Coordinate-aware organelle record

Vitex bicolor chloroplast genome

Available NC_065871.1 154,460 bp 131 coordinate-linked features

Gene-position browser

Map and table selections are linked. Coordinates use the source accession coordinate system.

131 features

Gene	Type	Group	Strand	Start	End	Length
trnH-GUG	gene	translation-rna	−	8	82	74
psbA	gene	photosystem-ii	−	433	1492	1059
trnK-UUU	gene	translation-rna	−	1723	4303	2580
matK	gene	other	−	2023	3553	1530
rps16	gene	ribosomal-protein	−	5115	6274	1159
trnQ-UUG	gene	translation-rna	−	7515	7587	72
psbK	gene	photosystem-ii	+	7920	8106	186
psbI	gene	photosystem-ii	+	8488	8599	111
trnS-GCU	gene	translation-rna	−	8727	8815	88
trnS-CGA	gene	translation-rna	+	9535	10285	750
trnR-UCU	gene	translation-rna	+	10465	10537	72
atpA	gene	atp-synthase	−	10640	12164	1524
atpF	gene	atp-synthase	−	12244	13513	1269
atpH	gene	atp-synthase	−	13912	14158	246
atpI	gene	atp-synthase	−	15193	15937	744
rps2	gene	ribosomal-protein	−	16186	16897	711
rpoC2	gene	rna-polymerase	−	17132	21314	4182
rpoC1	gene	rna-polymerase	−	21468	24309	2841
rpoB	gene	rna-polymerase	−	24335	27524	3189
trnC-GCA	gene	translation-rna	+	28720	28791	71
petN	gene	cytochrome	+	29646	29736	90
psbM	gene	photosystem-ii	−	30742	30847	105
trnD-GUC	gene	translation-rna	−	31373	31447	74
trnY-GUA	gene	translation-rna	−	31555	31639	84
trnE-UUC	gene	translation-rna	−	31698	31771	73
trnT-GGU	gene	translation-rna	+	32197	32269	72
psbD	gene	photosystem-ii	+	33642	34704	1062
psbC	gene	photosystem-ii	+	34651	36073	1422
trnS-UGA	gene	translation-rna	−	36324	36417	93
psbZ	gene	photosystem-ii	+	36750	36939	189
trnG-GCC	gene	translation-rna	+	37208	37279	71
trnM-CAU	gene	translation-rna	−	37436	37510	74
rps14	gene	ribosomal-protein	−	37659	37962	303
psaB	gene	photosystem-i	−	38084	40289	2205
psaA	gene	photosystem-i	−	40314	42567	2253
ycf3	gene	other	−	43300	45244	1944
trnS-GGA	gene	translation-rna	+	46037	46124	87
rps4	gene	ribosomal-protein	−	46405	47011	606
trnT-UGU	gene	translation-rna	−	47379	47452	73
trnL-UAA	gene	translation-rna	+	48115	48685	570
trnF-GAA	gene	translation-rna	+	48990	49063	73
ndhJ	gene	nad-dehydrogenase	−	49732	50209	477
ndhK	gene	nad-dehydrogenase	−	50315	50993	678
ndhC	gene	nad-dehydrogenase	−	51046	51409	363
trnM-CAU	gene	translation-rna	+	53281	53354	73
atpE	gene	atp-synthase	−	53580	53982	402
atpB	gene	atp-synthase	−	53978	55475	1497
rbcL	gene	other	+	56281	57724	1443
accD	gene	other	+	58421	59903	1482
psaI	gene	photosystem-i	+	60628	60739	111
ycf4	gene	other	+	61179	61734	555
cemA	gene	other	+	62396	63086	690
petA	gene	cytochrome	+	63300	64263	963
psbJ	gene	photosystem-ii	−	65313	65436	123
psbL	gene	photosystem-ii	−	65569	65686	117
psbF	gene	photosystem-ii	−	65709	65829	120
psbE	gene	photosystem-ii	−	65843	66095	252
petL	gene	cytochrome	+	67032	67128	96
petG	gene	cytochrome	+	67302	67416	114
trnW-CCA	gene	translation-rna	−	67538	67612	74
trnP-UGG	gene	translation-rna	−	67767	67841	74
psaJ	gene	photosystem-i	+	68118	68253	135
rpl33	gene	ribosomal-protein	+	68732	68933	201
rps18	gene	ribosomal-protein	+	69101	69407	306
rpl20	gene	ribosomal-protein	−	69664	70051	387
rps12	gene	ribosomal-protein	−	70883	99276	28393
rps12	gene	ribosomal-protein	+	70883	140585	69702
