Coordinate-aware organelle record

Scutellaria hypericifolia chloroplast genome

Available MW286270.1 151,574 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	0	73	73
psbA	gene	photosystem-ii	−	375	1434	1059
trnK-UUU	gene	translation-rna	−	1674	4262	2588
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5155	6326	1171
trnQ-UUG	gene	translation-rna	−	7401	7473	72
psbK	gene	photosystem-ii	+	7797	7983	186
psbI	gene	photosystem-ii	+	8371	8482	111
trnS-GCU	gene	translation-rna	−	8594	8682	88
trnS-CGA	gene	translation-rna	+	9307	10064	757
trnR-UCU	gene	translation-rna	+	10237	10309	72
atpA	gene	atp-synthase	−	10405	11929	1524
atpF	gene	atp-synthase	−	12011	13240	1229
atpH	gene	atp-synthase	−	13610	13856	246
atpI	gene	atp-synthase	−	14844	15588	744
rps2	gene	ribosomal-protein	−	15941	16652	711
rpoC2	gene	rna-polymerase	−	16865	21071	4206
rpoC1	gene	rna-polymerase	−	21225	24049	2824
rpoB	gene	rna-polymerase	−	24075	27288	3213
trnC-GCA	gene	translation-rna	+	28442	28513	71
petN	gene	cytochrome	+	28795	28885	90
psbM	gene	photosystem-ii	−	29901	30006	105
trnD-GUC	gene	translation-rna	−	30532	30606	74
trnY-GUA	gene	translation-rna	−	30724	30808	84
trnE-UUC	gene	translation-rna	−	30867	30940	73
trnT-GGU	gene	translation-rna	+	31515	31587	72
psbD	gene	photosystem-ii	+	32749	33811	1062
psbC	gene	photosystem-ii	+	33758	35180	1422
trnS-UGA	gene	translation-rna	−	35415	35508	93
psbZ	gene	photosystem-ii	+	35823	36012	189
trnG-GCC	gene	translation-rna	+	36286	36357	71
trnM-CAU	gene	translation-rna	−	36502	36576	74
rps14	gene	ribosomal-protein	−	36730	37033	303
psaB	gene	photosystem-i	−	37160	39365	2205
psaA	gene	photosystem-i	−	39390	41643	2253
ycf3	gene	other	−	42330	44255	1925
trnS-GGA	gene	translation-rna	+	45146	45233	87
rps4	gene	ribosomal-protein	−	45514	46120	606
trnT-UGU	gene	translation-rna	−	46460	46533	73
trnL-UAA	gene	translation-rna	+	47236	47803	567
trnF-GAA	gene	translation-rna	+	48111	48184	73
ndhJ	gene	nad-dehydrogenase	−	48831	49308	477
ndhK	gene	nad-dehydrogenase	−	49416	50094	678
ndhC	gene	nad-dehydrogenase	−	50146	50509	363
trnM-CAU	gene	translation-rna	+	52332	52405	73
atpE	gene	atp-synthase	−	52613	53015	402
atpB	gene	atp-synthase	−	53011	54508	1497
rbcL	gene	other	+	55271	56714	1443
accD	gene	other	+	57431	58910	1479
psaI	gene	photosystem-i	+	59622	59733	111
ycf4	gene	other	+	60166	60721	555
cemA	gene	other	+	61464	62064	600
petA	gene	cytochrome	+	62265	63228	963
psbJ	gene	photosystem-ii	−	64236	64359	123
psbL	gene	photosystem-ii	−	64492	64609	117
psbF	gene	photosystem-ii	−	64632	64752	120
psbE	gene	photosystem-ii	−	64766	65018	252
petL	gene	cytochrome	+	65896	65992	96
petG	gene	cytochrome	+	66166	66280	114
trnW-CCA	gene	translation-rna	−	66398	66472	74
trnP-UGG	gene	translation-rna	−	66641	66715	74
psaJ	gene	photosystem-i	+	66985	67120	135
rpl33	gene	ribosomal-protein	+	67594	67795	201
rps18	gene	ribosomal-protein	+	67969	68275	306
rpl20	gene	ribosomal-protein	−	68508	68895	387
rps12	gene	ribosomal-protein	−	69692	97777	28085
rps12	gene	ribosomal-protein	+	69692	137782	68090
clpP	gene	other	−	69940	71879	1939
