Coordinate-aware organelle record

Salvia hispanica chloroplast genome

Available NC_046838.1 150,980 bp 130 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	72	72
psbA	gene	photosystem-ii	−	388	1447	1059
trnK-UUU	gene	translation-rna	−	1678	4244	2566
matK	gene	other	−	1982	3518	1536
rps16	gene	ribosomal-protein	−	4817	5916	1099
trnQ-UUG	gene	translation-rna	−	6674	6746	72
psbK	gene	photosystem-ii	+	7131	7317	186
psbI	gene	photosystem-ii	+	7709	7820	111
trnS-GCU	gene	translation-rna	−	7969	8057	88
trnG-UCC	gene	translation-rna	+	8777	9538	761
trnR-UCU	gene	translation-rna	+	9713	9785	72
atpA	gene	atp-synthase	−	9899	11423	1524
atpF	gene	atp-synthase	−	11519	12778	1259
atpH	gene	atp-synthase	−	13049	13295	246
atpI	gene	atp-synthase	−	14309	15053	744
rps2	gene	ribosomal-protein	−	15276	16113	837
rpoC2	gene	rna-polymerase	−	16190	20378	4188
rpoC1	gene	rna-polymerase	−	20543	23355	2812
rpoB	gene	rna-polymerase	−	23381	26594	3213
trnC-GCA	gene	translation-rna	+	27755	27826	71
petN	gene	cytochrome	+	27981	28071	90
psbM	gene	photosystem-ii	−	29044	29149	105
trnD-GUC	gene	translation-rna	−	29519	29593	74
trnY-GUA	gene	translation-rna	−	29698	29782	84
trnE-UUC	gene	translation-rna	−	29852	29925	73
trnT-GGU	gene	translation-rna	+	30466	30538	72
psbD	gene	photosystem-ii	+	31910	32972	1062
psbC	gene	photosystem-ii	+	32919	34341	1422
trnS-UGA	gene	translation-rna	−	34579	34672	93
psbZ	gene	photosystem-ii	+	34999	35188	189
trnG-GCC	gene	translation-rna	+	35465	35536	71
trnfM-CAU	gene	translation-rna	−	35692	35766	74
rps14	gene	ribosomal-protein	−	35910	36213	303
psaB	gene	photosystem-i	−	36335	38540	2205
psaA	gene	photosystem-i	−	38565	40818	2253
ycf3	gene	other	−	41541	43478	1937
trnS-GGA	gene	translation-rna	+	44304	44391	87
rps4	gene	ribosomal-protein	−	44668	45274	606
trnT-UGU	gene	translation-rna	−	45632	45705	73
trnL-UAA	gene	translation-rna	+	46363	46938	575
trnF-GAA	gene	translation-rna	+	47225	47298	73
ndhJ	gene	nad-dehydrogenase	−	47774	48251	477
ndhK	gene	nad-dehydrogenase	−	48361	49039	678
ndhC	gene	nad-dehydrogenase	−	49090	49453	363
trnV-UAC	gene	translation-rna	−	50257	50903	646
trnM-CAU	gene	translation-rna	+	51083	51156	73
atpE	gene	atp-synthase	−	51345	51747	402
atpB	gene	atp-synthase	−	51743	53240	1497
rbcL	gene	other	+	54007	55462	1455
accD	gene	other	+	56134	57592	1458
psaI	gene	photosystem-i	+	58060	58171	111
ycf4	gene	other	+	58615	59170	555
cemA	gene	other	+	59812	60502	690
petA	gene	cytochrome	+	60723	61686	963
psbJ	gene	photosystem-ii	−	62671	62794	123
psbL	gene	photosystem-ii	−	62923	63145	222
psbF	gene	photosystem-ii	−	63063	63183	120
psbE	gene	photosystem-ii	−	63197	63449	252
petL	gene	cytochrome	+	64356	64452	96
petG	gene	cytochrome	+	64629	64743	114
trnW-CCA	gene	translation-rna	−	64857	64931	74
trnP-UGG	gene	translation-rna	−	65104	65178	74
psaJ	gene	photosystem-i	+	65454	65589	135
rpl33	gene	ribosomal-protein	+	66027	66228	201
rps18	gene	ribosomal-protein	+	66400	66706	306
rpl20	gene	ribosomal-protein	−	66942	67329	387
rps12	gene	ribosomal-protein	−	68139	96321	28182
rps12	gene	ribosomal-protein	+	68139	137726	69587