clpP	gene	other	−	71129	73112	1983
psbB	gene	photosystem-ii	+	73581	75108	1527
psbT	gene	photosystem-ii	+	75310	75418	108
psbN	gene	photosystem-ii	−	75485	75617	132
psbH	gene	photosystem-ii	+	75704	75944	240
petB	gene	cytochrome	+	76068	77454	1386
petD	gene	cytochrome	+	78340	78865	525
rpoA	gene	rna-polymerase	−	79026	80046	1020
rps11	gene	ribosomal-protein	−	80117	80534	417
rpl36	gene	ribosomal-protein	−	80635	80749	114
infA	gene	other	−	80844	81078	234
rps8	gene	ribosomal-protein	−	81202	81607	405
rpl14	gene	ribosomal-protein	−	81791	82160	369
rpl16	gene	ribosomal-protein	−	82286	82697	411
rps3	gene	ribosomal-protein	−	83756	84419	663
rpl22	gene	ribosomal-protein	−	84403	84871	468
rps19	gene	ribosomal-protein	−	84922	85201	279
rpl2	gene	ribosomal-protein	−	85261	86743	1482
rpl23	gene	ribosomal-protein	−	86761	87043	282
trnM-CAU	gene	translation-rna	−	87208	87282	74
ycf2	gene	other	+	87390	94254	6864
ycf15	gene	other	+	94395	94593	198
trnL-CAA	gene	translation-rna	−	94853	94934	81
ndhB	gene	nad-dehydrogenase	−	95481	97693	2212
rps7	gene	ribosomal-protein	−	97956	98424	468
trnV-GAC	gene	translation-rna	+	100874	100946	72
rrn16S	gene	ribosomal-rna	+	101173	102664	1491
trnI	gene	translation-rna	+	102962	103981	1019
trnA-UGC	gene	translation-rna	+	104045	104923	878
rrn23S	gene	ribosomal-rna	+	105091	107902	2811
rrn4.5S	gene	ribosomal-rna	−	108000	108265	265
rrn5S	gene	ribosomal-rna	+	108358	108489	131
trnR-ACG	gene	translation-rna	+	108722	108796	74
trnN-GUU	gene	translation-rna	−	109365	109437	72
ycf1	gene	other	+	109768	110920	1152
ndhF	gene	nad-dehydrogenase	−	110813	113060	2247
trnL-UAG	gene	translation-rna	+	114594	114674	80
ccsA	gene	other	+	114764	115751	987
ndhD	gene	nad-dehydrogenase	−	116018	117518	1500
psaC	gene	photosystem-i	−	117646	117892	246
ndhE	gene	nad-dehydrogenase	−	118154	118460	306
ndhG	gene	nad-dehydrogenase	−	118673	119204	531
ndhI	gene	nad-dehydrogenase	−	119564	120071	507
ndhA	gene	nad-dehydrogenase	−	120153	122335	2182
ndhH	gene	nad-dehydrogenase	−	122336	123518	1182
rps15	gene	ribosomal-protein	−	123616	123889	273
ycf1	gene	other	−	124303	129850	5547
trnN-GUU	gene	translation-rna	+	130181	130253	72
trnR-ACG	gene	translation-rna	−	130822	130896	74
rrn5S	gene	ribosomal-rna	−	131129	131260	131
rrn4.5S	gene	ribosomal-rna	+	131353	131618	265
rrn23S	gene	ribosomal-rna	−	131716	134527	2811
trnA-UGC	gene	translation-rna	−	134695	135573	878
trnI	gene	translation-rna	−	135637	136656	1019
rrn16S	gene	ribosomal-rna	−	136954	138445	1491
trnV-GAC	gene	translation-rna	−	138672	138744	72
rps7	gene	ribosomal-protein	+	141194	141662	468
ndhB	gene	nad-dehydrogenase	+	141925	144137	2212
trnL-CAA	gene	translation-rna	+	144684	144765	81
ycf15	gene	other	−	145025	145223	198
ycf2	gene	other	−	145364	152228	6864
trnM-CAU	gene	translation-rna	+	152336	152410	74
rpl23	gene	ribosomal-protein	+	152575	152857	282
rpl2	gene	ribosomal-protein	+	152875	154357	1482

Sources and evidence boundary

Accessions, release scope and coordinate evidence remain visible beside the visualization.

Full species sources

Chloroplast genomeNC_065871.1DNA · accDNC_065871DNA · atpBNC_065871DNA · matKNC_065871DNA · ndhFNC_065871DNA · psbANC_065871DNA · rbcLNC_065871DNA · rps12NC_065871DNA · ycf1NC_065871