Scutellaria insignis chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
trnH-GUG · NC_028533.1 · 3–76 bp · −
psbA · NC_028533.1 · 370–1,428 bp · −
trnK-UUU · NC_028533.1 · 1,674–4,246 bp · −
matK · NC_028533.1 · 1,957–3,492 bp · −
rps16 · NC_028533.1 · 5,123–6,286 bp · −
trnQ-UUC · NC_028533.1 · 7,301–7,372 bp · −
trnS-GCU · NC_028533.1 · 8,501–8,588 bp · −
atpA · NC_028533.1 · 10,249–11,772 bp · −
atpF · NC_028533.1 · 11,855–13,082 bp · −
atpH · NC_028533.1 · 13,441–13,686 bp · −
atpI · NC_028533.1 · 14,682–15,425 bp · −
rps2 · NC_028533.1 · 15,773–16,483 bp · −
rpoC2 · NC_028533.1 · 16,700–20,905 bp · −
rpoC1 · NC_028533.1 · 21,060–23,889 bp · −
rpoB · NC_028533.1 · 23,916–27,128 bp · −
psbM · NC_028533.1 · 30,205–30,309 bp · −
trnD-GUC · NC_028533.1 · 30,836–30,909 bp · −
trnY-GUA · NC_028533.1 · 31,023–31,106 bp · −
trnE-UUC · NC_028533.1 · 31,166–31,238 bp · −
trnS-UCA · NC_028533.1 · 35,853–35,945 bp · −
trnfM-GAU · NC_028533.1 · 36,941–37,014 bp · −
rps14 · NC_028533.1 · 37,164–37,466 bp · −
psaB · NC_028533.1 · 37,594–39,798 bp · −
psaA · NC_028533.1 · 39,824–42,076 bp · −
ycf3 · NC_028533.1 · 42,759–44,673 bp · −
rps4 · NC_028533.1 · 45,913–46,518 bp · −
trnT-UGU · NC_028533.1 · 46,861–46,933 bp · −
ndhJ · NC_028533.1 · 49,201–49,677 bp · −
ndhK · NC_028533.1 · 49,785–50,462 bp · −
ndhC · NC_028533.1 · 50,515–50,877 bp · −
trnV-UAC · NC_028533.1 · 51,724–52,376 bp · −
atpE · NC_028533.1 · 52,845–53,246 bp · −
atpB · NC_028533.1 · 53,243–54,730 bp · −
pabJ · NC_028533.1 · 64,326–64,448 bp · −
psbL · NC_028533.1 · 64,582–64,698 bp · −
psbF · NC_028533.1 · 64,722–64,841 bp · −
psbE · NC_028533.1 · 64,856–65,107 bp · −
trnW-CCA · NC_028533.1 · 66,520–66,593 bp · −
trnP-UGG · NC_028533.1 · 66,763–66,836 bp · −
rpl20 · NC_028533.1 · 68,645–69,031 bp · −
rps12 · NC_028533.1 · 69,832–69,945 bp · −
rps12 · NC_028533.1 · 97,704–97,946 bp · −
clpP · NC_028533.1 · 70,088–72,011 bp · −
psbN · NC_028533.1 · 74,371–74,502 bp · −
rpoA · NC_028533.1 · 77,873–78,886 bp · −
rps11 · NC_028533.1 · 78,958–79,374 bp · −
rps36 · NC_028533.1 · 79,476–79,589 bp · −
infA · NC_028533.1 · 79,685–79,918 bp · −
rps8 · NC_028533.1 · 80,038–80,448 bp · −
rpl14 · NC_028533.1 · 80,620–80,988 bp · −
rpl16 · NC_028533.1 · 81,115–82,341 bp · −
rps3 · NC_028533.1 · 82,496–83,158 bp · −
rpl22 · NC_028533.1 · 83,160–83,615 bp · −
rps19 · NC_028533.1 · 83,676–83,954 bp · −
rpl2 · NC_028533.1 · 84,009–85,491 bp · −
rpl23 · NC_028533.1 · 85,510–85,791 bp · −
trnI-GAU · NC_028533.1 · 85,951–86,024 bp · −
trnL-CAA · NC_028533.1 · 93,523–93,603 bp · −
ndhB · NC_028533.1 · 94,146–96,357 bp · −
rps7 · NC_028533.1 · 96,632–97,099 bp · −
ndhF · NC_028533.1 · 109,121–111,361 bp · −
ndhD · NC_028533.1 · 113,879–115,384 bp · −
psaC · NC_028533.1 · 115,501–115,746 bp · −
ndhE · NC_028533.1 · 116,003–116,308 bp · −
ndhG · NC_028533.1 · 116,529–117,059 bp · −
ndhI · NC_028533.1 · 117,424–117,924 bp · −
ndhA · NC_028533.1 · 118,005–120,095 bp · −
