Coordinate-aware organelle record

Scutellaria insignis chloroplast genome

Available NC_028533.1 151,908 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	369	1428	1059
trnK-UUU	gene	translation-rna	−	1673	4246	2573
matK	gene	other	−	1956	3492	1536
rps16	gene	ribosomal-protein	−	5122	6286	1164
trnQ-UUC	gene	translation-rna	−	7300	7372	72
psbK	gene	photosystem-ii	+	7696	7882	186
psbI	gene	photosystem-ii	+	8272	8383	111
trnS-GCU	gene	translation-rna	−	8500	8588	88
trnG-CGA	gene	translation-rna	+	9149	9910	761
trnR-UCU	gene	translation-rna	+	10080	10152	72
atpA	gene	atp-synthase	−	10248	11772	1524
atpF	gene	atp-synthase	−	11854	13082	1228
atpH	gene	atp-synthase	−	13440	13686	246
atpI	gene	atp-synthase	−	14681	15425	744
rps2	gene	ribosomal-protein	−	15772	16483	711
rpoC2	gene	rna-polymerase	−	16699	20905	4206
rpoC1	gene	rna-polymerase	−	21059	23889	2830
rpoB	gene	rna-polymerase	−	23915	27128	3213
trnC-GCA	gene	translation-rna	+	28296	28367	71
petN	gene	cytochrome	+	29078	29168	90
psbM	gene	photosystem-ii	−	30204	30309	105
trnD-GUC	gene	translation-rna	−	30835	30909	74
trnY-GUA	gene	translation-rna	−	31022	31106	84
trnE-UUC	gene	translation-rna	−	31165	31238	73
trnT-GGU	gene	translation-rna	+	31813	31885	72
psbD	gene	photosystem-ii	+	33186	34248	1062
psbC	gene	photosystem-ii	+	34195	35617	1422
trnS-UCA	gene	translation-rna	−	35852	35945	93
psbZ	gene	photosystem-ii	+	36264	36453	189
trnG-GCC	gene	translation-rna	+	36724	36795	71
trnfM-GAU	gene	translation-rna	−	36940	37014	74
rps14	gene	ribosomal-protein	−	37163	37466	303
psaB	gene	photosystem-i	−	37593	39798	2205
psaA	gene	photosystem-i	−	39823	42076	2253
ycf3	gene	other	−	42758	44673	1915
trnS-GGA	gene	translation-rna	+	45548	45635	87
rps4	gene	ribosomal-protein	−	45912	46518	606
trnT-UGU	gene	translation-rna	−	46860	46933	73
trnL-UAA	gene	translation-rna	+	47618	48180	562
trnF-GAA	gene	translation-rna	+	48479	48552	73
ndhJ	gene	nad-dehydrogenase	−	49200	49677	477
ndhK	gene	nad-dehydrogenase	−	49784	50462	678
ndhC	gene	nad-dehydrogenase	−	50514	50877	363
trnV-UAC	gene	translation-rna	−	51723	52376	653
trnM-CAU	gene	translation-rna	+	52556	52629	73
atpE	gene	atp-synthase	−	52844	53246	402
atpB	gene	atp-synthase	−	53242	54730	1488
rbcL	gene	other	+	55501	56941	1440
accD	gene	other	+	57655	59122	1467
psaI	gene	photosystem-i	+	59679	59790	111
ycf4	gene	other	+	60223	60778	555
cemA	gene	other	+	61426	62116	690
petA	gene	cytochrome	+	62322	63285	963
pabJ	gene	other	−	64325	64448	123
psbL	gene	photosystem-ii	−	64581	64698	117
psbF	gene	photosystem-ii	−	64721	64841	120
psbE	gene	photosystem-ii	−	64855	65107	252
petL	gene	cytochrome	+	66016	66112	96
petG	gene	cytochrome	+	66287	66401	114
trnW-CCA	gene	translation-rna	−	66519	66593	74
trnP-UGG	gene	translation-rna	−	66762	66836	74
psaJ	gene	photosystem-i	+	67108	67243	135
rpl33	gene	ribosomal-protein	+	67716	67917	201
rps18	gene	ribosomal-protein	+	68101	68407	306
rpl20	gene	ribosomal-protein	−	68644	69031	387
rps12	gene	ribosomal-protein	−	69831	97946	28115
rps12	gene	ribosomal-protein	+	69831	138118	68287
clpP	gene	other	−	70087	72011	1924
