Coordinate-aware organelle record

Origanum vulgare chloroplast genome

Available PQ468695.1 151,827 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	151827	151827
psbA	gene	photosystem-ii	−	414	1473	1059
trnK-UUU	gene	translation-rna	−	1693	4245	2552
matK	gene	other	−	1978	3508	1530
rps16	gene	ribosomal-protein	−	4796	5941	1145
trnQ-UUG	gene	translation-rna	−	6870	6942	72
psbK	gene	photosystem-ii	+	7322	7508	186
psbI	gene	photosystem-ii	+	7899	8010	111
trnS-GCU	gene	translation-rna	−	8169	8257	88
trnG-UCC	gene	translation-rna	+	8956	9711	755
trnR-UCU	gene	translation-rna	+	9891	9963	72
atpA	gene	atp-synthase	−	10070	11594	1524
atpF	gene	atp-synthase	−	11688	12946	1258
atpH	gene	atp-synthase	−	13212	13458	246
atpI	gene	atp-synthase	−	14502	15246	744
rps2	gene	ribosomal-protein	−	15470	16181	711
rpoC2	gene	rna-polymerase	−	16403	20591	4188
rpoC1	gene	rna-polymerase	−	20763	23582	2819
rpoB	gene	rna-polymerase	−	23608	26821	3213
trnC-GCA	gene	translation-rna	+	27953	28024	71
petN	gene	cytochrome	+	28184	28274	90
psbM	gene	photosystem-ii	−	29251	29356	105
trnD-GUC	gene	translation-rna	−	29873	29947	74
trnY-GUA	gene	translation-rna	−	30057	30141	84
trnE-UUC	gene	translation-rna	−	30220	30293	73
trnT-GGU	gene	translation-rna	+	30864	30936	72
psbD	gene	photosystem-ii	+	32282	33344	1062
psbC	gene	photosystem-ii	+	33327	34713	1386
trnS-UGA	gene	translation-rna	−	34959	35052	93
psbZ	gene	photosystem-ii	+	35386	35575	189
trnG-GCC	gene	translation-rna	+	35846	35917	71
trnfM-CAU	gene	translation-rna	−	36079	36153	74
rps14	gene	ribosomal-protein	−	36302	36605	303
psaB	gene	photosystem-i	−	36727	38932	2205
psaA	gene	photosystem-i	−	38957	41210	2253
pafI	gene	other	−	41960	43890	1930
trnS-GGA	gene	translation-rna	+	44741	44828	87
rps4	gene	ribosomal-protein	−	45115	45721	606
trnT-UGU	gene	translation-rna	−	46112	46185	73
trnL-UAA	gene	translation-rna	+	46858	47413	555
trnF-GAA	gene	translation-rna	+	47705	47778	73
ndhJ	gene	nad-dehydrogenase	−	48414	48891	477
ndhK	gene	nad-dehydrogenase	−	49001	49679	678
ndhC	gene	nad-dehydrogenase	−	49730	50093	363
trnV-UAC	gene	translation-rna	−	51050	51695	645
trnM-CAU	gene	translation-rna	+	51875	51948	73
atpE	gene	atp-synthase	−	52143	52545	402
atpB	gene	atp-synthase	−	52541	54032	1491
rbcL	gene	other	+	54830	56264	1434
accD	gene	other	+	56954	58442	1488
psaI	gene	photosystem-i	+	58905	59016	111
pafII	gene	other	+	59462	60017	555
cemA	gene	other	+	60646	61336	690
petA	gene	cytochrome	+	61549	62512	963
psbJ	gene	photosystem-ii	−	63508	63631	123
psbL	gene	photosystem-ii	−	63765	63882	117
psbF	gene	photosystem-ii	−	63905	64025	120
psbE	gene	photosystem-ii	−	64039	64291	252
petL	gene	cytochrome	+	65168	65264	96
petG	gene	cytochrome	+	65433	65547	114
trnW-CCA	gene	translation-rna	−	65661	65735	74
trnP-UGG	gene	translation-rna	−	65908	65982	74
psaJ	gene	photosystem-i	+	66261	66396	135
rpl33	gene	ribosomal-protein	+	66846	67050	204
rps18	gene	ribosomal-protein	+	67220	67526	306
rpl20	gene	ribosomal-protein	−	67761	68148	387
rps12	gene	ribosomal-protein	−	68956	97042	28086
rps12	gene	ribosomal-protein	+	68956	138583	69627
clpP1	gene	other	−	69194	71097	1903