ndhH · NC_028533.1 · 120,097–121,278 bp · −
rps15 · NC_028533.1 · 121,381–121,653 bp · −
ycf1 · NC_028533.1 · 121,920–127,448 bp · −
trnR-ACC · NC_028533.1 · 128,396–128,469 bp · −
rrn5 · NC_028533.1 · 128,704–128,824 bp · −
rrn4.5 · NC_028533.1 · 129,072–129,174 bp · −
rrn23 · NC_028533.1 · 129,273–132,083 bp · −
trnA-UGC · NC_028533.1 · 132,253–133,136 bp · −
trnI-GAU · NC_028533.1 · 133,202–134,221 bp · −
rrn16 · NC_028533.1 · 134,520–136,010 bp · −
trnV-GAC · NC_028533.1 · 136,238–136,309 bp · −
ycf15 · NC_028533.1 · 142,555–142,803 bp · −
ycf2 · NC_028533.1 · 142,894–149,709 bp · −
psbK · NC_028533.1 · 7,697–7,882 bp · +
psbI · NC_028533.1 · 8,273–8,383 bp · +
trnG-CGA · NC_028533.1 · 9,150–9,910 bp · +
trnR-UCU · NC_028533.1 · 10,081–10,152 bp · +
trnC-GCA · NC_028533.1 · 28,297–28,367 bp · +
petN · NC_028533.1 · 29,079–29,168 bp · +
trnT-GGU · NC_028533.1 · 31,814–31,885 bp · +
psbD · NC_028533.1 · 33,187–34,248 bp · +
psbC · NC_028533.1 · 34,196–35,617 bp · +
psbZ · NC_028533.1 · 36,265–36,453 bp · +
trnG-GCC · NC_028533.1 · 36,725–36,795 bp · +
trnS-GGA · NC_028533.1 · 45,549–45,635 bp · +
trnL-UAA · NC_028533.1 · 47,619–48,180 bp · +
trnF-GAA · NC_028533.1 · 48,480–48,552 bp · +
trnM-CAU · NC_028533.1 · 52,557–52,629 bp · +
rbcL · NC_028533.1 · 55,502–56,941 bp · +
accD · NC_028533.1 · 57,656–59,122 bp · +
psaI · NC_028533.1 · 59,680–59,790 bp · +
ycf4 · NC_028533.1 · 60,224–60,778 bp · +
cemA · NC_028533.1 · 61,427–62,116 bp · +
petA · NC_028533.1 · 62,323–63,285 bp · +
petL · NC_028533.1 · 66,017–66,112 bp · +
petG · NC_028533.1 · 66,288–66,401 bp · +
psaJ · NC_028533.1 · 67,109–67,243 bp · +
rpl33 · NC_028533.1 · 67,717–67,917 bp · +
rps18 · NC_028533.1 · 68,102–68,407 bp · +
rps12 · NC_028533.1 · 137,876–138,118 bp · +
psbB · NC_028533.1 · 72,478–74,004 bp · +
psbT · NC_028533.1 · 74,196–74,297 bp · +
psbH · NC_028533.1 · 74,606–74,827 bp · +
petB · NC_028533.1 · 74,952–76,320 bp · +
petD · NC_028533.1 · 76,509–77,710 bp · +
ycf2 · NC_028533.1 · 86,113–92,928 bp · +
ycf15 · NC_028533.1 · 93,019–93,267 bp · +
trnV-GAC · NC_028533.1 · 99,513–99,584 bp · +
rrn16 · NC_028533.1 · 99,812–101,302 bp · +
trnI-GAU · NC_028533.1 · 101,601–102,620 bp · +
trnA-UGC · NC_028533.1 · 102,686–103,569 bp · +
rrn23 · NC_028533.1 · 103,739–106,549 bp · +
rrn4.5 · NC_028533.1 · 106,648–106,750 bp · +
rrn5 · NC_028533.1 · 106,998–107,118 bp · +
trnR-ACG · NC_028533.1 · 107,353–107,426 bp · +
trnN-GUU · NC_028533.1 · 107,973–108,044 bp · +
ycf1 · NC_028533.1 · 108,374–109,156 bp · +
rpl32 · NC_028533.1 · 111,882–112,058 bp · +
trnL-UAG · NC_028533.1 · 112,497–112,576 bp · +
ccsA · NC_028533.1 · 112,672–113,646 bp · +
trnN-GUU · NC_028533.1 · 127,778–127,849 bp · +
rps7 · NC_028533.1 · 138,723–139,190 bp · +
ndhB · NC_028533.1 · 139,465–141,676 bp · +
trnL-CAA · NC_028533.1 · 142,219–142,299 bp · +
trnI-CAU · NC_028533.1 · 149,798–149,871 bp · +
rpl23 · NC_028533.1 · 150,031–150,312 bp · +
