Scutellaria mollifolia chloroplast
Biopython GenomeDiagram 1.79; GenBank local location segments.
IR
IR
trnH-GUG · MN128384.1 · 3–76 bp · −
psbA · MN128384.1 · 370–1,428 bp · −
trnK-UUU · MN128384.1 · 1,666–4,245 bp · −
matK · MN128384.1 · 1,957–3,492 bp · −
rps16 · MN128384.1 · 5,140–6,299 bp · −
trnQ-UUC · MN128384.1 · 7,383–7,454 bp · −
trnS-GCU · MN128384.1 · 8,583–8,670 bp · −
atpA · MN128384.1 · 10,475–11,998 bp · −
atpF · MN128384.1 · 12,081–13,308 bp · −
atpH · MN128384.1 · 13,666–13,911 bp · −
atpI · MN128384.1 · 14,907–15,650 bp · −
rps2 · MN128384.1 · 15,998–16,708 bp · −
rpoC2 · MN128384.1 · 16,925–21,130 bp · −
rpoC1 · MN128384.1 · 21,285–24,125 bp · −
rpoB · MN128384.1 · 24,152–27,364 bp · −
psbM · MN128384.1 · 30,392–30,505 bp · −
trnD-GUC · MN128384.1 · 31,032–31,105 bp · −
trnY-GUA · MN128384.1 · 31,219–31,302 bp · −
trnE-UUC · MN128384.1 · 31,362–31,434 bp · −
trnS-UCA · MN128384.1 · 36,060–36,152 bp · −
trnfM-GAU · MN128384.1 · 37,156–37,229 bp · −
rps14 · MN128384.1 · 37,379–37,681 bp · −
psaB · MN128384.1 · 37,809–40,013 bp · −
psaA · MN128384.1 · 40,039–42,291 bp · −
ycf3 · MN128384.1 · 42,956–44,878 bp · −
rps4 · MN128384.1 · 46,142–46,747 bp · −
trnT-UGU · MN128384.1 · 47,089–47,161 bp · −
ndhJ · MN128384.1 · 49,446–49,922 bp · −
ndhK · MN128384.1 · 50,030–50,707 bp · −
ndhC · MN128384.1 · 50,760–51,122 bp · −
trnV-UAC · MN128384.1 · 52,106–52,758 bp · −
atpE · MN128384.1 · 53,221–53,622 bp · −
atpB · MN128384.1 · 53,619–55,106 bp · −
pabJ · MN128384.1 · 64,820–64,942 bp · −
psbL · MN128384.1 · 65,076–65,192 bp · −
psbF · MN128384.1 · 65,216–65,335 bp · −
psbE · MN128384.1 · 65,350–65,601 bp · −
trnW-CCA · MN128384.1 · 67,000–67,073 bp · −
trnP-UGG · MN128384.1 · 67,243–67,316 bp · −
rpl20 · MN128384.1 · 69,124–69,510 bp · −
rps12 · MN128384.1 · 70,312–70,425 bp · −
rps12 · MN128384.1 · 97,651–98,444 bp · −
clpP · MN128384.1 · 70,580–72,511 bp · −
psbN · MN128384.1 · 74,878–75,009 bp · −
rpoA · MN128384.1 · 78,381–79,394 bp · −
rps11 · MN128384.1 · 79,466–79,882 bp · −
rps36 · MN128384.1 · 79,984–80,097 bp · −
infA · MN128384.1 · 80,193–80,426 bp · −
rps8 · MN128384.1 · 80,546–80,956 bp · −
rpl14 · MN128384.1 · 81,123–81,491 bp · −
rpl16 · MN128384.1 · 81,618–82,861 bp · −
rps3 · MN128384.1 · 83,016–83,678 bp · −
rpl22 · MN128384.1 · 83,680–84,135 bp · −
rps19 · MN128384.1 · 84,195–84,473 bp · −
rpl2 · MN128384.1 · 84,528–86,010 bp · −
rpl23 · MN128384.1 · 86,029–86,310 bp · −