psbB	gene	photosystem-ii	+	71548	73075	1527
psbT	gene	photosystem-ii	+	73256	73358	102
pbf1	gene	other	−	73426	73558	132
psbH	gene	photosystem-ii	+	73663	73885	222
petB	gene	cytochrome	+	74010	75384	1374
petD	gene	cytochrome	+	75566	76745	1179
rpoA	gene	rna-polymerase	−	76927	77935	1008
rps11	gene	ribosomal-protein	−	78006	78423	417
rpl36	gene	ribosomal-protein	−	78532	78646	114
infA	gene	other	−	78741	78975	234
rps8	gene	ribosomal-protein	−	79096	79501	405
rpl14	gene	ribosomal-protein	−	79670	80039	369
rpl16	gene	ribosomal-protein	−	80170	80581	411
rps3	gene	ribosomal-protein	−	81595	82258	663
rpl22	gene	ribosomal-protein	−	82242	82710	468
rps19	gene	ribosomal-protein	−	82779	83058	279
rpl2	gene	ribosomal-protein	−	83118	84606	1488
rpl23	gene	ribosomal-protein	−	84624	84906	282
trnI-CAU	gene	translation-rna	−	85071	85145	74
ycf2	gene	other	+	85233	92019	6786
ycf15	gene	other	+	92109	92358	249
trnL-CAA	gene	translation-rna	−	92613	92694	81
ndhB	gene	nad-dehydrogenase	−	93254	95462	2208
rps7	gene	ribosomal-protein	−	95727	96195	468
trnV-GAC	gene	translation-rna	+	98678	98750	72
rrn16	gene	ribosomal-rna	+	98976	100467	1491
trnI-GAU	gene	translation-rna	+	100765	101790	1025
trnA-UGC	gene	translation-rna	+	101859	102737	878
rrn23	gene	ribosomal-rna	+	102902	105713	2811
rrn4.5	gene	ribosomal-rna	+	105811	105914	103
rrn5	gene	ribosomal-rna	+	106174	106295	121
trnR-ACG	gene	translation-rna	+	106538	106612	74
trnN-GUU	gene	translation-rna	−	107137	107209	72
ycf1	gene	other	+	107538	108669	1131
ndhF	gene	nad-dehydrogenase	−	108562	110794	2232
rpl32	gene	ribosomal-protein	+	111250	111421	171
trnL-UAG	gene	translation-rna	+	112143	112223	80
ccsA	gene	other	+	112325	113303	978
ndhD	gene	nad-dehydrogenase	−	113552	114941	1389
psaC	gene	photosystem-i	−	115178	115424	246
ndhE	gene	nad-dehydrogenase	−	115658	115964	306
ndhG	gene	nad-dehydrogenase	−	116187	116718	531
ndhI	gene	nad-dehydrogenase	−	117093	117600	507
ndhA	gene	nad-dehydrogenase	−	117675	119767	2092
ndhH	gene	nad-dehydrogenase	−	119768	120950	1182
rps15	gene	ribosomal-protein	−	121049	121322	273
ycf1	gene	other	−	121749	127293	5544
trnN-GUU	gene	translation-rna	+	127622	127694	72
trnR-ACG	gene	translation-rna	−	128219	128293	74
rrn5	gene	ribosomal-rna	−	128536	128657	121
rrn4.5	gene	ribosomal-rna	−	128917	129020	103
rrn23	gene	ribosomal-rna	−	129118	131929	2811
trnA-UGC	gene	translation-rna	−	132094	132972	878
trnI-GAU	gene	translation-rna	−	133041	134066	1025
rrn16	gene	ribosomal-rna	−	134364	135855	1491
trnV-GAC	gene	translation-rna	−	136081	136153	72
rps7	gene	ribosomal-protein	+	138636	139104	468
ndhB	gene	nad-dehydrogenase	+	139369	141577	2208
trnL-CAA	gene	translation-rna	+	142137	142218	81
ycf15	gene	other	−	142473	142722	249
ycf2	gene	other	−	142812	149598	6786
trnI-CAU	gene	translation-rna	+	149686	149760	74
rpl23	gene	ribosomal-protein	+	149925	150207	282
rpl2	gene	ribosomal-protein	+	150225	151713	1488
rps19	gene	ribosomal-protein	+	151772	151827	55

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePQ468695.1DNA · accDPQ468695DNA · atpBPQ468695DNA · matKPQ468695DNA · ndhFPQ468695DNA · psbAPQ468695DNA · rbcLPQ468695DNA · rps12PQ468695DNA · ycf1PQ468695