Satureja khuzistanica chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnR-UCU · PV480542.1 · 1,373–1,444 bp · −
trnT-CGU · PV480542.1 · 1,625–2,381 bp · −
psbI · PV480542.1 · 3,311–3,421 bp · −
psbK · PV480542.1 · 3,816–4,001 bp · −
rpl2 · PV480542.1 · 11,466–12,976 bp · −
rpl23 · PV480542.1 · 12,995–13,276 bp · −
trnM-CAU · PV480542.1 · 13,442–13,515 bp · −
trnL-CAA · PV480542.1 · 20,993–21,073 bp · −
ndhB · PV480542.1 · 21,634–23,841 bp · −
rps7 · PV480542.1 · 24,107–24,574 bp · −
rps12 · PV480542.1 · 24,628–25,421 bp · −
trnN-GUU · PV480542.1 · 35,499–35,570 bp · −
ccsA · PV480542.1 · 49,891–50,868 bp · −
trnL-UAG · PV480542.1 · 50,979–51,058 bp · −
rpl32 · PV480542.1 · 51,793–51,963 bp · −
trnR-ACG · PV480542.1 · 56,645–56,718 bp · −
rrn5S · PV480542.1 · 56,962–57,082 bp · −
rrn4.5S · PV480542.1 · 57,343–57,445 bp · −
rrn23S · PV480542.1 · 57,544–60,354 bp · −
trnA-UGC · PV480542.1 · 60,520–61,397 bp · −
trnI-GAU · PV480542.1 · 61,467–62,484 bp · −
rrn16S · PV480542.1 · 62,783–64,273 bp · −
trnV-GAC · PV480542.1 · 64,500–64,571 bp · −
ycf15 · PV480542.1 · 70,887–71,084 bp · −
petD · PV480542.1 · 86,481–87,667 bp · −
petB · PV480542.1 · 87,855–89,232 bp · −
psbH · PV480542.1 · 89,358–89,579 bp · −
psbT · PV480542.1 · 89,880–89,981 bp · −
psbB · PV480542.1 · 90,163–91,689 bp · −
rps18 · PV480542.1 · 95,726–96,031 bp · −
rpl33 · PV480542.1 · 96,202–96,405 bp · −
psaJ · PV480542.1 · 96,867–97,001 bp · −
petG · PV480542.1 · 97,733–97,846 bp · −
petL · PV480542.1 · 98,020–98,115 bp · −
petA · PV480542.1 · 100,796–101,758 bp · −
cemA · PV480542.1 · 101,972–102,661 bp · −
ycf4 · PV480542.1 · 103,316–103,870 bp · −
psaI · PV480542.1 · 104,317–104,427 bp · −
accD · PV480542.1 · 104,899–106,380 bp · −
rbcL · PV480542.1 · 107,083–108,516 bp · −
trnM-CAU · PV480542.1 · 111,405–111,477 bp · −
trnF-GAA · PV480542.1 · 115,583–115,655 bp · −
trnL-UAA · PV480542.1 · 115,957–116,530 bp · −
trnS-GGA · PV480542.1 · 118,535–118,621 bp · −
trnG-GCC · PV480542.1 · 127,466–127,536 bp · −
psbZ · PV480542.1 · 127,808–127,996 bp · −
psbC · PV480542.1 · 128,673–130,094 bp · −
psbD · PV480542.1 · 130,042–131,103 bp · −
trnT-GGU · PV480542.1 · 132,289–132,360 bp · −
petN · PV480542.1 · 134,925–135,014 bp · −
trnC-GCA · PV480542.1 · 135,175–135,245 bp · −
atpA · PV480542.1 · 151,588–151,924 bp · +
atpA · PV480542.1 · 1–83 bp · +
trnS-GCU · PV480542.1 · 3,072–3,159 bp · +
trnQ-UUG · PV480542.1 · 4,382–4,453 bp · +
rps16 · PV480542.1 · 5,406–6,550 bp · +
trnK-UUU · PV480542.1 · 7,100–9,683 bp · +
matK · PV480542.1 · 7,836–9,389 bp · +
psbA · PV480542.1 · 9,903–10,961 bp · +
trnH-GUG · PV480542.1 · 11,279–11,352 bp · +
ycf15 · PV480542.1 · 20,540–20,737 bp · +
rps12 · PV480542.1 · 94,186–94,299 bp · +
trnV-GAC · PV480542.1 · 27,053–27,124 bp · +
rrn16S · PV480542.1 · 27,351–28,841 bp · +
trnE-UUC · PV480542.1 · 29,140–30,157 bp · +
trnA-UGC · PV480542.1 · 30,227–31,104 bp · +
rrn23S · PV480542.1 · 31,270–34,080 bp · +
rrn4.5S · PV480542.1 · 34,179–34,281 bp · +
rrn5S · PV480542.1 · 34,542–34,662 bp · +
trnR-ACG · PV480542.1 · 34,906–34,979 bp · +
