Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

3,377 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
Teucrium_chamaedrys__Tcha65768	Teucrium chamaedrys	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	42.9%	63.3
XP_042027312.1	Salvia splendens	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	42.1%	62.5
Mc7g12530.1	Mosla chinensis	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	60.0%	62.4
Teucrium_chamaedrys__Tcha95390	Teucrium chamaedrys	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	40.2%	61.9
AG34_scaffold5_15260T	Agastache rugosa	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	46.9%	61.7
g19245.t1	Nepeta mussinii	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	50.7%	61.0
rna-gnl\|WGS:QFCC\|chr08_11939832_11943089.mrna1	Perilla frutescens	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	42.5%	60.6
rna-gnl\|WGS:QIYW\|chr04_56195103_56198161.mrna1	Perilla citriodora	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	42.5%	60.6
rna-gnl\|WGS:QIYW\|chr04_56195103_56198161.mrna1	Perilla frutescens var. hirtella	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	42.5%	60.6
Sbai6A58T72.1	Scutellaria baicalensis	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	45.9%	60.0
Teum.03G013940.1	Teucrium marum	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	43.2%	60.0
Roff25260338890	Salvia rosmarinus	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	64.7%	59.4
g42968.t1	Nepeta cataria	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	28.4%	58.7
Dru_6G0010600.1	Dracocephalum rupestre	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	32.8%	58.5
Ls4g24080.1	Leonurus sibiricus	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	25.8%	58.5
WEFR_c48198_g1_i1_len_1437	Westringia fruticosa	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	47.9%	58.0
CLBU_c49332_g1_i1_len_1319	Clerodendrum bungei	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	33.8%	57.4
Teucrium_chamaedrys__Tcha20019	Teucrium chamaedrys	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	41.4%	56.9
PEBA_c85425_g1_i1_len_342	Petraeovitex bambusetorium	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	27.6%	56.4
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_52.1401.mRNA1	Stenogyne calaminthoides	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	25.6%	56.3
PRLA_c45196_g1_i1_len_469	Prostanthera lasianthos	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	28.3%	55.9
380.g56.t1	Ocimum basilicum	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	24.5%	55.6
g19901.t1	Hyssopus officinalis	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	51.4%	55.6
origanum_vulgare_304.g239.t1	Origanum vulgare	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	39.3%	55.6
ROMY_c86909_g1_i1_len_406	Rotheca myricoides	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	28.1%	55.3
MAVU_c949_g1_i1_len_1337	Marrubium vulgare	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	25.0%	55.1
tectona_grandis_Tg09g05770.t1	Tectona grandis	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	48.8%	54.8
PEBA_c34933_g1_i1_len_1470	Petraeovitex bambusetorium	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	24.7%	54.5
evm.model.Chr08.398	Callicarpa nudiflora	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	27.1%	54.4
evm.model.chr7.3595	Prunella vulgaris	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	28.3%	54.4
LECA_c29516_g1_i1_len_1418	Leonurus cardiaca	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	24.3%	54.3
origanum_vulgare_203564.g4.t1	Origanum vulgare	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	27.2%	54.0
origanum_vulgare_203565.g4.t1	Origanum vulgare	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	27.2%	54.0
BAPS_c26374_g1_i2_len_1393	Ballota pseudodictamnus	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	23.2%	53.9
COPY_c67989_g1_i2_len_1407	Cornutia pyramidata	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	24.7%	53.6
Clgra_007379-T1	Clinopodium gracile	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	29.9%	53.2
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_51.1486.mRNA1	Stenogyne calaminthoides	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	28.2%	53.1
CAame07G0032280.v1.94	Callicarpa americana	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	78.3%	53.0
CAame12G0016760.v1.94	Callicarpa americana	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	23.7%	53.0
PRMI_c118266_g1_i1_len_353	Premna microphylla	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	39.3%	53.0
Teucrium_chamaedrys__Tcha125991	Teucrium chamaedrys	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	58.3%	53.0
PHFR_c27711_g1_i1_len_659	Phlomis fruticosa	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	29.0%	52.7
CAame12G0016750.v1.94	Callicarpa americana	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	23.8%	52.5
MEOF_c44485_g1_i1_len_337	Melissa officinalis	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	46.0%	52.3
KAL8458351.1	Phlomoides rotata	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	26.1%	52.2
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_22.1397.mRNA1	Stenogyne calaminthoides	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	55.4%	52.2
Lj3g14760.1	Leonurus japonicus	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	27.0%	51.8
evm.model.LG03.268	Clinopodium barosmum	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	25.2%	51.5
rna-gnl\|WGS:QFCC\|chr09_44097709_44103954.mrna1	Perilla frutescens	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	24.7%	51.5
AJRE_c38155_g1_i3_len_1256	Ajuga reptans	Alkaloid · `CODM_T6ODM`	blast+hmm	Medium	23.4%	51.4