Resource summary
This dossier brings together taxonomy, phylogeny access, omics modules, functional loci, and analysis tools so users can move smoothly from lineage-level browsing to locus-level inspection.
Species scientific record
Ocimum basilicum
罗勒
Sweet basil
Aliases: O. basilicum, Ocimum basilicum, Ocimum basilicum.gene tpm log1p +3
A curated Ocimum resource that supports comparative browsing across nuclear, chloroplast, mitochondrial, and transcriptome datasets within the Lamiaceae database.
Evidence coverage
Current public omics layers
3 available · 1 metadata only · 0 unavailable
Record overview
Taxonomy, biological context and the scope of the current release.
Ocimum basilicum is presented as an integrated entry point for phylogeny-guided navigation, organelle-genome visualization, nuclear-genome summaries, and functional-gene exploration.
Research relevance
Valuable for essential-oil research and comparative studies of aromatic metabolism.
- Distribution
- Cultivated worldwide in warm and temperate regions.
- Research / medicinal context
- Valuable for essential-oil research and comparative studies of aromatic metabolism.
Omics evidence matrix
Accession-backed, metadata-only and unavailable states remain scientifically distinct.
| Layer | Status | Accession / dataset | Assembly size | GC | Genes / features | Coordinates | |
|---|---|---|---|---|---|---|---|
Nuclear genome |
— | 583.7 Mb | 36.8% | 33947 | — | View layer | |
Chloroplast genome |
Available | PZ530182.1 |
152,407 bp | 37.8% | 133 | 133 loci | View layer |
Mitochondrial genome |
Available | PZ530181.1 |
554,653 bp | 44.0% | 66 | 66 loci | View layer |
Transcriptome |
Available | Ocimum_basilicum.gene_tpm_log1p |
10 samples | — | 65635 | — | View layer |
Genes linked to this species
Gene symbols are included only when DNA sequence or coordinate evidence exists.
| Gene | Full name / pathway | Localization | DNA records | Coordinate loci | |
|---|---|---|---|---|---|
| accD | Functional annotation not curatedNo pathway assignment |
— | 1 | 1 | Gene record |
| atp1 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atp4 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atp6 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atp8 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atp9 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpA | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpB | Functional annotation not curatedNo pathway assignment |
— | 1 | 1 | Gene record |
| atpE | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpF | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpH | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpI | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
Publication-safe DNA records
Public sequence content is DNA-only; no protein FASTA is exposed.
accDaccD
NC_0351431551 bpchloroplast genome
Open FASTA
atpBatpB
NC_0351431497 bpchloroplast genome
Open FASTA
matKmatK
NC_0351431521 bpchloroplast genome
Open FASTA
ndhFndhF
NC_0351432232 bpchloroplast genome
Open FASTA
psbApsbA
NC_0351431059 bpchloroplast genome
Open FASTA
rbcLrbcL
NC_0351431434 bpchloroplast genome
Open FASTA
rps12rps12
NC_035143908 bpchloroplast genome
Open FASTA
ycf1ycf1
NC_0351435538 bpchloroplast genome
Open FASTA
Pathway evidence
Family-level summaries and concrete candidate loci are kept separate.
15165 candidate records across 100 modules1481 strong locus records are available for inspection.