Coordinate-aware organelle record

Scutellaria colpodea chloroplast genome

Available PZ130064.1 151,891 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	373	1432	1059
trnK-UUU	gene	translation-rna	−	1677	4251	2574
matK	gene	other	−	1963	3490	1527
rps16	gene	ribosomal-protein	−	5157	6315	1158
trnQ-UUC	gene	translation-rna	−	7060	7132	72
psbK	gene	photosystem-ii	+	7456	7642	186
psbI	gene	photosystem-ii	+	8031	8142	111
trnS-GCU	gene	translation-rna	−	8261	8349	88
trnG-CGA	gene	translation-rna	+	9131	9888	757
trnR-UCU	gene	translation-rna	+	10062	10134	72
atpA	gene	atp-synthase	−	10230	11754	1524
atpF	gene	atp-synthase	−	11835	13065	1230
atpH	gene	atp-synthase	−	13425	13671	246
atpI	gene	atp-synthase	−	14658	15402	744
rps2	gene	ribosomal-protein	−	15747	16458	711
rpoC2	gene	rna-polymerase	−	16672	20878	4206
rpoC1	gene	rna-polymerase	−	21032	23869	2837
rpoB	gene	rna-polymerase	−	23895	27108	3213
trnC-GCA	gene	translation-rna	+	28268	28339	71
petN	gene	cytochrome	+	29056	29146	90
psbM	gene	photosystem-ii	−	30164	30269	105
trnD-GUC	gene	translation-rna	−	30794	30868	74
trnY-GUA	gene	translation-rna	−	30981	31065	84
trnE-UUC	gene	translation-rna	−	31124	31197	73
trnT-GGU	gene	translation-rna	+	31779	31852	73
psbD	gene	photosystem-ii	+	33156	34218	1062
psbC	gene	photosystem-ii	+	34165	35587	1422
trnS-UCA	gene	translation-rna	−	35821	35914	93
psbZ	gene	photosystem-ii	+	36229	36418	189
trnG-GCC	gene	translation-rna	+	36694	36765	71
trnfM-GAU	gene	translation-rna	−	36911	36985	74
rps14	gene	ribosomal-protein	−	37139	37442	303
psaB	gene	photosystem-i	−	37570	39775	2205
psaA	gene	photosystem-i	−	39800	42053	2253
ycf3	gene	other	−	42749	44670	1921
trnS-GGA	gene	translation-rna	+	45559	45646	87
rps4	gene	ribosomal-protein	−	45921	46527	606
trnT-UGU	gene	translation-rna	−	46873	46946	73
trnL-UAA	gene	translation-rna	+	47621	48182	561
trnF-GAA	gene	translation-rna	+	48482	48555	73
ndhJ	gene	nad-dehydrogenase	−	49202	49679	477
ndhK	gene	nad-dehydrogenase	−	49787	50465	678
ndhC	gene	nad-dehydrogenase	−	50518	50881	363
trnV-UAC	gene	translation-rna	−	51866	52519	653
trnM-CAU	gene	translation-rna	+	52707	52780	73
atpE	gene	atp-synthase	−	52973	53375	402
atpB	gene	atp-synthase	−	53371	54868	1497
rbcL	gene	other	+	55640	57083	1443
accD	gene	other	+	57796	59275	1479
psaI	gene	photosystem-i	+	59981	60092	111
ycf4	gene	other	+	60525	61080	555
cemA	gene	other	+	61828	62428	600
petA	gene	cytochrome	+	62634	63597	963
pabJ	gene	other	−	64605	64728	123
psbL	gene	photosystem-ii	−	64861	64978	117
psbF	gene	photosystem-ii	−	65001	65121	120
psbE	gene	photosystem-ii	−	65135	65387	252
petL	gene	cytochrome	+	66264	66360	96
petG	gene	cytochrome	+	66535	66649	114
trnW-CCA	gene	translation-rna	−	66767	66841	74
trnP-UGG	gene	translation-rna	−	67010	67084	74
psaJ	gene	photosystem-i	+	67355	67490	135
rpl33	gene	ribosomal-protein	+	67965	68166	201
rps18	gene	ribosomal-protein	+	68340	68646	306
rpl20	gene	ribosomal-protein	−	68880	69267	387
rps12	gene	ribosomal-protein	−	70061	98118	28057
rps12	gene	ribosomal-protein	+	70061	138659	68598
clpP	gene	other	−	70316	72245	1929