rpl2 · NC_028533.1 · 150,331–151,813 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria insignis
ANNOTATED PLASTOME
NC_028533.1
151,908 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 37977 75954 113931 151908 bp
Forward strand 5′ → 3′
psbK psbI trnG-CGA trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG trnN-GUU ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUC trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UCA trnfM-GAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB pabJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rps36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-GAU trnL-CAA ndhB rps7 rps12 ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACC rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 370 1428 1059 Locate
trnK-UUU gene − 1674 4246 2573 Locate
matK gene − 1957 3492 1536 Locate
rps16 gene − 5123 6286 1164 Locate
trnQ-UUC gene − 7301 7372 72 Locate
psbK gene + 7697 7882 186 Locate
psbI gene + 8273 8383 111 Locate
trnS-GCU gene − 8501 8588 88 Locate
trnG-CGA gene + 9150 9910 761 Locate
trnR-UCU gene + 10081 10152 72 Locate
atpA gene − 10249 11772 1524 Locate
atpF gene − 11855 13082 1228 Locate
atpH gene − 13441 13686 246 Locate
atpI gene − 14682 15425 744 Locate
rps2 gene − 15773 16483 711 Locate
rpoC2 gene − 16700 20905 4206 Locate
rpoC1 gene − 21060 23889 2830 Locate
rpoB gene − 23916 27128 3213 Locate
trnC-GCA gene + 28297 28367 71 Locate
petN gene + 29079 29168 90 Locate
psbM gene − 30205 30309 105 Locate
trnD-GUC gene − 30836 30909 74 Locate
trnY-GUA gene − 31023 31106 84 Locate
trnE-UUC gene − 31166 31238 73 Locate
trnT-GGU gene + 31814 31885 72 Locate
psbD gene + 33187 34248 1062 Locate
psbC gene + 34196 35617 1422 Locate
trnS-UCA gene − 35853 35945 93 Locate
psbZ gene + 36265 36453 189 Locate
trnG-GCC gene + 36725 36795 71 Locate
trnfM-GAU gene − 36941 37014 74 Locate
rps14 gene − 37164 37466 303 Locate
psaB gene − 37594 39798 2205 Locate
psaA gene − 39824 42076 2253 Locate
ycf3 gene − 42759 44673 1915 Locate
trnS-GGA gene + 45549 45635 87 Locate
rps4 gene − 45913 46518 606 Locate
trnT-UGU gene − 46861 46933 73 Locate
trnL-UAA gene + 47619 48180 562 Locate
trnF-GAA gene + 48480 48552 73 Locate
ndhJ gene − 49201 49677 477 Locate
ndhK gene − 49785 50462 678 Locate
ndhC gene − 50515 50877 363 Locate
trnV-UAC gene − 51724 52376 653 Locate
trnM-CAU gene + 52557 52629 73 Locate
atpE gene − 52845 53246 402 Locate
atpB gene − 53243 54730 1488 Locate
rbcL gene + 55502 56941 1440 Locate
accD gene + 57656 59122 1467 Locate
psaI gene + 59680 59790 111 Locate
ycf4 gene + 60224 60778 555 Locate
cemA gene + 61427 62116 690 Locate
petA gene + 62323 63285 963 Locate
pabJ gene − 64326 64448 123 Locate
psbL gene − 64582 64698 117 Locate
psbF gene − 64722 64841 120 Locate
psbE gene − 64856 65107 252 Locate
petL gene + 66017 66112 96 Locate
petG gene + 66288 66401 114 Locate
trnW-CCA gene − 66520 66593 74 Locate
trnP-UGG gene − 66763 66836 74 Locate
