Coordinate-aware organelle record

Scutellaria viscidula chloroplast genome

Available MW286272.1 151,816 bp 130 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

130 features

Gene	Type	Group	Strand	Start	End	Length
psbM	gene	photosystem-ii	−	137	242	105
trnD-GUC	gene	translation-rna	−	768	842	74
trnY-GUA	gene	translation-rna	−	960	1044	84
trnE-UUC	gene	translation-rna	−	1103	1176	73
trnT-GGU	gene	translation-rna	+	1744	1816	72
psbD	gene	photosystem-ii	+	3132	4194	1062
psbC	gene	photosystem-ii	+	4141	5563	1422
trnS-UGA	gene	translation-rna	−	5796	5889	93
psbZ	gene	photosystem-ii	+	6205	6394	189
trnG-GCC	gene	translation-rna	+	6676	6747	71
trnM-CAU	gene	translation-rna	−	6896	6970	74
rps14	gene	ribosomal-protein	−	7119	7422	303
psaB	gene	photosystem-i	−	7550	9755	2205
psaA	gene	photosystem-i	−	9780	12033	2253
ycf3	gene	other	−	12721	14646	1925
trnS-GGA	gene	translation-rna	+	15539	15626	87
rps4	gene	ribosomal-protein	−	15907	16513	606
trnT-UGU	gene	translation-rna	−	16851	16924	73
trnL-UAA	gene	translation-rna	+	17614	18189	575
trnF-GAA	gene	translation-rna	+	18499	18572	73
ndhJ	gene	nad-dehydrogenase	−	19219	19696	477
ndhK	gene	nad-dehydrogenase	−	19804	20482	678
ndhC	gene	nad-dehydrogenase	−	20534	20897	363
trnM-CAU	gene	translation-rna	+	22681	22754	73
atpE	gene	atp-synthase	−	22962	23364	402
atpB	gene	atp-synthase	−	23360	24857	1497
rbcL	gene	other	+	25622	27065	1443
accD	gene	other	+	27780	29259	1479
psaI	gene	photosystem-i	+	29972	30083	111
ycf4	gene	other	+	30516	31071	555
cemA	gene	other	+	31813	32413	600
petA	gene	cytochrome	+	32614	33577	963
psbJ	gene	photosystem-ii	−	34585	34708	123
psbL	gene	photosystem-ii	−	34841	34958	117
psbF	gene	photosystem-ii	−	34981	35101	120
psbE	gene	photosystem-ii	−	35115	35367	252
petL	gene	cytochrome	+	36235	36331	96
petG	gene	cytochrome	+	36506	36620	114
trnW-CCA	gene	translation-rna	−	36738	36812	74
trnP-UGG	gene	translation-rna	−	36981	37055	74
psaJ	gene	photosystem-i	+	37325	37460	135
rpl33	gene	ribosomal-protein	+	37935	38136	201
rps18	gene	ribosomal-protein	+	38310	38616	306
rpl20	gene	ribosomal-protein	−	38849	39236	387
rps12	gene	ribosomal-protein	−	40034	68137	28103
rps12	gene	ribosomal-protein	+	40034	108139	68105
clpP	gene	other	−	40289	42230	1941
psbB	gene	photosystem-ii	+	42687	44214	1527
psbT	gene	photosystem-ii	+	44405	44513	108
psbN	gene	photosystem-ii	−	44573	44705	132
psbH	gene	photosystem-ii	+	44808	45030	222
petB	gene	cytochrome	+	45154	46524	1370
petD	gene	cytochrome	+	46712	47909	1197
rps11	gene	ribosomal-protein	−	49156	49573	417
rpl36	gene	ribosomal-protein	−	49674	49788	114
infA	gene	other	−	49882	50116	234
rps8	gene	ribosomal-protein	−	50239	50650	411
rpl14	gene	ribosomal-protein	−	50806	51175	369
rpl16	gene	ribosomal-protein	−	51301	52534	1233
rps3	gene	ribosomal-protein	−	52689	53352	663
rpl22	gene	ribosomal-protein	−	53353	53809	456
rps19	gene	ribosomal-protein	−	53868	54147	279
rpl2	gene	ribosomal-protein	−	54202	55684	1482
rpl23	gene	ribosomal-protein	−	55702	55984	282
trnM-CAU	gene	translation-rna	−	56143	56217	74
ycf2	gene	other	+	56305	63115	6810
ycf15	gene	other	+	63256	63454	198
trnL-CAA	gene	translation-rna	−	63713	63794	81
ndhB	gene	nad-dehydrogenase	−	64336	66548	2212
rps7	gene	ribosomal-protein	−	66822	67290	468
trnV-GAC	gene	translation-rna	+	69705	69777	72
rrn16S	gene	ribosomal-rna	+	70003	71494	1491
trnI	gene	translation-rna	+	71792	72812	1020
trnA-UGC	gene	translation-rna	+	72876	73769	893
rrn23S	gene	ribosomal-rna	+	73938	76750	2812
rrn4.5S	gene	ribosomal-rna	+	76848	77072	224
rrn5S	gene	ribosomal-rna	+	77198	77329	131
trnR-ACG	gene	translation-rna	+	77553	77627	74
trnN-GUU	gene	translation-rna	−	78183	78255	72
ndhF	gene	nad-dehydrogenase	−	79331	81572	2241
rpl32	gene	ribosomal-protein	+	82084	82261	177
trnL-UAG	gene	translation-rna	+	82546	82626	80
ccsA	gene	other	+	82721	83696	975
ndhD	gene	nad-dehydrogenase	−	83929	85459	1530
psaC	gene	photosystem-i	−	85559	85805	246
ndhE	gene	nad-dehydrogenase	−	86060	86366	306
ndhG	gene	nad-dehydrogenase	−	86587	87118	531
ndhI	gene	nad-dehydrogenase	−	87480	87981	501
ndhA	gene	nad-dehydrogenase	−	88061	90168	2107
ndhH	gene	nad-dehydrogenase	−	90169	91351	1182
rps15	gene	ribosomal-protein	−	91447	91780	333
ycf1	gene	other	−	91914	97449	5535
trnN-GUU	gene	translation-rna	+	97778	97850	72
trnR-ACG	gene	translation-rna	−	98406	98480	74
rrn5S	gene	ribosomal-rna	−	98704	98835	131
rrn4.5S	gene	ribosomal-rna	−	98961	99185	224
rrn23S	gene	ribosomal-rna	−	99283	102095	2812
trnA-UGC	gene	translation-rna	−	102264	103157	893
trnI	gene	translation-rna	−	103221	104241	1020
rrn16S	gene	ribosomal-rna	−	104539	106030	1491
trnV-GAC	gene	translation-rna	−	106256	106328	72
rps7	gene	ribosomal-protein	+	108743	109211	468
ndhB	gene	nad-dehydrogenase	+	109485	111697	2212
trnL-CAA	gene	translation-rna	+	112239	112320	81
ycf15	gene	other	−	112579	112777	198
ycf2	gene	other	−	112918	119728	6810
trnM-CAU	gene	translation-rna	+	119816	119890	74
rpl23	gene	ribosomal-protein	+	120049	120331	282
rpl2	gene	ribosomal-protein	+	120349	121831	1482
trnH-GUG	gene	translation-rna	−	121943	122017	74
psbA	gene	photosystem-ii	−	122319	123378	1059
trnK-UUU	gene	translation-rna	−	123618	126193	2575
matK	gene	other	−	123908	125438	1530
rps16	gene	ribosomal-protein	−	127087	128259	1172
trnQ-UUG	gene	translation-rna	−	129363	129435	72
psbK	gene	photosystem-ii	+	129756	129942	186
psbI	gene	photosystem-ii	+	130344	130455	111
trnS-GCU	gene	translation-rna	−	130568	130656	88
trnS-CGA	gene	translation-rna	+	131283	132038	755
trnR-UCU	gene	translation-rna	+	132211	132283	72
atpA	gene	atp-synthase	−	132379	133903	1524
atpF	gene	atp-synthase	−	133992	135221	1229
atpH	gene	atp-synthase	−	135582	135828	246
atpI	gene	atp-synthase	−	136802	137546	744
rps2	gene	ribosomal-protein	−	137890	138601	711
rpoC2	gene	rna-polymerase	−	138814	143020	4206
rpoC1	gene	rna-polymerase	−	143174	146005	2831
rpoB	gene	rna-polymerase	−	146031	149244	3213
trnC-GCA	gene	translation-rna	+	150405	150476	71
petN	gene	cytochrome	+	150764	150854	90

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeMW286272.1DNA · accDMW286272DNA · atpBMW286272DNA · matKMW286272DNA · ndhFMW286272DNA · psbAMW286272DNA · rbcLMW286272DNA · rps12MW286272DNA · ycf1MW286272