Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

3,377 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
AGFO_c13232_g1_i1_len_314	Agastache foeniculum	Alkaloid · `CODM_T6ODM`	blast+hmm	High	37.1%	30.6
GlLon_001695-T1	Glechoma longituba	Alkaloid · `CODM_T6ODM`	blast+hmm	High	33.7%	30.6
Ms_c007g02507.1	Mosla soochowensis	Alkaloid · `CODM_T6ODM`	blast+hmm	High	36.4%	29.8
VIAG_c73434_g1_i1_len_382	Vitex agnus-castus	Alkaloid · `CODM_T6ODM`	blast+hmm	High	68.9%	28.5
469.g64.t1	Ocimum basilicum	Alkaloid · `CODM_T6ODM`	blast+hmm	High	44.0%	28.0
COTO_c40978_g2_i1_len_1360	Congea tomentosa	Alkaloid · `CODM_T6ODM`	blast+hmm	High	46.5%	27.8
AJRE_c8176_g1_i1_len_317	Ajuga reptans	Alkaloid · `CODM_T6ODM`	blast+hmm	High	47.7%	27.1
Smil01G0027610.1.v1.484	Salvia miltiorrhiza	Alkaloid · `CODM_T6ODM`	blast+hmm	High	32.7%	26.9
LYAM_c2988_g2_i1_len_708	Lycopus americanus	Alkaloid · `CODM_T6ODM`	blast+hmm	High	54.5%	26.6
MESP_c68953_g1_i1_len_288	Mentha spicata	Alkaloid · `CODM_T6ODM`	blast+hmm	High	59.2%	26.5
MESP_c45038_g3_i1_len_646	Mentha spicata	Alkaloid · `CODM_T6ODM`	blast+hmm	High	62.5%	26.4
LAAN_c75296_g1_i1_len_315	Lavandula angustifolia	Alkaloid · `CODM_T6ODM`	blast+hmm	High	48.1%	26.1
PRLA_c37548_g1_i1_len_401	Prostanthera lasianthos	Alkaloid · `CODM_T6ODM`	blast+hmm	High	55.9%	26.0
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_36.332.mRNA1	Stenogyne calaminthoides	Alkaloid · `CODM_T6ODM`	blast+hmm	High	33.0%	26.0
WEFR_c19069_g1_i1_len_319	Westringia fruticosa	Alkaloid · `CODM_T6ODM`	blast+hmm	High	52.8%	26.0
BAPS_c29376_g1_i1_len_356	Ballota pseudodictamnus	Alkaloid · `CODM_T6ODM`	blast+hmm	High	37.5%	25.9
THVU_c81164_g1_i1_len_270	Thymus vulgaris	Alkaloid · `CODM_T6ODM`	blast+hmm	High	56.7%	25.9
TECA_c52143_g1_i1_len_253	Teucrium canadense	Alkaloid · `CODM_T6ODM`	blast+hmm	High	54.0%	25.8
HYSU_c59832_g1_i1_len_395	Hyptis suaveolens	Alkaloid · `CODM_T6ODM`	blast+hmm	High	56.7%	25.6
PRMI_c116540_g1_i1_len_517	Premna microphylla	Alkaloid · `CODM_T6ODM`	blast+hmm	High	41.8%	24.8
HYSU_c95276_g1_i1_len_296	Hyptis suaveolens	Alkaloid · `CODM_T6ODM`	blast+hmm	High	47.1%	24.3
Mc8g07540.1	Mosla chinensis	Alkaloid · `CODM_T6ODM`	blast+hmm	High	44.8%	24.0
Pat_B19G119600.m1	Pogostemon cablin	Alkaloid · `CODM_T6ODM`	blast+hmm	High	35.1%	24.0
GMPH_c54494_g1_i1_len_254	Gmelina philippensis	Alkaloid · `CODM_T6ODM`	blast+hmm	High	60.7%	23.3
Pat_B27G058900.m1	Pogostemon cablin	Alkaloid · `CODM_T6ODM`	blast+hmm	High	31.2%	23.0
