LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Gene evidence record

cox1

Cytochrome c oxidase subunit 1

PathwayRespiration markerLocalizationmitochondrial genomeMetabolite grouporganelle marker
BLAST this geneAlign records
Species with evidence50
DNA records26
Coordinate loci51
Organelle assemblies50
Evidence stateAvailable

Functional annotation

Curated function is shown separately from locus and sequence evidence.

Mitochondrial marker frequently used in comparative organelle analyses.

Provides a simple mitochondrial marker for organelle-focused browsing.

Gene symbol
cox1
Full name
Cytochrome c oxidase subunit 1
Pathway
Respiration marker
Localization
mitochondrial genome
Metabolite group
organelle marker
Curation
Functional panel annotation

Species evidence

Species-level DNA, coordinate and organelle coverage for this symbol.

50 species
SpeciesTaxonomyOrganelleDNA recordsCoordinate lociAccessions
Ajuga campylanthoides
AjugoideaeAjuga
mitochondrial01MT277293.1Species evidence
Ajuga chamaepitys
AjugoideaeAjuga
mitochondrial01OY282509.1Species evidence
Ajuga ciliata
AjugoideaeAjuga
mitochondrial01MT075725.1Species evidence
Ajuga decumbens
AjugoideaeAjuga
mitochondrial11PV972819
PV972819.1		Species evidence
Ajuga lupulina
AjugoideaeAjuga
mitochondrial01MT277247.1Species evidence
Ajuga reptans
AjugoideaeAjuga
mitochondrial11KF709392
KF709392.1		Species evidence
Anisomeles indica
LamioideaeAnisomeles
mitochondrial11PP554241
PP554241.1		Species evidence
Ballota nigra
LamioideaeBallota
mitochondrial01OX344733.1Species evidence
Callicarpa americana
CallicarpoideaeCallicarpa
mitochondrial11PX121882
PX121882.1		Species evidence
Callicarpa nudiflora
CallicarpoideaeCallicarpa
mitochondrial11PX091360
PX091360.1		Species evidence
Caryopteris mongholica
AjugoideaeCaryopteris
mitochondrial01MT277261.1Species evidence
Elsholtzia blanda
NepetoideaeElsholtzia
mitochondrial11PP755340
PP755340.1		Species evidence
Galeopsis tetrahit
LamioideaeGaleopsis
mitochondrial01OY776139.1Species evidence
Glechoma hederacea
NepetoideaeGlechoma
mitochondrial01OZ258497.1Species evidence
Lamium amplexicaule
LamioideaeLamium
mitochondrial01OZ060788.1Species evidence
Lavandula angustifolia
NepetoideaeLavandula
mitochondrial11OR296704
OR296704.1		Species evidence
Leonurus japonicus
LamioideaeLeonurus
mitochondrial11C_AA079493.1Species evidence
Melittis melissophyllum
LamioideaeMelittis
mitochondrial01OZ218192.1Species evidence
Mentha aquatica
NepetoideaeMentha
mitochondrial01OZ278035.1Species evidence
Mentha spicata
NepetoideaeMentha
mitochondrial01ON631245.1Species evidence
Mosla chinensis
NepetoideaeMosla
mitochondrial01Mosla_chin_18Species evidence
Ocimum basilicum
NepetoideaeOcimum
mitochondrial02PZ530181.1Species evidence
Paraleonurus japonicus
LamioideaeParaleonurus
mitochondrial11PV368446
PV368446.1		Species evidence
Perilla frutescens
NepetoideaePerilla
mitochondrial11C_AA059311
C_AA059311.1		Species evidence
Perilla frutescens var. hirtella
NepetoideaePerilla
mitochondrial11PQ048223
PQ048223.1		Species evidence
Phlomoides rotata
LamioideaePhlomoides
mitochondrial11PV591333
PV591333.1		Species evidence
Platostoma chinense
NepetoideaePlatostoma
mitochondrial11OP537517
OP537517.1		Species evidence
Pogostemon heyneanus
LamioideaePogostemon
mitochondrial11MK728874
MK728874.1		Species evidence
Prunella vulgaris
NepetoideaePrunella
mitochondrial11OR113011
OR113011.1		Species evidence
Pseudocaryopteris paniculata
AjugoideaePseudocaryopteris
mitochondrial01MT277169.1Species evidence
Rotheca serrata
AjugoideaeRotheca
mitochondrial11MT075727
MT075727.1		Species evidence
Salvia hispanica
NepetoideaeSalvia
mitochondrial01CM056166.1Species evidence
Salvia miltiorrhiza
NepetoideaeSalvia
mitochondrial11KF177345
NC_023209.1		Species evidence
Salvia officinalis
NepetoideaeSalvia
mitochondrial01OQ001564.1Species evidence
Salvia plebeia
NepetoideaeSalvia
mitochondrial11PV618423
PV618423.1		Species evidence
Salvia rosmarinus
NepetoideaeSalvia
mitochondrial11PP992923
PP992923.1		Species evidence
Salvia splendens
NepetoideaeSalvia
mitochondrial01OQ675154.1Species evidence
Scutellaria amoena
ScutellarioideaeScutellaria
mitochondrial01MT277181.1Species evidence
Scutellaria barbata
ScutellarioideaeScutellaria
mitochondrial11MZ127834
MZ127834.1		Species evidence
Scutellaria cypria
ScutellarioideaeScutellaria
mitochondrial11OR344312
OR344312.1		Species evidence
Scutellaria franchetiana
ScutellarioideaeScutellaria
mitochondrial11MZ127835
MZ127835.1		Species evidence
Scutellaria galericulata
ScutellarioideaeScutellaria
mitochondrial01OX335799.1Species evidence
Scutellaria insignis
ScutellarioideaeScutellaria
mitochondrial11PX505256
PX505256.1		Species evidence
Scutellaria minor
ScutellarioideaeScutellaria
mitochondrial01OX940739.1Species evidence
Scutellaria strigillosa
ScutellarioideaeScutellaria
mitochondrial11PX505255
PX505255.1		Species evidence
Scutellaria tsinyunensis
ScutellarioideaeScutellaria
mitochondrial11MW553042
MW553042.1		Species evidence
Stachys alpina
LamioideaeStachys
mitochondrial01OZ244442.1Species evidence
Teucrium botrys
AjugoideaeTeucrium
mitochondrial01OZ318418.1Species evidence
Teucrium scorodonia
AjugoideaeTeucrium
mitochondrial01OZ243853.1Species evidence
Vitex negundo var. cannabifolia
ViticoideaeVitex
mitochondrial11PQ493832
PQ493832.1		Species evidence