ycf1 · PV480542.1 · 35,899–41,457 bp · +
rps15 · PV480542.1 · 41,869–42,141 bp · +
ndhH · PV480542.1 · 42,241–43,422 bp · +
ndhA · PV480542.1 · 43,424–45,503 bp · +
ndhI · PV480542.1 · 45,584–46,090 bp · +
ndhG · PV480542.1 · 46,476–47,006 bp · +
ndhE · PV480542.1 · 47,235–47,540 bp · +
psaC · PV480542.1 · 47,781–48,026 bp · +
ndhD · PV480542.1 · 48,119–49,648 bp · +
ndhF · PV480542.1 · 52,447–54,669 bp · +
trnN-GUU · PV480542.1 · 56,054–56,125 bp · +
rps12 · PV480542.1 · 66,203–66,996 bp · +
rps7 · PV480542.1 · 67,050–67,517 bp · +
ndhB · PV480542.1 · 67,783–69,990 bp · +
trnL-CAA · PV480542.1 · 70,551–70,631 bp · +
trnM-CAU · PV480542.1 · 78,109–78,182 bp · +
rpl23 · PV480542.1 · 78,348–78,629 bp · +
rpl2 · PV480542.1 · 78,648–80,158 bp · +
rps19 · PV480542.1 · 80,219–80,497 bp · +
rpl22 · PV480542.1 · 80,567–81,034 bp · +
rps3 · PV480542.1 · 81,019–81,681 bp · +
rpl16 · PV480542.1 · 81,773–83,052 bp · +
rpl14 · PV480542.1 · 83,184–83,552 bp · +
rps8 · PV480542.1 · 83,738–84,142 bp · +
infA · PV480542.1 · 84,266–84,499 bp · +
rpl36 · PV480542.1 · 84,595–84,708 bp · +
rps11 · PV480542.1 · 84,818–85,234 bp · +
rpoA · PV480542.1 · 85,305–86,312 bp · +
psbN · PV480542.1 · 89,685–89,816 bp · +
clpP · PV480542.1 · 92,141–94,056 bp · +
rpl20 · PV480542.1 · 95,107–95,493 bp · +
trnP-UGG · PV480542.1 · 97,292–97,365 bp · +
trnW-CCA · PV480542.1 · 97,539–97,612 bp · +
psbE · PV480542.1 · 98,987–99,238 bp · +
psbF · PV480542.1 · 99,253–99,372 bp · +
psbL · PV480542.1 · 99,396–99,512 bp · +
psbJ · PV480542.1 · 99,647–99,769 bp · +
atpB · PV480542.1 · 109,306–110,796 bp · +
atpE · PV480542.1 · 110,793–111,194 bp · +
trnV-UAC · PV480542.1 · 111,658–112,308 bp · +
ndhC · PV480542.1 · 113,268–113,630 bp · +
ndhK · PV480542.1 · 113,682–114,359 bp · +
ndhJ · PV480542.1 · 114,470–114,946 bp · +
trnT-UGU · PV480542.1 · 117,191–117,263 bp · +
rps4 · PV480542.1 · 117,643–118,248 bp · +
ycf3 · PV480542.1 · 119,460–121,404 bp · +
psaA · PV480542.1 · 122,174–124,426 bp · +
psaB · PV480542.1 · 124,452–126,656 bp · +
rps14 · PV480542.1 · 126,780–127,082 bp · +
trnM-CAU · PV480542.1 · 127,227–127,300 bp · +
trnS-UGA · PV480542.1 · 128,336–128,428 bp · +
trnE-UUC · PV480542.1 · 132,921–132,993 bp · +
trnY-GUA · PV480542.1 · 133,076–133,159 bp · +
trnD-GUC · PV480542.1 · 133,269–133,342 bp · +
psbM · PV480542.1 · 133,861–133,965 bp · +
rpoB · PV480542.1 · 136,379–139,591 bp · +
rpoC1 · PV480542.1 · 139,618–142,429 bp · +
rpoC2 · PV480542.1 · 142,589–146,782 bp · +
rps2 · PV480542.1 · 147,009–147,719 bp · +
atpI · PV480542.1 · 147,949–148,692 bp · +
atpH · PV480542.1 · 149,725–149,970 bp · +
atpF · PV480542.1 · 150,245–151,492 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Satureja khuzistanica
ANNOTATED PLASTOME
PV480542.1
151,924 bp · 130 genes
Gene function
ATP synthase
Transfer RNA
Photosystem II
Ribosomal protein
Other
NADH dehydrogenase
Ribosomal RNA
Photosystem I
RNA polymerase
Cytochrome
0 37981 75962 113943 151924 bp
Forward strand 5′ → 3′
