Coordinate-aware organelle record

Scutellaria intermedia chloroplast genome

Available PZ130070.1 151,765 bp 133 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

133 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	3	77	74
psbA	gene	photosystem-ii	−	383	1442	1059
trnK-UUU	gene	translation-rna	−	1687	4261	2574
matK	gene	other	−	1973	3500	1527
rps16	gene	ribosomal-protein	−	5165	6324	1159
trnQ-UUC	gene	translation-rna	−	7068	7140	72
psbK	gene	photosystem-ii	+	7464	7650	186
psbI	gene	photosystem-ii	+	8039	8150	111
trnS-GCU	gene	translation-rna	−	8268	8356	88
trnG-CGA	gene	translation-rna	+	9054	9811	757
trnR-UCU	gene	translation-rna	+	9985	10057	72
atpA	gene	atp-synthase	−	10153	11677	1524
atpF	gene	atp-synthase	−	11758	12987	1229
atpH	gene	atp-synthase	−	13346	13592	246
atpI	gene	atp-synthase	−	14579	15323	744
rps2	gene	ribosomal-protein	−	15668	16379	711
rpoC2	gene	rna-polymerase	−	16593	20799	4206
rpoC1	gene	rna-polymerase	−	20953	23790	2837
rpoB	gene	rna-polymerase	−	23816	27029	3213
trnC-GCA	gene	translation-rna	+	28189	28260	71
petN	gene	cytochrome	+	28975	29065	90
psbM	gene	photosystem-ii	−	30055	30160	105
trnD-GUC	gene	translation-rna	−	30685	30759	74
trnY-GUA	gene	translation-rna	−	30872	30956	84
trnE-UUC	gene	translation-rna	−	31015	31088	73
trnT-GGU	gene	translation-rna	+	31663	31736	73
psbD	gene	photosystem-ii	+	33039	34101	1062
psbC	gene	photosystem-ii	+	34048	35470	1422
trnS-UCA	gene	translation-rna	−	35704	35797	93
psbZ	gene	photosystem-ii	+	36112	36301	189
trnG-GCC	gene	translation-rna	+	36576	36647	71
trnfM-GAU	gene	translation-rna	−	36797	36871	74
rps14	gene	ribosomal-protein	−	37025	37328	303
psaB	gene	photosystem-i	−	37457	39662	2205
psaA	gene	photosystem-i	−	39687	41940	2253
ycf3	gene	other	−	42649	44570	1921
trnS-GGA	gene	translation-rna	+	45452	45539	87
rps4	gene	ribosomal-protein	−	45814	46420	606
trnT-UGU	gene	translation-rna	−	46759	46832	73
trnL-UAA	gene	translation-rna	+	47503	48064	561
trnF-GAA	gene	translation-rna	+	48363	48436	73
ndhJ	gene	nad-dehydrogenase	−	49087	49564	477
ndhK	gene	nad-dehydrogenase	−	49672	50350	678
ndhC	gene	nad-dehydrogenase	−	50403	50766	363
trnV-UAC	gene	translation-rna	−	51740	52393	653
trnM-CAU	gene	translation-rna	+	52581	52654	73
atpE	gene	atp-synthase	−	52847	53249	402
atpB	gene	atp-synthase	−	53245	54742	1497
rbcL	gene	other	+	55513	56956	1443
accD	gene	other	+	57669	59148	1479
psaI	gene	photosystem-i	+	59854	59965	111
ycf4	gene	other	+	60398	60953	555
cemA	gene	other	+	61701	62301	600
petA	gene	cytochrome	+	62507	63470	963
pabJ	gene	other	−	64477	64600	123
psbL	gene	photosystem-ii	−	64733	64850	117
psbF	gene	photosystem-ii	−	64873	64993	120
psbE	gene	photosystem-ii	−	65007	65259	252
petL	gene	cytochrome	+	66136	66232	96
petG	gene	cytochrome	+	66407	66521	114
trnW-CCA	gene	translation-rna	−	66639	66713	74
trnP-UGG	gene	translation-rna	−	66882	66956	74
psaJ	gene	photosystem-i	+	67227	67362	135
rpl33	gene	ribosomal-protein	+	67837	68038	201
rps18	gene	ribosomal-protein	+	68212	68518	306
rpl20	gene	ribosomal-protein	−	68752	69139	387
rps12	gene	ribosomal-protein	−	69933	97987	28054
rps12	gene	ribosomal-protein	+	69933	138533	68600
clpP	gene	other	−	70188	72117	1929
psbB	gene	photosystem-ii	+	72568	74095	1527
psbT	gene	photosystem-ii	+	74286	74394	108
psbN	gene	photosystem-ii	−	74454	74586	132
psbH	gene	photosystem-ii	+	74689	74911	222
petB	gene	cytochrome	+	75035	76405	1370
petD	gene	cytochrome	+	76587	77794	1207
rpoA	gene	rna-polymerase	−	78148	78949	801
rps11	gene	ribosomal-protein	−	79020	79437	417
rps36	gene	ribosomal-protein	−	79538	79652	114
infA	gene	other	−	79746	79980	234
rps8	gene	ribosomal-protein	−	80103	80514	411
rpl14	gene	ribosomal-protein	−	80665	81034	369
rpl16	gene	ribosomal-protein	−	81160	82394	1234
rps3	gene	ribosomal-protein	−	82549	83212	663
rpl22	gene	ribosomal-protein	−	83213	83669	456
rps19	gene	ribosomal-protein	−	83728	84007	279
rpl2	gene	ribosomal-protein	−	84061	85543	1482
rpl23	gene	ribosomal-protein	−	85561	85843	282
trnI-GAU	gene	translation-rna	−	86002	86076	74
ycf2	gene	other	+	86164	92965	6801
ycf15	gene	other	+	93106	93304	198
trnL-CAA	gene	translation-rna	−	93563	93644	81
ndhB	gene	nad-dehydrogenase	−	94186	96398	2212
rps7	gene	ribosomal-protein	−	96672	97140	468
trnV-GAC	gene	translation-rna	+	99555	99627	72
rrn16	gene	ribosomal-rna	+	99853	101344	1491
trnI-GAU	gene	translation-rna	+	101642	102661	1019
trnA-UGC	gene	translation-rna	+	102726	103613	887
rrn23	gene	ribosomal-rna	+	103782	106594	2812
rrn4.5	gene	ribosomal-rna	+	106692	106795	103
rrn5	gene	ribosomal-rna	+	107042	107163	121
trnR-ACG	gene	translation-rna	+	107397	107471	74
trnN-GUU	gene	translation-rna	−	108019	108091	72
ycf1	gene	other	+	108420	109275	855
ndhF	gene	nad-dehydrogenase	−	109147	111409	2262
rpl32	gene	ribosomal-protein	+	111736	111913	177
trnL-UAG	gene	translation-rna	+	112356	112436	80
ccsA	gene	other	+	112537	113512	975
ndhD	gene	nad-dehydrogenase	−	113769	115299	1530
psaC	gene	photosystem-i	−	115399	115645	246
ndhE	gene	nad-dehydrogenase	−	115900	116206	306
ndhG	gene	nad-dehydrogenase	−	116422	116953	531
ndhI	gene	nad-dehydrogenase	−	117323	117824	501
ndhA	gene	nad-dehydrogenase	−	117909	120031	2122
ndhH	gene	nad-dehydrogenase	−	120032	121214	1182
rps15	gene	ribosomal-protein	−	121310	121583	273
ycf1	gene	other	−	121780	127306	5526
trnN-GUU	gene	translation-rna	+	127635	127707	72
trnR-ACC	gene	translation-rna	−	128255	128329	74
rrn5	gene	ribosomal-rna	−	128563	128684	121
rrn4.5	gene	ribosomal-rna	−	128931	129034	103
rrn23	gene	ribosomal-rna	−	129132	131944	2812
trnA-UGC	gene	translation-rna	−	132113	133000	887
trnI-GAU	gene	translation-rna	−	133065	134084	1019
rrn16	gene	ribosomal-rna	−	134382	135873	1491
trnV-GAC	gene	translation-rna	−	136099	136171	72
rps7	gene	ribosomal-protein	+	138586	139054	468
ndhB	gene	nad-dehydrogenase	+	139328	141540	2212
trnL-CAA	gene	translation-rna	+	142082	142163	81
ycf15	gene	other	−	142422	142620	198
ycf2	gene	other	−	142761	149562	6801
trnI-CAU	gene	translation-rna	+	149650	149724	74
rpl23	gene	ribosomal-protein	+	149883	150165	282
rpl2	gene	ribosomal-protein	+	150183	151665	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomePZ130070.1DNA · accDPZ130070DNA · atpBPZ130070DNA · matKPZ130070DNA · ndhFPZ130070DNA · psbAPZ130070DNA · rbcLPZ130070DNA · rps12PZ130070DNA · ycf1PZ130070