Coordinate-linked loci

Raw accession, coordinate range, strand and feature type remain visible. Duplicate copies within an assembly are not collapsed.

51 loci
SpeciesOrganelleAccessionFeatureCoordinatesStrandLength
Ajuga campylanthoidesMitochondrialMT277293.1gene9211–117521—Open map
Ajuga chamaepitysMitochondrialOY282509.1gene98937–101478-1—Open map
Ajuga ciliataMitochondrialMT075725.1gene202243–2047871—Open map
Ajuga decumbensMitochondrialPV972819.1gene52170–54714-1—Open map
Ajuga lupulinaMitochondrialMT277247.1gene68298–70839-1—Open map
Ajuga reptansMitochondrialKF709392.1gene317824–3203681—Open map
Anisomeles indicaMitochondrialPP554241.1gene86277–888211—Open map
Ballota nigraMitochondrialOX344733.1gene22368–24905-1—Open map
Callicarpa americanaMitochondrialPX121882.1gene454473–456056-1—Open map
Callicarpa nudifloraMitochondrialPX091360.1gene82402–839851—Open map
Caryopteris mongholicaMitochondrialMT277261.1gene3139–47191—Open map
Elsholtzia blandaMitochondrialPP755340.1gene58053–60597-1—Open map
Galeopsis tetrahitMitochondrialOY776139.1gene23357–25881-1—Open map
Glechoma hederaceaMitochondrialOZ258497.1gene11350–13891-1—Open map
Lamium amplexicauleMitochondrialOZ060788.1gene300557–3030981—Open map
Lavandula angustifoliaMitochondrialOR296704.1gene259337–261876-1—Open map
Leonurus japonicusMitochondrialC_AA079493.1gene315908–3184521—Open map
Melittis melissophyllumMitochondrialOZ218192.1gene96220–987611—Open map
Mentha aquaticaMitochondrialOZ278035.1gene216538–219089-1—Open map
Mentha spicataMitochondrialON631245.1gene126053–1301811—Open map
Mosla chinensisMitochondrialMosla_chin_18gene1–23501—Open map
Ocimum basilicumMitochondrialPZ530181.1gene136122–138661-1—Open map
Ocimum basilicumMitochondrialPZ530181.1gene241448–243987-1—Open map
Paraleonurus japonicusMitochondrialPV368446.1gene241758–2443021—Open map
Perilla frutescensMitochondrialC_AA059311.1gene3156–56971—Open map
Perilla frutescens var. hirtellaMitochondrialPQ048223.1gene80846–833901—Open map
Phlomoides rotataMitochondrialPV591333.1gene315953–3184971—Open map
Platostoma chinenseMitochondrialOP537517.1gene473804–4763381—Open map
Pogostemon heyneanusMitochondrialMK728874.1gene1–25451—Open map
Prunella vulgarisMitochondrialOR113011.1gene253375–2559381—Open map
Pseudocaryopteris paniculataMitochondrialMT277169.1gene219–1802-1—Open map
Rotheca serrataMitochondrialMT075727.1gene29943–32487-1—Open map
Salvia hispanicaMitochondrialCM056166.1gene293363–2959011—Open map
Salvia miltiorrhizaMitochondrialNC_023209.1gene343457–3460011—Open map
Salvia officinalisMitochondrialOQ001564.1gene228165–230709-1—Open map
Salvia plebeiaMitochondrialPV618423.1gene68985–71534-1—Open map
Salvia rosmarinusMitochondrialPP992923.1gene187095–1896341—Open map
Salvia splendensMitochondrialOQ675154.1gene83802–863461—Open map
Scutellaria amoenaMitochondrialMT277181.1gene58304–60845-1—Open map
Scutellaria barbataMitochondrialMZ127834.1gene320929–323473-1—Open map
Scutellaria cypriaMitochondrialOR344312.1gene270044–2725881—Open map
Scutellaria franchetianaMitochondrialMZ127835.1gene13761–163051—Open map
Scutellaria galericulataMitochondrialOX335799.1gene89146–916871—Open map
Scutellaria insignisMitochondrialPX505256.1gene222042–224586-1—Open map
Scutellaria minorMitochondrialOX940739.1gene370352–372893-1—Open map
Scutellaria strigillosaMitochondrialPX505255.1gene283944–2864881—Open map
Scutellaria tsinyunensisMitochondrialMW553042.1gene244787–2473311—Open map
Stachys alpinaMitochondrialOZ244442.1gene85616–88157-1—Open map
Teucrium botrysMitochondrialOZ318418.1gene19439–210101—Open map
Teucrium scorodoniaMitochondrialOZ243853.1gene333465–335021-1—Open map
Vitex negundo var. cannabifoliaMitochondrialPQ493832.1gene323656–325239-1—Open map