trnI-GAU · MN128384.1 · 86,470–86,543 bp · −
trnL-CAA · MN128384.1 · 94,021–94,101 bp · −
ndhB · MN128384.1 · 94,644–96,855 bp · −
rps7 · MN128384.1 · 97,130–97,597 bp · −
trnN-GUU · MN128384.1 · 108,462–108,533 bp · −
ndhF · MN128384.1 · 109,610–111,850 bp · −
ndhD · MN128384.1 · 114,366–115,871 bp · −
psaC · MN128384.1 · 115,988–116,233 bp · −
ndhE · MN128384.1 · 116,490–116,795 bp · −
ndhG · MN128384.1 · 117,026–117,556 bp · −
ndhI · MN128384.1 · 117,921–118,421 bp · −
ndhA · MN128384.1 · 118,502–120,628 bp · −
ndhH · MN128384.1 · 120,630–121,811 bp · −
rps15 · MN128384.1 · 121,914–122,186 bp · −
ycf1 · MN128384.1 · 122,453–127,987 bp · −
trnR-ACC · MN128384.1 · 128,935–129,008 bp · −
rrn5 · MN128384.1 · 129,243–129,363 bp · −
rrn4.5 · MN128384.1 · 129,611–129,713 bp · −
rrn23 · MN128384.1 · 129,812–132,624 bp · −
trnA-UGC · MN128384.1 · 132,794–133,676 bp · −
trnI-GAU · MN128384.1 · 133,742–134,752 bp · −
rrn16 · MN128384.1 · 135,051–136,541 bp · −
trnV-GAC · MN128384.1 · 136,769–136,840 bp · −
ycf15 · MN128384.1 · 143,085–143,282 bp · −
ycf2 · MN128384.1 · 143,424–150,218 bp · −
psbK · MN128384.1 · 7,779–7,964 bp · +
psbI · MN128384.1 · 8,355–8,465 bp · +
trnG-CGA · MN128384.1 · 9,372–10,132 bp · +
trnR-UCU · MN128384.1 · 10,307–10,378 bp · +
trnC-GCA · MN128384.1 · 28,533–28,603 bp · +
petN · MN128384.1 · 29,314–29,403 bp · +
trnT-GGU · MN128384.1 · 32,011–32,082 bp · +
psbD · MN128384.1 · 33,394–34,455 bp · +
psbC · MN128384.1 · 34,403–35,824 bp · +
psbZ · MN128384.1 · 36,472–36,660 bp · +
trnG-GCC · MN128384.1 · 36,932–37,002 bp · +
trnS-GGA · MN128384.1 · 45,770–45,856 bp · +
trnL-UAA · MN128384.1 · 47,863–48,424 bp · +
trnF-GAA · MN128384.1 · 48,729–48,801 bp · +
trnM-CAU · MN128384.1 · 52,939–53,011 bp · +
rbcL · MN128384.1 · 55,879–57,321 bp · +
accD · MN128384.1 · 58,050–59,507 bp · +
psaI · MN128384.1 · 60,224–60,334 bp · +
ycf4 · MN128384.1 · 60,768–61,322 bp · +
cemA · MN128384.1 · 62,004–62,663 bp · +
petA · MN128384.1 · 62,870–63,832 bp · +
petL · MN128384.1 · 66,497–66,592 bp · +
petG · MN128384.1 · 66,768–66,881 bp · +
psaJ · MN128384.1 · 67,589–67,723 bp · +
rpl33 · MN128384.1 · 68,201–68,401 bp · +
rps18 · MN128384.1 · 68,581–68,886 bp · +
rps12 · MN128384.1 · 138,406–139,199 bp · +
psbB · MN128384.1 · 72,985–74,511 bp · +
psbT · MN128384.1 · 74,703–74,804 bp · +
psbH · MN128384.1 · 75,113–75,334 bp · +
petB · MN128384.1 · 75,459–76,828 bp · +
petD · MN128384.1 · 77,017–78,218 bp · +
