Resource summary
This dossier brings together taxonomy, phylogeny access, omics modules, functional loci, and analysis tools so users can move smoothly from lineage-level browsing to locus-level inspection.
Species scientific record
Salvia miltiorrhiza
丹参
Danshen sage
Aliases: Danshen sage, S. miltiorrhiza, Salvia miltiorrhiza +3
A curated Salvia resource that supports comparative browsing across nuclear, chloroplast, mitochondrial, and transcriptome datasets within the Lamiaceae database.
Evidence coverage
Current public omics layers
3 available · 1 metadata only · 0 unavailable
Record overview
Taxonomy, biological context and the scope of the current release.
Salvia miltiorrhiza is presented as an integrated entry point for phylogeny-guided navigation, organelle-genome visualization, nuclear-genome summaries, and functional-gene exploration.
Research relevance
Best known for tanshinones and phenolic acids, making it central to biosynthetic gene presentation.
- Distribution
- Primarily distributed in China and frequently cultivated for medicinal use.
- Research / medicinal context
- Best known for tanshinones and phenolic acids, making it central to biosynthetic gene presentation.
Omics evidence matrix
Accession-backed, metadata-only and unavailable states remain scientifically distinct.
| Layer | Status | Accession / dataset | Assembly size | GC | Genes / features | Coordinates | |
|---|---|---|---|---|---|---|---|
Nuclear genome |
— | 513.9 Mb | 36.0% | 33348 | — | View layer | |
Chloroplast genome |
Available | OR652279.1 |
151,394 bp | 38.0% | 132 | 132 loci | View layer |
Mitochondrial genome |
Available | NC_023209.1 |
499,236 bp | 44.4% | 167 | 167 loci | View layer |
Transcriptome |
Available | Salvia_miltiorrhiza.gene_tpm_log1p |
12 samples | — | 18549 | — | View layer |
Genes linked to this species
Gene symbols are included only when DNA sequence or coordinate evidence exists.
| Gene | Full name / pathway | Localization | DNA records | Coordinate loci | |
|---|---|---|---|---|---|
| accD | Functional annotation not curatedNo pathway assignment |
— | 1 | 1 | Gene record |
| atp1 | Functional annotation not curatedNo pathway assignment |
— | 1 | 1 | Gene record |
| atp4 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atp6 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atp8 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atp9 | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpA | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpB | Functional annotation not curatedNo pathway assignment |
— | 1 | 2 | Gene record |
| atpE | Functional annotation not curatedNo pathway assignment |
— | 0 | 2 | Gene record |
| atpF | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpH | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
| atpI | Functional annotation not curatedNo pathway assignment |
— | 0 | 1 | Gene record |
Publication-safe DNA records
Public sequence content is DNA-only; no protein FASTA is exposed.
accDaccD
NC_0204311488 bpchloroplast genome
Open FASTA
atp1atp1
KF1773451479 bpmitochondrial genome
Open FASTA
atpBatpB
NC_0204311497 bpchloroplast genome
Open FASTA
cobcob
KF1773451185 bpmitochondrial genome
Open FASTA
cox1cox1
KF1773452545 bpmitochondrial genome
Open FASTA
matKmatK
NC_0204311563 bpchloroplast genome
Open FASTA
matRmatR
KF1773451956 bpmitochondrial genome
Open FASTA
nad1nad1
KF1773452214 bpmitochondrial genome
Open FASTA
Pathway evidence
Family-level summaries and concrete candidate loci are kept separate.
5188 candidate records across 96 modules935 strong locus records are available for inspection.