Publication-safe DNA records

Only nucleotide records are publicly exposed. Protein sequences are intentionally omitted.

26 DNA records
Ajuga decumbensCOX12545 bp · PV972819
ATGAAAAATCTGGATCGATGGCTTTTCTCCACTAACCACAAGGATATAGGGACTCTCTATTTTATCTTCGGTGCGATTGCTGGAGTGATG…
Open sequence
Ajuga reptanscox12545 bp · KF709392
ATGAAAAATCTGGATCGATGGCTTTTCTCCACTAACCACAAGGATATAGGGACTCTCTATTTTATCTTCGGTGCGATTGCTGGAGTGATG…
Open sequence
Rotheca serratacox12545 bp · MT075727
ATGACAAATCTGGTTCGATGGCTGTTCTCCACTAACCACAAGGATATAGGGACTCTATATTTCATCTTCGGTGCGATTGCTGGAGTGATG…
Open sequence
Salvia plebeiaCOX12550 bp · PV618423
ATGACAAATCTGGTTCGATGGCTTTTCTCCACTAACCACAAAGATATAGGGACTCTCTATTTCATCTTCGGTGCCATTGCTGGAGTGATG…
Open sequence

Accessions

Traceable identifiers associated with this gene evidence.

C_AA079493.12 linked recordsPZ530181.12 linked recordsMT277293.11 linked recordOY282509.11 linked recordMT075725.11 linked recordPV972819.11 linked recordMT277247.11 linked recordKF709392.11 linked recordPP554241.11 linked recordOX344733.11 linked recordPX121882.11 linked recordPX091360.11 linked recordMT277261.11 linked recordPP755340.11 linked recordOY776139.11 linked recordOZ258497.11 linked recordOZ060788.11 linked recordOR296704.11 linked recordOZ218192.11 linked recordOZ278035.11 linked recordON631245.11 linked recordMosla_chin_181 linked recordPV368446.11 linked recordC_AA059311.11 linked recordPQ048223.11 linked recordPV591333.11 linked recordOP537517.11 linked recordMK728874.11 linked recordOR113011.11 linked recordMT277169.11 linked recordMT075727.11 linked recordCM056166.11 linked recordNC_023209.11 linked recordOQ001564.11 linked recordPV618423.11 linked recordPP992923.11 linked recordOQ675154.11 linked recordMT277181.11 linked recordMZ127834.11 linked recordOR344312.11 linked recordMZ127835.11 linked recordOX335799.11 linked recordPX505256.11 linked recordOX940739.11 linked recordPX505255.11 linked recordMW553042.11 linked recordOZ244442.11 linked recordOZ318418.11 linked recordOZ243853.11 linked recordPQ493832.11 linked recordPV9728191 linked recordKF1773451 linked recordC_AA0593111 linked recordPP9929231 linked recordKF7093921 linked recordPP5542411 linked recordPX1218821 linked recordPX0913601 linked recordPP7553401 linked recordOR2967041 linked recordPV3684461 linked recordPQ0482231 linked recordPV5913331 linked recordOP5375171 linked recordMK7288741 linked recordOR1130111 linked recordMT0757271 linked recordPV6184231 linked recordMZ1278341 linked recordOR3443121 linked recordMZ1278351 linked recordPX5052561 linked recordPX5052551 linked recordMW5530421 linked recordPQ4938321 linked record