ycf2 · MN128384.1 · 86,632–93,426 bp · +
ycf15 · MN128384.1 · 93,568–93,765 bp · +
trnV-GAC · MN128384.1 · 100,010–100,081 bp · +
rrn16 · MN128384.1 · 100,309–101,799 bp · +
trnI-GAU · MN128384.1 · 102,098–103,108 bp · +
trnA-UGC · MN128384.1 · 103,174–104,056 bp · +
rrn23 · MN128384.1 · 104,226–107,038 bp · +
rrn4.5 · MN128384.1 · 107,137–107,239 bp · +
rrn5 · MN128384.1 · 107,487–107,607 bp · +
trnR-ACG · MN128384.1 · 107,842–107,915 bp · +
ycf1 · MN128384.1 · 108,863–109,645 bp · +
rpl32 · MN128384.1 · 112,372–112,548 bp · +
trnL-UAG · MN128384.1 · 112,996–113,075 bp · +
ccsA · MN128384.1 · 113,159–114,133 bp · +
trnN-GUU · MN128384.1 · 128,317–128,388 bp · +
rps7 · MN128384.1 · 139,253–139,720 bp · +
ndhB · MN128384.1 · 139,995–142,206 bp · +
trnL-CAA · MN128384.1 · 142,749–142,829 bp · +
trnI-CAU · MN128384.1 · 150,307–150,380 bp · +
rpl23 · MN128384.1 · 150,540–150,821 bp · +
rpl2 · MN128384.1 · 150,840–152,322 bp · +
0 kb
13 kb
26 kb
39 kb
52 kb
65 kb
78 kb
91 kb
104 kb
117 kb
130 kb
143 kb
Scutellaria mollifolia
ANNOTATED PLASTOME
MN128384.1
152,417 bp · 133 genes
Gene function
Transfer RNA
Photosystem II
Other
Ribosomal protein
ATP synthase
RNA polymerase
Cytochrome
Photosystem I
NADH dehydrogenase
Ribosomal RNA
0 38104 76208 114313 152417 bp
Forward strand 5′ → 3′
psbK psbI trnG-CGA trnR-UCU trnC-GCA petN trnT-GGU psbD psbC psbZ trnG-GCC trnS-GGA trnL-UAA trnF-GAA trnM-CAU rbcL accD psaI ycf4 cemA petA petL petG psaJ rpl33 rps18 psbB psbT psbH petB petD ycf2 ycf15 trnV-GAC rrn16 trnI-GAU trnA-UGC rrn23 rrn4.5 rrn5 trnR-ACG ycf1 rpl32 trnL-UAG ccsA trnN-GUU rps12 rps7 ndhB trnL-CAA trnI-CAU rpl23 rpl2
trnH-GUG psbA trnK-UUU matK rps16 trnQ-UUC trnS-GCU atpA atpF atpH atpI rps2 rpoC2 rpoC1 rpoB psbM trnD-GUC trnY-GUA trnE-UUC trnS-UCA trnfM-GAU rps14 psaB psaA ycf3 rps4 trnT-UGU ndhJ ndhK ndhC trnV-UAC atpE atpB pabJ psbL psbF psbE trnW-CCA trnP-UGG rpl20 rps12 clpP psbN rpoA rps11 rps36 infA rps8 rpl14 rpl16 rps3 rpl22 rps19 rpl2 rpl23 trnI-GAU trnL-CAA ndhB rps7 rps12 trnN-GUU ndhF ndhD psaC ndhE ndhG ndhI ndhA ndhH rps15 ycf1 trnR-ACC rrn5 rrn4.5 rrn23 trnA-UGC trnI-GAU rrn16 trnV-GAC ycf15 ycf2
Reverse strand 3′ ← 5′
Outer ring: forward strand; inner ring: reverse strand. The innermost ring shows overall GC percentage. GenBank gene locations may include introns; discontinuous parts are drawn separately. Hover for coordinates; click a segment to open its gene page. Biopython GenomeDiagram .