atpA trnS-GCU trnQ-UUG rps16 trnK-UUU matK psbA trnH-GUG ycf15 trnV-GAC rrn16S trnE-UUC trnA-UGC rrn23S rrn4.5S rrn5S trnR-ACG ycf1 rps15 ndhH ndhA ndhI ndhG ndhE psaC ndhD ndhF trnN-GUU rps12 rps7 ndhB trnL-CAA trnM-CAU rpl23 rpl2 rps19 rpl22 rps3 rpl16 rpl14 rps8 infA rpl36 rps11 rpoA psbN clpP rps12 rpl20 trnP-UGG trnW-CCA psbE psbF psbL psbJ atpB atpE trnV-UAC ndhC ndhK ndhJ trnT-UGU rps4 ycf3 psaA psaB rps14 trnM-CAU trnS-UGA trnE-UUC trnY-GUA trnD-GUC psbM rpoB rpoC1 rpoC2 rps2 atpI atpH atpF atpA
trnR-UCU trnT-CGU psbI psbK rpl2 rpl23 trnM-CAU trnL-CAA ndhB rps7 rps12 trnN-GUU ccsA trnL-UAG rpl32 trnR-ACG rrn5S rrn4.5S rrn23S trnA-UGC trnI-GAU rrn16S trnV-GAC ycf15 petD petB psbH psbT psbB rps18 rpl33 psaJ petG petL petA cemA ycf4 psaI accD rbcL trnM-CAU trnF-GAA trnL-UAA trnS-GGA trnG-GCC psbZ psbC psbD trnT-GGU petN trnC-GCA
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
132 local segments
Gene Type Group Strand Start End Length
atpA gene + 1 83 83 Locate
trnR-UCU gene − 1373 1444 72 Locate
trnT-CGU gene − 1625 2381 757 Locate
trnS-GCU gene + 3072 3159 88 Locate
psbI gene − 3311 3421 111 Locate
psbK gene − 3816 4001 186 Locate
trnQ-UUG gene + 4382 4453 72 Locate
rps16 gene + 5406 6550 1145 Locate
trnK-UUU gene + 7100 9683 2584 Locate
matK gene + 7836 9389 1554 Locate
psbA gene + 9903 10961 1059 Locate
trnH-GUG gene + 11279 11352 74 Locate
rpl2 gene − 11466 12976 1511 Locate
rpl23 gene − 12995 13276 282 Locate
trnM-CAU gene − 13442 13515 74 Locate
ycf15 gene + 20540 20737 198 Locate
trnL-CAA gene − 20993 21073 81 Locate
ndhB gene − 21634 23841 2208 Locate
rps7 gene − 24107 24574 468 Locate
rps12 gene − 24628 25421 794 Locate
trnV-GAC gene + 27053 27124 72 Locate
rrn16S gene + 27351 28841 1491 Locate
trnE-UUC gene + 29140 30157 1018 Locate
trnA-UGC gene + 30227 31104 878 Locate
rrn23S gene + 31270 34080 2811 Locate
rrn4.5S gene + 34179 34281 103 Locate
rrn5S gene + 34542 34662 121 Locate
trnR-ACG gene + 34906 34979 74 Locate
trnN-GUU gene − 35499 35570 72 Locate
ycf1 gene + 35899 41457 5559 Locate
rps15 gene + 41869 42141 273 Locate
ndhH gene + 42241 43422 1182 Locate
ndhA gene + 43424 45503 2080 Locate
ndhI gene + 45584 46090 507 Locate
ndhG gene + 46476 47006 531 Locate
ndhE gene + 47235 47540 306 Locate
psaC gene + 47781 48026 246 Locate
ndhD gene + 48119 49648 1530 Locate
ccsA gene − 49891 50868 978 Locate
trnL-UAG gene − 50979 51058 80 Locate
rpl32 gene − 51793 51963 171 Locate
ndhF gene + 52447 54669 2223 Locate
trnN-GUU gene + 56054 56125 72 Locate
trnR-ACG gene − 56645 56718 74 Locate
rrn5S gene − 56962 57082 121 Locate
rrn4.5S gene − 57343 57445 103 Locate
rrn23S gene − 57544 60354 2811 Locate
trnA-UGC gene − 60520 61397 878 Locate
trnI-GAU gene − 61467 62484 1018 Locate
rrn16S gene − 62783 64273 1491 Locate
trnV-GAC gene − 64500 64571 72 Locate
rps12 gene + 66203 66996 794 Locate
rps7 gene + 67050 67517 468 Locate
ndhB gene + 67783 69990 2208 Locate
trnL-CAA gene + 70551 70631 81 Locate
ycf15 gene − 70887 71084 198 Locate
trnM-CAU gene + 78109 78182 74 Locate
rpl23 gene + 78348 78629 282 Locate
rpl2 gene + 78648 80158 1511 Locate