psbB	gene	photosystem-ii	+	72696	74223	1527
psbT	gene	photosystem-ii	+	74414	74522	108
psbN	gene	photosystem-ii	−	74582	74714	132
psbH	gene	photosystem-ii	+	74817	75039	222
petB	gene	cytochrome	+	75163	76534	1371
petD	gene	cytochrome	+	76716	77923	1207
rpoA	gene	rna-polymerase	−	78277	79078	801
rps11	gene	ribosomal-protein	−	79149	79566	417
rps36	gene	ribosomal-protein	−	79667	79781	114
infA	gene	other	−	79875	80109	234
rps8	gene	ribosomal-protein	−	80232	80643	411
rpl14	gene	ribosomal-protein	−	80796	81165	369
rpl16	gene	ribosomal-protein	−	81291	82525	1234
rps3	gene	ribosomal-protein	−	82680	83343	663
rpl22	gene	ribosomal-protein	−	83344	83800	456
rps19	gene	ribosomal-protein	−	83859	84138	279
rpl2	gene	ribosomal-protein	−	84192	85674	1482
rpl23	gene	ribosomal-protein	−	85692	85974	282
trnI-GAU	gene	translation-rna	−	86133	86207	74
ycf2	gene	other	+	86295	93096	6801
ycf15	gene	other	+	93237	93435	198
trnL-CAA	gene	translation-rna	−	93694	93775	81
ndhB	gene	nad-dehydrogenase	−	94317	96529	2212
rps7	gene	ribosomal-protein	−	96803	97271	468
trnV-GAC	gene	translation-rna	+	99686	99758	72
rrn16	gene	ribosomal-rna	+	99984	101475	1491
trnI-GAU	gene	translation-rna	+	101773	102793	1020
trnA-UGC	gene	translation-rna	+	102858	103749	891
rrn23	gene	ribosomal-rna	+	103918	106730	2812
rrn4.5	gene	ribosomal-rna	+	106828	106931	103
rrn5	gene	ribosomal-rna	+	107178	107299	121
trnR-ACG	gene	translation-rna	+	107533	107607	74
trnN-GUU	gene	translation-rna	−	108155	108227	72
ycf1	gene	other	+	108556	109411	855
ndhF	gene	nad-dehydrogenase	−	109283	111545	2262
rpl32	gene	ribosomal-protein	+	111873	112050	177
trnL-UAG	gene	translation-rna	+	112495	112575	80
ccsA	gene	other	+	112663	113638	975
ndhD	gene	nad-dehydrogenase	−	113894	115424	1530
psaC	gene	photosystem-i	−	115524	115770	246
ndhE	gene	nad-dehydrogenase	−	116025	116331	306
ndhG	gene	nad-dehydrogenase	−	116547	117078	531
ndhI	gene	nad-dehydrogenase	−	117444	117945	501
ndhA	gene	nad-dehydrogenase	−	118030	120152	2122
ndhH	gene	nad-dehydrogenase	−	120153	121335	1182
rps15	gene	ribosomal-protein	−	121431	121704	273
ycf1	gene	other	−	121901	127427	5526
trnN-GUU	gene	translation-rna	+	127756	127828	72
trnR-ACC	gene	translation-rna	−	128376	128450	74
rrn5	gene	ribosomal-rna	−	128684	128805	121
rrn4.5	gene	ribosomal-rna	−	129052	129155	103
rrn23	gene	ribosomal-rna	−	129253	132065	2812
trnA-UGC	gene	translation-rna	−	132234	133125	891
trnI-GAU	gene	translation-rna	−	133190	134210	1020
rrn16	gene	ribosomal-rna	−	134508	135999	1491
trnV-GAC	gene	translation-rna	−	136225	136297	72
rps7	gene	ribosomal-protein	+	138712	139180	468
ndhB	gene	nad-dehydrogenase	+	139454	141666	2212
trnL-CAA	gene	translation-rna	+	142208	142289	81
ycf15	gene	other	−	142548	142746	198
ycf2	gene	other	−	142887	149688	6801
trnI-CAU	gene	translation-rna	+	149776	149850	74
rpl23	gene	ribosomal-protein	+	150009	150291	282
rpl2	gene	ribosomal-protein	+	150309	151791	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePZ130064.1DNA · accDPZ130064DNA · atpBPZ130064DNA · matKPZ130064DNA · ndhFPZ130064DNA · psbAPZ130064DNA · rbcLPZ130064DNA · rps12PZ130064DNA · ycf1PZ130064