Gene-position browser Map and table selections are linked. Each row is one local segment; coordinates are 1-based and inclusive.
134 local segments
Gene Type Group Strand Start End Length
trnH-GUG gene − 3 76 74 Locate
psbA gene − 370 1428 1059 Locate
trnK-UUU gene − 1666 4245 2580 Locate
matK gene − 1957 3492 1536 Locate
rps16 gene − 5140 6299 1160 Locate
trnQ-UUC gene − 7383 7454 72 Locate
psbK gene + 7779 7964 186 Locate
psbI gene + 8355 8465 111 Locate
trnS-GCU gene − 8583 8670 88 Locate
trnG-CGA gene + 9372 10132 761 Locate
trnR-UCU gene + 10307 10378 72 Locate
atpA gene − 10475 11998 1524 Locate
atpF gene − 12081 13308 1228 Locate
atpH gene − 13666 13911 246 Locate
atpI gene − 14907 15650 744 Locate
rps2 gene − 15998 16708 711 Locate
rpoC2 gene − 16925 21130 4206 Locate
rpoC1 gene − 21285 24125 2841 Locate
rpoB gene − 24152 27364 3213 Locate
trnC-GCA gene + 28533 28603 71 Locate
petN gene + 29314 29403 90 Locate
psbM gene − 30392 30505 114 Locate
trnD-GUC gene − 31032 31105 74 Locate
trnY-GUA gene − 31219 31302 84 Locate
trnE-UUC gene − 31362 31434 73 Locate
trnT-GGU gene + 32011 32082 72 Locate
psbD gene + 33394 34455 1062 Locate
psbC gene + 34403 35824 1422 Locate
trnS-UCA gene − 36060 36152 93 Locate
psbZ gene + 36472 36660 189 Locate
trnG-GCC gene + 36932 37002 71 Locate
trnfM-GAU gene − 37156 37229 74 Locate
rps14 gene − 37379 37681 303 Locate
psaB gene − 37809 40013 2205 Locate
psaA gene − 40039 42291 2253 Locate
ycf3 gene − 42956 44878 1923 Locate
trnS-GGA gene + 45770 45856 87 Locate
rps4 gene − 46142 46747 606 Locate
trnT-UGU gene − 47089 47161 73 Locate
trnL-UAA gene + 47863 48424 562 Locate
trnF-GAA gene + 48729 48801 73 Locate
ndhJ gene − 49446 49922 477 Locate
ndhK gene − 50030 50707 678 Locate
ndhC gene − 50760 51122 363 Locate
trnV-UAC gene − 52106 52758 653 Locate
trnM-CAU gene + 52939 53011 73 Locate
atpE gene − 53221 53622 402 Locate
atpB gene − 53619 55106 1488 Locate
rbcL gene + 55879 57321 1443 Locate
accD gene + 58050 59507 1458 Locate
psaI gene + 60224 60334 111 Locate
ycf4 gene + 60768 61322 555 Locate
cemA gene + 62004 62663 660 Locate
petA gene + 62870 63832 963 Locate
pabJ gene − 64820 64942 123 Locate
psbL gene − 65076 65192 117 Locate
psbF gene − 65216 65335 120 Locate
psbE gene − 65350 65601 252 Locate
petL gene + 66497 66592 96 Locate
petG gene + 66768 66881 114 Locate
trnW-CCA gene − 67000 67073 74 Locate
trnP-UGG gene − 67243 67316 74 Locate
psaJ gene + 67589 67723 135 Locate
rpl33 gene + 68201 68401 201 Locate
rps18 gene + 68581 68886 306 Locate
rpl20 gene − 69124 69510 387 Locate
rps12 gene − 70312 70425 114 Locate
clpP gene − 70580 72511 1932 Locate
psbB gene + 72985 74511 1527 Locate
psbT gene + 74703 74804 102 Locate
psbN gene − 74878 75009 132 Locate
psbH gene + 75113 75334 222 Locate