rps19 gene + 80219 80497 279 Locate
rpl22 gene + 80567 81034 468 Locate
rps3 gene + 81019 81681 663 Locate
rpl16 gene + 81773 83052 1280 Locate
rpl14 gene + 83184 83552 369 Locate
rps8 gene + 83738 84142 405 Locate
infA gene + 84266 84499 234 Locate
rpl36 gene + 84595 84708 114 Locate
rps11 gene + 84818 85234 417 Locate
rpoA gene + 85305 86312 1008 Locate
petD gene − 86481 87667 1187 Locate
petB gene − 87855 89232 1378 Locate
psbH gene − 89358 89579 222 Locate
psbN gene + 89685 89816 132 Locate
psbT gene − 89880 89981 102 Locate
psbB gene − 90163 91689 1527 Locate
clpP gene + 92141 94056 1916 Locate
rps12 gene + 94186 94299 114 Locate
rpl20 gene + 95107 95493 387 Locate
rps18 gene − 95726 96031 306 Locate
rpl33 gene − 96202 96405 204 Locate
psaJ gene − 96867 97001 135 Locate
trnP-UGG gene + 97292 97365 74 Locate
trnW-CCA gene + 97539 97612 74 Locate
petG gene − 97733 97846 114 Locate
petL gene − 98020 98115 96 Locate
psbE gene + 98987 99238 252 Locate
psbF gene + 99253 99372 120 Locate
psbL gene + 99396 99512 117 Locate
psbJ gene + 99647 99769 123 Locate
petA gene − 100796 101758 963 Locate
cemA gene − 101972 102661 690 Locate
ycf4 gene − 103316 103870 555 Locate
psaI gene − 104317 104427 111 Locate
accD gene − 104899 106380 1482 Locate
rbcL gene − 107083 108516 1434 Locate
atpB gene + 109306 110796 1491 Locate
atpE gene + 110793 111194 402 Locate
trnM-CAU gene − 111405 111477 73 Locate
trnV-UAC gene + 111658 112308 651 Locate
ndhC gene + 113268 113630 363 Locate
ndhK gene + 113682 114359 678 Locate
ndhJ gene + 114470 114946 477 Locate
trnF-GAA gene − 115583 115655 73 Locate
trnL-UAA gene − 115957 116530 574 Locate
trnT-UGU gene + 117191 117263 73 Locate
rps4 gene + 117643 118248 606 Locate
trnS-GGA gene − 118535 118621 87 Locate
ycf3 gene + 119460 121404 1945 Locate
psaA gene + 122174 124426 2253 Locate
psaB gene + 124452 126656 2205 Locate
rps14 gene + 126780 127082 303 Locate
trnM-CAU gene + 127227 127300 74 Locate
trnG-GCC gene − 127466 127536 71 Locate
psbZ gene − 127808 127996 189 Locate
trnS-UGA gene + 128336 128428 93 Locate
psbC gene − 128673 130094 1422 Locate
psbD gene − 130042 131103 1062 Locate
trnT-GGU gene − 132289 132360 72 Locate
trnE-UUC gene + 132921 132993 73 Locate
trnY-GUA gene + 133076 133159 84 Locate
trnD-GUC gene + 133269 133342 74 Locate
psbM gene + 133861 133965 105 Locate
petN gene − 134925 135014 90 Locate
trnC-GCA gene − 135175 135245 71 Locate
rpoB gene + 136379 139591 3213 Locate
rpoC1 gene + 139618 142429 2812 Locate
rpoC2 gene + 142589 146782 4194 Locate
rps2 gene + 147009 147719 711 Locate
atpI gene + 147949 148692 744 Locate
atpH gene + 149725 149970 246 Locate
atpF gene + 150245 151492 1248 Locate
atpA gene + 151588 151924 337 Locate
Status Available
Accession PV480542.1
Length 151,924 bp
GC content 37.9%
Annotated genes 130
Gene sequence records 8
Atp Synthase 7 Translation Rna 37 Photosystem Ii 15 Ribosomal Protein 26 Other 12 Nad Dehydrogenase 12 Ribosomal Rna 8 Photosystem I 5 Rna Polymerase 4 Cytochrome 6
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources