Coordinate-aware organelle record

Scutellaria scordifolia chloroplast genome

Available NC_052883.1 152,366 bp 134 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

134 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	2	76	74
psbA	gene	photosystem-ii	−	379	1438	1059
trnK-UUU	gene	translation-rna	−	1674	4254	2580
matK	gene	other	−	1965	3501	1536
rps16	gene	ribosomal-protein	−	5162	6331	1169
trnQ-UUC	gene	translation-rna	−	7461	7533	72
psbK	gene	photosystem-ii	+	7857	8043	186
psbI	gene	photosystem-ii	+	8434	8545	111
trnS-GCU	gene	translation-rna	−	8654	8742	88
trnG-CGA	gene	translation-rna	+	9429	10189	760
trnR-UCU	gene	translation-rna	+	10363	10435	72
atpA	gene	atp-synthase	−	10531	12055	1524
atpF	gene	atp-synthase	−	12128	13356	1228
atpH	gene	atp-synthase	−	13723	13969	246
atpI	gene	atp-synthase	−	14965	15709	744
rps2	gene	ribosomal-protein	−	16057	16768	711
rpoC2	gene	rna-polymerase	−	16983	21189	4206
rpoC1	gene	rna-polymerase	−	21343	24180	2837
rpoB	gene	rna-polymerase	−	24206	27419	3213
trnC-GCA	gene	translation-rna	+	28582	28653	71
petN	gene	cytochrome	+	29363	29453	90
psbM	gene	photosystem-ii	−	30480	30585	105
trnD-GUC	gene	translation-rna	−	31110	31184	74
trnY-GUA	gene	translation-rna	−	31297	31381	84
trnE-UUC	gene	translation-rna	−	31440	31513	73
trnT-GGU	gene	translation-rna	+	32095	32167	72
psbD	gene	photosystem-ii	+	33463	34525	1062
psbC	gene	photosystem-ii	+	34472	35894	1422
trnS-UCA	gene	translation-rna	−	36136	36229	93
psbZ	gene	photosystem-ii	+	36548	36737	189
trnG-GCC	gene	translation-rna	+	37008	37079	71
trnfM-GAU	gene	translation-rna	−	37224	37298	74
rps14	gene	ribosomal-protein	−	37447	37750	303
psaB	gene	photosystem-i	−	37877	40082	2205
psaA	gene	photosystem-i	−	40107	42360	2253
ycf3	gene	other	−	43037	44960	1923
trnS-GGA	gene	translation-rna	+	45847	45934	87
rps4	gene	ribosomal-protein	−	46219	46825	606
trnT-UGU	gene	translation-rna	−	47163	47236	73
trnL-UAA	gene	translation-rna	+	47921	48491	570
trnF-GAA	gene	translation-rna	+	48796	48869	73
ndhJ	gene	nad-dehydrogenase	−	49517	49994	477
ndhK	gene	nad-dehydrogenase	−	50101	50779	678
ndhC	gene	nad-dehydrogenase	−	50831	51194	363
trnV-UAC	gene	translation-rna	−	52190	52843	653
trnM-CAU	gene	translation-rna	+	53023	53096	73
atpE	gene	atp-synthase	−	53305	53707	402
atpB	gene	atp-synthase	−	53703	55191	1488
rbcL	CDS	other	+	55963	57406	1443
rbcL	gene	other	+	55963	57410	1447
accD	gene	other	+	58116	59583	1467
psaI	gene	photosystem-i	+	60154	60265	111
ycf4	gene	other	+	60698	61253	555
cemA	gene	other	+	61912	62601	689
petA	gene	cytochrome	+	62807	63770	963
pabJ	gene	other	−	64787	64910	123
psbL	gene	photosystem-ii	−	65043	65160	117
psbF	gene	photosystem-ii	−	65183	65303	120
psbE	gene	photosystem-ii	−	65317	65569	252
petL	gene	cytochrome	+	66476	66572	96
petG	gene	cytochrome	+	66746	66860	114
trnW-CCA	gene	translation-rna	−	66978	67052	74
trnP-UGG	gene	translation-rna	−	67221	67295	74
psaJ	gene	photosystem-i	+	67566	67701	135
rpl33	gene	ribosomal-protein	+	68172	68373	201
rps18	gene	ribosomal-protein	+	68547	68853	306
rpl20	gene	ribosomal-protein	−	69090	69477	387
rps12	gene	ribosomal-protein	−	70276	98399	28123
rps12	gene	ribosomal-protein	+	70276	138616	68340
clpP	gene	other	−	70532	72467	1935
psbB	gene	photosystem-ii	+	72936	74463	1527
psbT	gene	photosystem-ii	+	74654	74756	102
psbN	gene	photosystem-ii	−	74829	74961	132
psbH	gene	photosystem-ii	+	75064	75286	222
petB	gene	cytochrome	+	75410	76776	1366
petD	gene	cytochrome	+	76964	78166	1202
rpoA	gene	rna-polymerase	−	78328	79342	1014
rps11	gene	ribosomal-protein	−	79413	79830	417
rps36	gene	ribosomal-protein	−	79931	80045	114
infA	gene	other	−	80140	80374	234
rps8	gene	ribosomal-protein	−	80493	80904	411
rpl14	gene	ribosomal-protein	−	81062	81431	369
rpl16	gene	ribosomal-protein	−	81557	82801	1244
rps3	gene	ribosomal-protein	−	82955	83618	663
rpl22	gene	ribosomal-protein	−	83619	84075	456
rps19	gene	ribosomal-protein	−	84134	84413	279
rpl2	gene	ribosomal-protein	−	84467	85950	1483
rpl23	gene	ribosomal-protein	−	85968	86250	282
trnI-GAU	gene	translation-rna	−	86409	86483	74
ycf2	gene	other	+	86571	93381	6810
ycf15	gene	other	+	93471	93720	249
trnL-CAA	gene	translation-rna	−	93975	94056	81
ndhB	gene	nad-dehydrogenase	−	94598	96810	2212
rps7	gene	ribosomal-protein	−	97084	97552	468
trnV-GAC	gene	translation-rna	+	99973	100045	72
rrn16	gene	ribosomal-rna	+	100272	101763	1491
trnI-GAU	gene	translation-rna	+	102061	103081	1020
trnA-UGC	gene	translation-rna	+	103146	104031	885
rrn23	gene	ribosomal-rna	+	104200	107013	2813
rrn4.5	gene	ribosomal-rna	+	107111	107214	103
rrn5	gene	ribosomal-rna	+	107461	107582	121
trnR-ACG	gene	translation-rna	+	107816	107890	74
trnN-GUU	gene	translation-rna	+	108436	108508	72
ycf1	gene	other	+	108830	109613	783
ndhF	gene	nad-dehydrogenase	−	109577	111818	2241
rpl32	gene	ribosomal-protein	+	112334	112511	177
trnL-UAG	gene	translation-rna	+	112956	113036	80
ccsA	gene	other	+	113132	114107	975
ndhD	gene	nad-dehydrogenase	−	114339	115845	1506
psaC	gene	photosystem-i	−	115961	116207	246
ndhE	gene	nad-dehydrogenase	−	116468	116774	306
ndhG	gene	nad-dehydrogenase	−	116994	117525	531
ndhI	gene	nad-dehydrogenase	−	117888	118389	501
ndhA	gene	nad-dehydrogenase	−	118469	120569	2100
ndhH	gene	nad-dehydrogenase	−	120570	121752	1182
rps15	gene	ribosomal-protein	−	121854	122127	273
ycf1	gene	other	−	122397	127941	5544
trnN-GUU	gene	translation-rna	+	128263	128335	72
trnR-ACC	gene	translation-rna	−	128881	128955	74
rrn5	gene	ribosomal-rna	−	129189	129310	121
rrn4.5	gene	ribosomal-rna	−	129557	129660	103
rrn23	gene	ribosomal-rna	−	129758	132571	2813
trnA-UGC	gene	translation-rna	−	132740	133626	886
trnI-GAU	gene	translation-rna	−	133691	134711	1020
rrn16	gene	ribosomal-rna	−	135009	136500	1491
trnV-GAC	gene	translation-rna	−	136727	136799	72
rps7	gene	ribosomal-protein	+	139220	139688	468
ndhB	gene	nad-dehydrogenase	+	139962	142174	2212
trnL-CAA	gene	translation-rna	+	142716	142797	81
ycf15	gene	other	−	143052	143301	249
ycf2	gene	other	−	143391	150201	6810
trnI-CAU	gene	translation-rna	+	150289	150363	74
rpl23	gene	ribosomal-protein	+	150522	150804	282
rpl2	gene	ribosomal-protein	+	150822	152305	1483

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_052883.1DNA · accDNC_052883DNA · atpBNC_052883DNA · matKNC_052883DNA · ndhFNC_052883DNA · psbANC_052883DNA · rbcLNC_052883DNA · rps12NC_052883DNA · ycf1NC_052883