psbB	gene	photosystem-ii	+	72477	74004	1527
psbT	gene	photosystem-ii	+	74195	74297	102
psbN	gene	photosystem-ii	−	74370	74502	132
psbH	gene	photosystem-ii	+	74605	74827	222
petB	gene	cytochrome	+	74951	76320	1369
petD	gene	cytochrome	+	76508	77710	1202
rpoA	gene	rna-polymerase	−	77872	78886	1014
rps11	gene	ribosomal-protein	−	78957	79374	417
rps36	gene	ribosomal-protein	−	79475	79589	114
infA	gene	other	−	79684	79918	234
rps8	gene	ribosomal-protein	−	80037	80448	411
rpl14	gene	ribosomal-protein	−	80619	80988	369
rpl16	gene	ribosomal-protein	−	81114	82341	1227
rps3	gene	ribosomal-protein	−	82495	83158	663
rpl22	gene	ribosomal-protein	−	83159	83615	456
rps19	gene	ribosomal-protein	−	83675	83954	279
rpl2	gene	ribosomal-protein	−	84008	85491	1483
rpl23	gene	ribosomal-protein	−	85509	85791	282
trnI-GAU	gene	translation-rna	−	85950	86024	74
ycf2	gene	other	+	86112	92928	6816
ycf15	gene	other	+	93018	93267	249
trnL-CAA	gene	translation-rna	−	93522	93603	81
ndhB	gene	nad-dehydrogenase	−	94145	96357	2212
rps7	gene	ribosomal-protein	−	96631	97099	468
trnV-GAC	gene	translation-rna	+	99512	99584	72
rrn16	gene	ribosomal-rna	+	99811	101302	1491
trnI-GAU	gene	translation-rna	+	101600	102620	1020
trnA-UGC	gene	translation-rna	+	102685	103569	884
rrn23	gene	ribosomal-rna	+	103738	106549	2811
rrn4.5	gene	ribosomal-rna	+	106647	106750	103
rrn5	gene	ribosomal-rna	+	106997	107118	121
trnR-ACG	gene	translation-rna	+	107352	107426	74
trnN-GUU	gene	translation-rna	+	107972	108044	72
ycf1	gene	other	+	108373	109156	783
ndhF	gene	nad-dehydrogenase	−	109120	111361	2241
rpl32	gene	ribosomal-protein	+	111881	112058	177
trnL-UAG	gene	translation-rna	+	112496	112576	80
ccsA	gene	other	+	112671	113646	975
ndhD	gene	nad-dehydrogenase	−	113878	115384	1506
psaC	gene	photosystem-i	−	115500	115746	246
ndhE	gene	nad-dehydrogenase	−	116002	116308	306
ndhG	gene	nad-dehydrogenase	−	116528	117059	531
ndhI	gene	nad-dehydrogenase	−	117423	117924	501
ndhA	gene	nad-dehydrogenase	−	118004	120095	2091
ndhH	gene	nad-dehydrogenase	−	120096	121278	1182
rps15	gene	ribosomal-protein	−	121380	121653	273
ycf1	gene	other	−	121919	127448	5529
trnN-GUU	gene	translation-rna	+	127777	127849	72
trnR-ACC	gene	translation-rna	−	128395	128469	74
rrn5	gene	ribosomal-rna	−	128703	128824	121
rrn4.5	gene	ribosomal-rna	−	129071	129174	103
rrn23	gene	ribosomal-rna	−	129272	132083	2811
trnA-UGC	gene	translation-rna	−	132252	133136	884
trnI-GAU	gene	translation-rna	−	133201	134221	1020
rrn16	gene	ribosomal-rna	−	134519	136010	1491
trnV-GAC	gene	translation-rna	−	136237	136309	72
rps7	gene	ribosomal-protein	+	138722	139190	468
ndhB	gene	nad-dehydrogenase	+	139464	141676	2212
trnL-CAA	gene	translation-rna	+	142218	142299	81
ycf15	gene	other	−	142554	142803	249
ycf2	gene	other	−	142893	149709	6816
trnI-CAU	gene	translation-rna	+	149797	149871	74
rpl23	gene	ribosomal-protein	+	150030	150312	282
rpl2	gene	ribosomal-protein	+	150330	151813	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_028533.1DNA · accDNC_028533DNA · atpBNC_028533DNA · matKNC_028533DNA · ndhFNC_028533DNA · psbANC_028533DNA · rbcLNC_028533DNA · rps12NC_028533DNA · ycf1NC_028533