petB gene + 75459 76828 1370 Locate
petD gene + 77017 78218 1202 Locate
rpoA gene − 78381 79394 1014 Locate
rps11 gene − 79466 79882 417 Locate
rps36 gene − 79984 80097 114 Locate
infA gene − 80193 80426 234 Locate
rps8 gene − 80546 80956 411 Locate
rpl14 gene − 81123 81491 369 Locate
rpl16 gene − 81618 82861 1244 Locate
rps3 gene − 83016 83678 663 Locate
rpl22 gene − 83680 84135 456 Locate
rps19 gene − 84195 84473 279 Locate
rpl2 gene − 84528 86010 1483 Locate
rpl23 gene − 86029 86310 282 Locate
trnI-GAU gene − 86470 86543 74 Locate
ycf2 gene + 86632 93426 6795 Locate
ycf15 gene + 93568 93765 198 Locate
trnL-CAA gene − 94021 94101 81 Locate
ndhB gene − 94644 96855 2212 Locate
rps7 gene − 97130 97597 468 Locate
rps12 gene − 97651 98444 794 Locate
trnV-GAC gene + 100010 100081 72 Locate
rrn16 gene + 100309 101799 1491 Locate
trnI-GAU gene + 102098 103108 1011 Locate
trnA-UGC gene + 103174 104056 883 Locate
rrn23 gene + 104226 107038 2813 Locate
rrn4.5 gene + 107137 107239 103 Locate
rrn5 gene + 107487 107607 121 Locate
trnR-ACG gene + 107842 107915 74 Locate
trnN-GUU gene − 108462 108533 72 Locate
ycf1 gene + 108863 109645 783 Locate
ndhF gene − 109610 111850 2241 Locate
rpl32 gene + 112372 112548 177 Locate
trnL-UAG gene + 112996 113075 80 Locate
ccsA gene + 113159 114133 975 Locate
ndhD gene − 114366 115871 1506 Locate
psaC gene − 115988 116233 246 Locate
ndhE gene − 116490 116795 306 Locate
ndhG gene − 117026 117556 531 Locate
ndhI gene − 117921 118421 501 Locate
ndhA gene − 118502 120628 2127 Locate
ndhH gene − 120630 121811 1182 Locate
rps15 gene − 121914 122186 273 Locate
ycf1 gene − 122453 127987 5535 Locate
trnN-GUU gene + 128317 128388 72 Locate
trnR-ACC gene − 128935 129008 74 Locate
rrn5 gene − 129243 129363 121 Locate
rrn4.5 gene − 129611 129713 103 Locate
rrn23 gene − 129812 132624 2813 Locate
trnA-UGC gene − 132794 133676 883 Locate
trnI-GAU gene − 133742 134752 1011 Locate
rrn16 gene − 135051 136541 1491 Locate
trnV-GAC gene − 136769 136840 72 Locate
rps12 gene + 138406 139199 794 Locate
rps7 gene + 139253 139720 468 Locate
ndhB gene + 139995 142206 2212 Locate
trnL-CAA gene + 142749 142829 81 Locate
ycf15 gene − 143085 143282 198 Locate
ycf2 gene − 143424 150218 6795 Locate
trnI-CAU gene + 150307 150380 74 Locate
rpl23 gene + 150540 150821 282 Locate
rpl2 gene + 150840 152322 1483 Locate
Status Available
Accession MN128384.1
Length 152,417 bp
GC content 38.3%
Annotated genes 133
Gene sequence records 8
Translation Rna 37 Photosystem Ii 14 Other 16 Ribosomal Protein 26 Atp Synthase 6 Rna Polymerase 4 Cytochrome 6 Photosystem I 5 Nad Dehydrogenase 12 Ribosomal Rna 8
SSR 0
Direct 0
Inverted 2
Palindromic 0
Sources and evidence boundary Accessions, release scope and coordinate evidence remain visible beside the visualization.
Full species sources