Pathway-family scientific record

6OMT_4OMT_SOMT

6OMT / 4OMT / SOMT enzyme-family module

This module includes PlantSME enzyme-family assignments and traceable candidate protein identifiers from genome-derived or transcriptome-derived protein sets.

Stable locus plantsmeAlkaloid-related biosynthesis
Public candidate IDs
67
Species with candidates
31
Species with assignments
31
Source assignments
67
Gene-tree candidates
0
Motif candidates
0

Evidence profile

Available evidence layers

◆Candidate identifiers67 public species-linked identifiers can be inspected.
GTGene-tree workflow0 comparable source candidates; 0 high-confidence source calls.
MMotif-screen proxy0 motif-screen candidates; 0 with all required motif proxies.
100 kbLocal clustering proxy0 clusters across 0 species; maximum cluster size 0.

Comparative signature

Lamiaceae comparison fields

Rate delta
Not calculated
Prevalence delta
Not calculated
Comparable source
PlantSME family assignments
Comparable source count
67
Public candidate count
67
Evidence mode
plantsme

Species coverage

Assignment and locus coverage by species

Source family counts and public candidate identifiers are shown in separate columns.

SpeciesEvidence stateSource countCandidate IDsExpression
Ajuga decumbensAjugoideae · Ajuga Stable locus 99 No matrix
Isodon lophanthoidesNepetoideae · Isodon Stable locus 88 No matrix
Pogostemon cablinLamioideae · Pogostemon Stable locus 66 Available
Ocimum basilicumNepetoideae · Ocimum Stable locus 44 Available
Vitex agnus-castusViticoideae · Vitex Stable locus 44 No matrix
Premna microphyllaPremnoideae · Premna Stable locus 33 No matrix
Callicarpa nudifloraCallicarpoideae · Callicarpa Stable locus 22 No matrix
Drepanocaryum sewerzowiiNepetoideae · Drepanocaryum Stable locus 22 No matrix
Hyssopus officinalisNepetoideae · Hyssopus Stable locus 22 No matrix
Melissa officinalisNepetoideae · Melissa Stable locus 22 No matrix
Ocimum tenuiflorumNepetoideae · Ocimum Stable locus 22 No matrix
Phlomis fruticosaLamioideae · Phlomis Stable locus 22 No matrix
Phlomoides rotataLamioideae · Phlomoides Stable locus 22 No matrix
Teucrium chamaedrysAjugoideae · Teucrium Stable locus 22 No matrix
Ajuga reptansAjugoideae · Ajuga Stable locus 11 No matrix
Ballota pseudodictamnusLamioideae · Ballota Stable locus 11 No matrix
Cornutia pyramidataPremnoideae · Cornutia Stable locus 11 No matrix
Glechoma hederaceaNepetoideae · Glechoma Stable locus 11 No matrix
Holmskioldia sanguineaScutellarioideae · Holmskioldia Stable locus 11 No matrix
Leonurus japonicusLamioideae · Leonurus Stable locus 11 No matrix
Marmoritis complanataNepetoideae · Marmoritis Stable locus 11 No matrix
Mentha longifoliaNepetoideae · Mentha Stable locus 11 Available
Origanum vulgareNepetoideae · Origanum Stable locus 11 No matrix
Petraeovitex bambusetoriumPeronematoideae · Petraeovitex Stable locus 11 No matrix
Salvia rosmarinusNepetoideae · Salvia Stable locus 11 Available
Salvia splendensNepetoideae · Salvia Stable locus 11 No matrix
Schizonepeta tenuifoliaNepetoideae · Schizonepeta Stable locus 11 No matrix
Scutellaria barbataScutellarioideae · Scutellaria Stable locus 11 No matrix
Stachys officinalisLamioideae · Stachys Stable locus 11 No matrix
Stenogyne calaminthoidesLamioideae · Stenogyne Stable locus 11 No matrix
Tectona grandisTectonoideae · Tectona Stable locus 11 Available

Candidate records

Traceable candidate identifiers

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