clpP	gene	other	−	68395	70307	1912
psbB	gene	photosystem-ii	+	70751	72278	1527
psbT	gene	photosystem-ii	+	72469	72571	102
psbN	gene	photosystem-ii	−	72636	72768	132
psbH	gene	photosystem-ii	+	72873	73095	222
petB	gene	cytochrome	+	73228	74594	1366
petD	gene	cytochrome	+	74781	75965	1184
rpoA	gene	rna-polymerase	−	76140	77148	1008
rps11	gene	ribosomal-protein	−	77217	77634	417
rpl36	gene	ribosomal-protein	−	77745	77859	114
infA	gene	other	−	77954	78188	234
rps8	gene	ribosomal-protein	−	78309	78714	405
rpl14	gene	ribosomal-protein	−	78885	79254	369
rpl16	gene	ribosomal-protein	−	79384	80660	1276
rps3	gene	ribosomal-protein	−	80802	81465	663
rpl22	gene	ribosomal-protein	−	81449	81917	468
rps19	gene	ribosomal-protein	−	81986	82265	279
rpl2	gene	ribosomal-protein	−	82326	83818	1492
rpl23	gene	ribosomal-protein	−	83836	84118	282
trnI-CAU	gene	translation-rna	−	84283	84357	74
ycf2	gene	other	+	84445	91285	6840
trnL-CAA	gene	translation-rna	−	91884	91965	81
ndhB	gene	nad-dehydrogenase	−	92524	94678	2154
rps7	gene	ribosomal-protein	−	95006	95474	468
trnV-GAC	gene	translation-rna	+	97989	98061	72
rrn16	gene	ribosomal-rna	+	98287	99778	1491
trnI-GAU	gene	translation-rna	+	100076	101095	1019
trnA-UGC	gene	translation-rna	+	101159	102036	877
rrn23	gene	ribosomal-rna	+	102201	105010	2809
rrn4.5	gene	ribosomal-rna	+	105110	105213	103
rrn5	gene	ribosomal-rna	+	105468	105589	121
trnR-ACG	gene	translation-rna	+	105832	105906	74
trnN-GUU	gene	translation-rna	−	106408	106480	72
ndhF	gene	nad-dehydrogenase	−	107827	110059	2232
rpl32	gene	ribosomal-protein	+	110512	110683	171
trnL-UAG	gene	translation-rna	+	111330	111410	80
ccsA	gene	other	+	111519	112497	978
ndhD	gene	nad-dehydrogenase	−	112727	114242	1515
psaC	gene	photosystem-i	−	114364	114610	246
ndhE	gene	nad-dehydrogenase	−	114860	115163	303
ndhG	gene	nad-dehydrogenase	−	115378	115909	531
ndhI	gene	nad-dehydrogenase	−	116267	116774	507
ndhA	gene	nad-dehydrogenase	−	116854	118957	2103
ndhH	gene	nad-dehydrogenase	−	118958	120140	1182
rps15	gene	ribosomal-protein	−	120239	120512	273
ycf1	gene	other	−	120918	126555	5637
trnN-GUU	gene	translation-rna	+	126773	126845	72
trnR-ACG	gene	translation-rna	−	127347	127421	74
rrn5	gene	ribosomal-rna	−	127664	127785	121
rrn4.5	gene	ribosomal-rna	−	128040	128143	103
rrn23	gene	ribosomal-rna	−	128243	131052	2809
trnA-UGC	gene	translation-rna	−	131217	132094	877
trnI-GAU	gene	translation-rna	−	132158	133177	1019
rrn16	gene	ribosomal-rna	−	133475	134966	1491
trnV-GAC	gene	translation-rna	−	135192	135264	72
rps7	gene	ribosomal-protein	+	137779	138247	468
ndhB	gene	nad-dehydrogenase	+	138575	140729	2154
trnL-CAA	gene	translation-rna	+	141288	141369	81
ycf2	gene	other	−	141968	148808	6840
trnI-CAU	gene	translation-rna	+	148896	148970	74
rpl23	gene	ribosomal-protein	+	149135	149417	282
rpl2	gene	ribosomal-protein	+	149435	150927	1492

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_046838.1DNA · accDNC_046838DNA · atpBNC_046838DNA · matKNC_046838DNA · ndhFNC_046838DNA · psbANC_046838DNA · rbcLNC_046838DNA · rps12NC_046838DNA · ycf1NC_046838