MODI_c46336_g1_i1_len_274	Monarda didyma	Alkaloid · `CODM_T6ODM`	blast+hmm	High	52.3%	22.6
VIAG_c13676_g1_i1_len_651	Vitex agnus-castus	Alkaloid · `CODM_T6ODM`	blast+hmm	High	63.2%	22.5
PRLA_c45819_g1_i1_len_316	Prostanthera lasianthos	Alkaloid · `CODM_T6ODM`	blast+hmm	High	36.2%	22.0
COCA_c51630_g1_i1_len_321	Collinsonia canadensis	Alkaloid · `CODM_T6ODM`	blast+hmm	High	47.8%	21.7
HYSU_c70291_g1_i1_len_321	Hyptis suaveolens	Alkaloid · `CODM_T6ODM`	blast+hmm	High	41.4%	21.6
LYAM_c34932_g2_i1_len_560	Lycopus americanus	Alkaloid · `CODM_T6ODM`	blast+hmm	High	45.2%	21.4
COPY_c74061_g2_i1_len_274	Cornutia pyramidata	Alkaloid · `CODM_T6ODM`	blast+hmm	High	56.2%	21.2
PHFR_c92100_g1_i1_len_326	Phlomis fruticosa	Alkaloid · `CODM_T6ODM`	blast+hmm	High	60.7%	21.1
STOF_c23809_g1_i1_len_266	Stachys officinalis	Alkaloid · `CODM_T6ODM`	blast+hmm	High	51.9%	20.8
CLBU_c19823_g1_i1_len_271	Clerodendrum bungei	Alkaloid · `CODM_T6ODM`	blast+hmm	High	46.7%	20.7
COTO_c90531_g1_i1_len_293	Congea tomentosa	Alkaloid · `CODM_T6ODM`	blast+hmm	High	39.2%	20.5
Sbow08G0016080.1	Salvia bowleyana	Alkaloid · `CODM_T6ODM`	blast+hmm	High	41.1%	19.2
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_1.1275.mRNA1	Stenogyne calaminthoides	Alkaloid · `CODM_T6ODM`	blast+hmm	High	35.9%	19.2
VIAG_c15215_g1_i1_len_297	Vitex agnus-castus	Alkaloid · `CODM_T6ODM`	blast+hmm	High	45.3%	18.9
Clgra_017419-T1	Clinopodium gracile	Alkaloid · `CODM_T6ODM`	blast+hmm	High	45.0%	18.4
HYSU_c38779_g1_i1_len_728	Hyptis suaveolens	Alkaloid · `CODM_T6ODM`	blast+hmm	High	54.7%	18.3
PRLA_c59117_g1_i1_len_379	Prostanthera lasianthos	Alkaloid · `CODM_T6ODM`	blast+hmm	High	62.3%	18.2
LAAN_c123992_g1_i1_len_252	Lavandula angustifolia	Alkaloid · `CODM_T6ODM`	blast+hmm	High	50.0%	18.1
GLHE_c50382_g1_i1_len_310	Glechoma hederacea	Alkaloid · `CODM_T6ODM`	blast+hmm	High	32.1%	16.4
VIAG_c44935_g3_i1_len_265	Vitex agnus-castus	Alkaloid · `CODM_T6ODM`	blast+hmm	High	52.6%	16.0
MODI_c41246_g1_i3_len_2700	Monarda didyma	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	60.6%	454.6
g11607.t1	Nepeta cataria	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	62.1%	374.5
Mlonscaffold_8_length_368420820178810.1.v1.326	Mentha longifolia	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	62.0%	355.7
g16162.t1	Nepeta cataria	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	59.5%	315.5
Sbai8C31T11.1	Scutellaria baicalensis	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	61.1%	302.8