68588	387
rps12	gene	ribosomal-protein	−	69321	97523	28202
rps12	gene	ribosomal-protein	+	69321	139192	69871
clpP	gene	other	−	69575	71492	1917
psbB	gene	photosystem-ii	+	71948	73475	1527
psbT	gene	photosystem-ii	+	73665	73767	102
pbf1	gene	other	−	73832	73964	132
psbH	gene	photosystem-ii	+	74069	74288	219
petB	gene	cytochrome	+	74422	75797	1375
petD	gene	cytochrome	+	75985	77192	1207
rpoA	gene	rna-polymerase	−	77363	78371	1008
rps11	gene	ribosomal-protein	−	78440	78857	417
rpl36	gene	ribosomal-protein	−	78966	79080	114
infA	gene	other	−	79175	79409	234
rps8	gene	ribosomal-protein	−	79538	79943	405
rpl14	gene	ribosomal-protein	−	80113	80482	369
rpl16	gene	ribosomal-protein	−	80613	81879	1266
rps3	gene	ribosomal-protein	−	82022	82685	663
rpl22	gene	ribosomal-protein	−	82669	83143	474
rps19	gene	ribosomal-protein	−	83224	83374	150
rpl2	gene	ribosomal-protein	−	83568	85047	1479
rpl23	gene	ribosomal-protein	−	85065	85347	282
trnI-CAU	gene	translation-rna	−	85512	85586	74
ycf2	gene	other	+	85680	92502	6822
ycf15	gene	other	+	92643	92841	198
trnL-CAA	gene	translation-rna	−	93095	93176	81
ndhB	gene	nad-dehydrogenase	−	93747	95955	2208
rps7	gene	ribosomal-protein	−	96208	96676	468
trnV-GAC	gene	translation-rna	+	99185	99257	72
rrn16S	gene	ribosomal-rna	+	99477	100968	1491
trnI-GAU	gene	translation-rna	+	101265	101353	88
trnA-UGC	gene	translation-rna	+	102347	103226	879
rrn23S	gene	ribosomal-rna	+	103390	106201	2811
rrn4.5S	gene	ribosomal-rna	+	106299	106402	103
rrn5S	gene	ribosomal-rna	+	106657	106778	121
trnR-ACG	gene	translation-rna	+	107021	107095	74
trnN-GUU	gene	translation-rna	−	107666	107738	72
ycf1	gene	other	+	108079	109210	1131
ndhF	gene	nad-dehydrogenase	−	109103	111335	2232
rpl32	gene	ribosomal-protein	+	111813	111984	171
trnL-UAG	gene	translation-rna	+	112710	112790	80
ccsA	gene	other	+	112879	113851	972
ndhD	gene	nad-dehydrogenase	−	114077	115580	1503
psaC	gene	photosystem-i	−	115697	115943	246
ndhE	gene	nad-dehydrogenase	−	116203	116509	306
ndhG	gene	nad-dehydrogenase	−	116717	117248	531
ndhI	gene	nad-dehydrogenase	−	117610	118117	507
ndhA	gene	nad-dehydrogenase	−	118197	120295	2098
ndhH	gene	nad-dehydrogenase	−	120296	121478	1182
rps15	gene	ribosomal-protein	−	121592	121865	273
ycf1	gene	other	−	122307	127842	5535
trnN-GUU	gene	translation-rna	+	128183	128255	72
trnR-ACG	gene	translation-rna	−	128826	128900	74
rrn5S	gene	ribosomal-rna	−	129143	129264	121
rrn4.5S	gene	ribosomal-rna	−	129519	129622	103
rrn23S	gene	ribosomal-rna	−	129720	132531	2811
trnA-UGC	gene	translation-rna	−	132695	133574	879
trnI-GAU	gene	translation-rna	−	134568	134656	88
rrn16S	gene	ribosomal-rna	−	134953	136444	1491
trnV-GAC	gene	translation-rna	−	136664	136736	72
rps7	gene	ribosomal-protein	+	139245	139713	468
ndhB	gene	nad-dehydrogenase	+	139966	142174	2208
trnL-CAA	gene	translation-rna	+	142745	142826	81
ycf15	gene	other	−	143080	143278	198
ycf2	gene	other	−	143419	150241	6822
trnI-CAU	gene	translation-rna	+	150335	150409	74
rpl23	gene	ribosomal-protein	+	150574	150856	282
rpl2	gene	ribosomal-protein	+	150874	152353	1479

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_079695.1DNA · accDNC_079695DNA · atpBNC_079695DNA · matKNC_079695DNA · ndhFNC_079695DNA · psbANC_079695DNA · rbcLNC_079695DNA · rps12NC_079695DNA · ycf1NC_079695