psbB	gene	photosystem-ii	+	72336	73863	1527
psbT	gene	photosystem-ii	+	74054	74162	108
psbN	gene	photosystem-ii	−	74222	74354	132
psbH	gene	photosystem-ii	+	74457	74679	222
petB	gene	cytochrome	+	74803	76164	1361
petD	gene	cytochrome	+	76352	77549	1197
rpoA	gene	rna-polymerase	−	77873	78725	852
rps11	gene	ribosomal-protein	−	78796	79213	417
rpl36	gene	ribosomal-protein	−	79314	79428	114
infA	gene	other	−	79522	79756	234
rps8	gene	ribosomal-protein	−	79880	80291	411
rpl14	gene	ribosomal-protein	−	80453	80822	369
rpl16	gene	ribosomal-protein	−	80948	82180	1232
rps3	gene	ribosomal-protein	−	82336	83005	669
rpl22	gene	ribosomal-protein	−	83006	83462	456
rps19	gene	ribosomal-protein	−	83521	83746	225
rpl2	gene	ribosomal-protein	−	83854	85336	1482
rpl23	gene	ribosomal-protein	−	85354	85636	282
trnM-CAU	gene	translation-rna	−	85795	85869	74
ycf2	gene	other	+	85957	92755	6798
ycf15	gene	other	+	92896	93094	198
trnL-CAA	gene	translation-rna	−	93353	93434	81
ndhB	gene	nad-dehydrogenase	−	93976	96188	2212
rps7	gene	ribosomal-protein	−	96462	96930	468
trnV-GAC	gene	translation-rna	+	99345	99417	72
rrn16S	gene	ribosomal-rna	+	99643	101134	1491
trnI	gene	translation-rna	+	101432	102453	1021
trnA-UGC	gene	translation-rna	+	102517	103408	891
rrn23S	gene	ribosomal-rna	+	103577	106389	2812
rrn4.5S	gene	ribosomal-rna	+	106487	106711	224
rrn5S	gene	ribosomal-rna	+	106837	106968	131
trnR-ACG	gene	translation-rna	+	107192	107266	74
trnN-GUU	gene	translation-rna	−	107822	107894	72
ndhF	gene	nad-dehydrogenase	−	108970	111205	2235
rpl32	gene	ribosomal-protein	+	111718	111895	177
trnL-UAG	gene	translation-rna	+	112180	112260	80
ccsA	gene	other	+	112351	113326	975
ndhD	gene	nad-dehydrogenase	−	113559	115089	1530
psaC	gene	photosystem-i	−	115188	115434	246
ndhE	gene	nad-dehydrogenase	−	115689	115995	306
ndhG	gene	nad-dehydrogenase	−	116217	116748	531
ndhI	gene	nad-dehydrogenase	−	117043	117610	567
ndhA	gene	nad-dehydrogenase	−	117690	119798	2108
ndhH	gene	nad-dehydrogenase	−	119799	120981	1182
rps15	gene	ribosomal-protein	−	121077	121410	333
ycf1	gene	other	−	121546	127093	5547
trnN-GUU	gene	translation-rna	+	127422	127494	72
trnR-ACG	gene	translation-rna	−	128050	128124	74
rrn5S	gene	ribosomal-rna	−	128348	128479	131
rrn4.5S	gene	ribosomal-rna	−	128605	128829	224
rrn23S	gene	ribosomal-rna	−	128927	131739	2812
trnA-UGC	gene	translation-rna	−	131908	132799	891
trnI	gene	translation-rna	−	132863	133884	1021
rrn16S	gene	ribosomal-rna	−	134182	135673	1491
trnV-GAC	gene	translation-rna	−	135899	135971	72
rps7	gene	ribosomal-protein	+	138386	138854	468
ndhB	gene	nad-dehydrogenase	+	139128	141340	2212
trnL-CAA	gene	translation-rna	+	141882	141963	81
ycf15	gene	other	−	142222	142420	198
ycf2	gene	other	−	142561	149359	6798
trnM-CAU	gene	translation-rna	+	149447	149521	74
rpl23	gene	ribosomal-protein	+	149680	149962	282
rpl2	gene	ribosomal-protein	+	149980	151462	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW286270.1DNA · accDMW286270DNA · atpBMW286270DNA · matKMW286270DNA · ndhFMW286270DNA · psbAMW286270DNA · rbcLMW286270DNA · rps12MW286270DNA · ycf1MW286270