Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

3,377 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
PRMI_c37708_g1_i1_len_311	Premna microphylla	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	50.2
KAL1551452.1	Salvia divinorum	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	49.2
MODI_c58887_g1_i1_len_276	Monarda didyma	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	48.9
COTO_c37178_g1_i2_len_1538	Congea tomentosa	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	47.8
origanum_vulgare_173401.g1.t1	Origanum vulgare	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	47.6
g22197.t1	Nepeta mussinii	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	47.0
THVU_c20595_g1_i1_len_360	Thymus vulgaris	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	46.6
AGFO_c39286_g1_i1_len_311	Agastache foeniculum	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	45.5
PRMI_c82026_g1_i1_len_317	Premna microphylla	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	43.2
XP_042018826.1	Salvia splendens	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	42.9
KAL1565081.1	Salvia divinorum	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	42.5
KAL8526815.1	Phlomoides rotata	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	41.6
Clgra_007382-T1	Clinopodium gracile	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	41.0
LAAL_c8371_g1_i1_len_305	Lamium album	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	40.7
THVU_c45268_g1_i1_len_479	Thymus vulgaris	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	40.3
COPY_c83740_g1_i1_len_315	Cornutia pyramidata	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	40.0
LECA_c37691_g1_i1_len_327	Leonurus cardiaca	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	40.0
SAOF_c66258_g1_i1_len_479	Salvia officinalis	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	39.4
origanum_vulgare_112781.g1.t1	Origanum vulgare	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	39.4
evm.model.LG01.645	Clinopodium barosmum	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	38.7
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_28.1584.mRNA1	Stenogyne calaminthoides	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	37.7
PRMI_c134855_g1_i1_len_252	Premna microphylla	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	37.3
evm.model.LG22.724	Clinopodium barosmum	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	37.2
COCA_c3132_g1_i1_len_471	Collinsonia canadensis	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	36.9
MESP_c53659_g1_i1_len_323	Mentha spicata	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	36.5
MEOF_c43772_g1_i1_len_379	Melissa officinalis	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	36.4
Sbow05G0037720.1	Salvia bowleyana	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	36.0
Sch000026932	Schizonepeta tenuifolia	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	35.9
tectona_grandis_Tg14g11500.t1	Tectona grandis	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	35.8
HYSU_c14218_g1_i2_len_347	Hyptis suaveolens	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	35.7
LELE_c43995_g1_i1_len_323	Leonotis leonurus	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	34.7
PRLA_c101873_g1_i1_len_273	Prostanthera lasianthos	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	34.6
evm.model.LG14.802	Clinopodium barosmum	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	34.6
PRMI_c89374_g1_i1_len_318	Premna microphylla	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	34.5
23:ILLG1G152.13m1	Isodon lophanthoides	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	34.4
COPY_c8632_g1_i2_len_348	Cornutia pyramidata	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	34.4
g8964.t1.1.5b2d4a2e	Nepeta cataria	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	34.0
ORMA_c59358_g1_i1_len_524	Origanum majorana	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	33.9
evm.model.chr10.1155	Prunella vulgaris	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	33.7
LAAN_c29041_g1_i4_len_1167	Lavandula angustifolia	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	33.6
COPY_c21283_g1_i1_len_321	Cornutia pyramidata	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	33.3
PHFR_c22223_g1_i1_len_493	Phlomis fruticosa	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	33.3
PRLA_c55778_g1_i1_len_474	Prostanthera lasianthos	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	33.2
LYAM_c16843_g1_i1_len_384	Lycopus americanus	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	33.1
PHFR_c53933_g1_i1_len_696	Phlomis fruticosa	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	33.0
evm.model.ptg000002l.947	Isodon serra	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	32.2
BAPS_c25246_g1_i2_len_603	Ballota pseudodictamnus	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	31.9
MACO_g11944.t1	Marmoritis complanata	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	31.9
evm.model.chr10.1154	Prunella vulgaris	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	31.7
CAame12G0014070.v1.94	Callicarpa americana	Alkaloid · `CODM_T6ODM`	hmm	Medium	—	31.6