psaJ gene + 67109 67243 135 Locate
rpl33 gene + 67717 67917 201 Locate
rps18 gene + 68102 68407 306 Locate
rpl20 gene − 68645 69031 387 Locate
rps12 gene − 69832 69945 114 Locate
clpP gene − 70088 72011 1924 Locate
psbB gene + 72478 74004 1527 Locate
psbT gene + 74196 74297 102 Locate
psbN gene − 74371 74502 132 Locate
psbH gene + 74606 74827 222 Locate
petB gene + 74952 76320 1369 Locate
petD gene + 76509 77710 1202 Locate
rpoA gene − 77873 78886 1014 Locate
rps11 gene − 78958 79374 417 Locate
rps36 gene − 79476 79589 114 Locate
infA gene − 79685 79918 234 Locate
rps8 gene − 80038 80448 411 Locate
rpl14 gene − 80620 80988 369 Locate
rpl16 gene − 81115 82341 1227 Locate
rps3 gene − 82496 83158 663 Locate
rpl22 gene − 83160 83615 456 Locate
rps19 gene − 83676 83954 279 Locate
rpl2 gene − 84009 85491 1483 Locate
rpl23 gene − 85510 85791 282 Locate
trnI-GAU gene − 85951 86024 74 Locate
ycf2 gene + 86113 92928 6816 Locate
ycf15 gene + 93019 93267 249 Locate
trnL-CAA gene − 93523 93603 81 Locate
ndhB gene − 94146 96357 2212 Locate
rps7 gene − 96632 97099 468 Locate
rps12 gene − 97704 97946 243 Locate
trnV-GAC gene + 99513 99584 72 Locate
rrn16 gene + 99812 101302 1491 Locate
trnI-GAU gene + 101601 102620 1020 Locate
trnA-UGC gene + 102686 103569 884 Locate
rrn23 gene + 103739 106549 2811 Locate
rrn4.5 gene + 106648 106750 103 Locate
rrn5 gene + 106998 107118 121 Locate
trnR-ACG gene + 107353 107426 74 Locate
trnN-GUU gene + 107973 108044 72 Locate
ycf1 gene + 108374 109156 783 Locate
ndhF gene − 109121 111361 2241 Locate
rpl32 gene + 111882 112058 177 Locate
trnL-UAG gene + 112497 112576 80 Locate
ccsA gene + 112672 113646 975 Locate
ndhD gene − 113879 115384 1506 Locate
psaC gene − 115501 115746 246 Locate
ndhE gene − 116003 116308 306 Locate
ndhG gene − 116529 117059 531 Locate
ndhI gene − 117424 117924 501 Locate
ndhA gene − 118005 120095 2091 Locate
ndhH gene − 120097 121278 1182 Locate
rps15 gene − 121381 121653 273 Locate
ycf1 gene − 121920 127448 5529 Locate
trnN-GUU gene + 127778 127849 72 Locate
trnR-ACC gene − 128396 128469 74 Locate
rrn5 gene − 128704 128824 121 Locate
rrn4.5 gene − 129072 129174 103 Locate
rrn23 gene − 129273 132083 2811 Locate
trnA-UGC gene − 132253 133136 884 Locate
trnI-GAU gene − 133202 134221 1020 Locate
rrn16 gene − 134520 136010 1491 Locate
trnV-GAC gene − 136238 136309 72 Locate
rps12 gene + 137876 138118 243 Locate
rps7 gene + 138723 139190 468 Locate
ndhB gene + 139465 141676 2212 Locate
trnL-CAA gene + 142219 142299 81 Locate
ycf15 gene − 142555 142803 249 Locate
ycf2 gene − 142894 149709 6816 Locate
trnI-CAU gene + 149798 149871 74 Locate
rpl23 gene + 150031 150312 282 Locate
rpl2 gene + 150331 151813 1483 Locate
Status Available
Accession NC_028533.1
Length 151,908 bp
GC content 38.4%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 14 Other 16 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 0
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources