Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

3,793 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
PHFR_c61031_g2_i2_len_436	Phlomis fruticosa	Flavonoid · `DFR`	hmm	Medium	—	86.9
AG34_scaffold9_10920T	Agastache rugosa	Flavonoid · `DFR`	hmm	Medium	—	86.6
MEOF_c17234_g1_i1_len_489	Melissa officinalis	Flavonoid · `DFR`	hmm	Medium	—	86.6
Pat_A02G028300.m1	Pogostemon cablin	Flavonoid · `DFR`	hmm	Medium	—	86.6
CAame09G0019150.v1.94	Callicarpa americana	Flavonoid · `DFR`	hmm	Medium	—	84.7
MACO_g8503.t1	Marmoritis complanata	Flavonoid · `DFR`	hmm	Medium	—	84.7
MACO_g8507.t1	Marmoritis complanata	Flavonoid · `DFR`	hmm	Medium	—	84.7
PEAT_c29891_g1_i1_len_2092	Perovskia atriplicifolia	Flavonoid · `DFR`	hmm	Medium	—	84.1
g50833.t1	Nepeta cataria	Flavonoid · `DFR`	hmm	Medium	—	83.1
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_8.331.mRNA1	Stenogyne calaminthoides	Flavonoid · `DFR`	hmm	Medium	—	83.0
981.g16.t1	Ocimum basilicum	Flavonoid · `DFR`	hmm	Medium	—	82.8
PHFR_c64107_g1_i2_len_1811	Phlomis fruticosa	Flavonoid · `DFR`	hmm	Medium	—	82.8
MEOF_c32585_g1_i1_len_377	Melissa officinalis	Flavonoid · `DFR`	hmm	Medium	—	82.0
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_13.976.mRNA1	Stenogyne calaminthoides	Flavonoid · `DFR`	hmm	Medium	—	81.8
Sbai6A306T135.1	Scutellaria baicalensis	Flavonoid · `DFR`	hmm	Medium	—	81.6
Pat_B10G112200.m1	Pogostemon cablin	Flavonoid · `DFR`	hmm	Medium	—	80.2
GWHPBJVA010951	Thymus quinquecostatus	Flavonoid · `DFR`	hmm	Medium	—	78.0
383637.g25.t1	Ocimum basilicum	Flavonoid · `DFR`	hmm	Medium	—	76.6
COPY_c128048_g1_i1_len_439	Cornutia pyramidata	Flavonoid · `DFR`	hmm	Medium	—	76.6
Ms_c001g01262.1	Mosla soochowensis	Flavonoid · `DFR`	hmm	Medium	—	76.1
Clgra_001443-T1	Clinopodium gracile	Flavonoid · `DFR`	hmm	Medium	—	75.9
SAOF_c29274_g1_i1_len_1108	Salvia officinalis	Flavonoid · `DFR`	hmm	Medium	—	75.9
553.g13.t1	Ocimum basilicum	Flavonoid · `DFR`	hmm	Medium	—	75.8
AGFO_c19800_g1_i2_len_1681	Agastache foeniculum	Flavonoid · `DFR`	hmm	Medium	—	75.8
KAL8523346.1	Phlomoides rotata	Flavonoid · `DFR`	hmm	Medium	—	75.3
THVU_c75368_g3_i3_len_1708	Thymus vulgaris	Flavonoid · `DFR`	hmm	Medium	—	75.3
HYSU_c56902_g1_i1_len_330	Hyptis suaveolens	Flavonoid · `DFR`	hmm	Medium	—	74.6
30:ILLG11G257.14m1	Isodon lophanthoides	Flavonoid · `DFR`	hmm	Medium	—	74.2
evm.model.ptg000004l.978	Isodon serra	Flavonoid · `DFR`	hmm	Medium	—	74.2
Mc3g11040.1	Mosla chinensis	Flavonoid · `DFR`	hmm	Medium	—	73.8
rna-gnl\|WGS:QFCC\|chr05_58657472_58660681.mrna1	Perilla frutescens	Flavonoid · `DFR`	hmm	Medium	—	73.7
rna-gnl\|WGS:QIYW\|chr02_08507875_08511084.mrna1	Perilla citriodora	Flavonoid · `DFR`	hmm	Medium	—	73.7
rna-gnl\|WGS:QIYW\|chr02_08507875_08511084.mrna1	Perilla frutescens var. hirtella	Flavonoid · `DFR`	hmm	Medium	—	73.7
KAL1546982.1	Salvia divinorum	Flavonoid · `DFR`	hmm	Medium	—	73.5
CLBU_c51035_g1_i3_len_1390	Clerodendrum bungei	Flavonoid · `DFR`	hmm	Medium	—	73.4
Sbow04G0005790.1	Salvia bowleyana	Flavonoid · `DFR`	hmm	Medium	—	73.4
evm.model.LG07.206	Clinopodium barosmum	Flavonoid · `DFR`	hmm	Medium	—	73.2
MODI_c38728_g1_i2_len_1644	Monarda didyma	Flavonoid · `DFR`	hmm	Medium	—	73.1
rna-gnl\|WGS:QFCC\|chr08_24442284_24449130.mrna1	Perilla frutescens	Flavonoid · `DFR`	hmm	Medium	—	73.1
rna-gnl\|WGS:QIYW\|chr04_37896636_37903484.mrna1	Perilla citriodora	Flavonoid · `DFR`	hmm	Medium	—	73.1
rna-gnl\|WGS:QIYW\|chr04_37896636_37903484.mrna1	Perilla frutescens var. hirtella	Flavonoid · `DFR`	hmm	Medium	—	73.1
origanum_vulgare_127074.g10.t1	Origanum vulgare	Flavonoid · `DFR`	hmm	Medium	—	73.0
g785.t1	Salvia sclarea	Flavonoid · `DFR`	hmm	Medium	—	72.9
Smil05G0028830.1.v1.484	Salvia miltiorrhiza	Flavonoid · `DFR`	hmm	Medium	—	72.5
PRLA_c68121_g1_i1_len_1687	Prostanthera lasianthos	Flavonoid · `DFR`	hmm	Medium	—	72.4
evm.model.chr5.1678	Prunella vulgaris	Flavonoid · `DFR`	hmm	Medium	—	72.2
VIAG_c40593_g2_i1_len_1777	Vitex agnus-castus	Flavonoid · `DFR`	hmm	Medium	—	72.0
9:ILLG8G281.77m1	Isodon lophanthoides	Flavonoid · `DFR`	hmm	Medium	—	71.8
evm.model.ptg000006l.330	Isodon serra	Flavonoid · `DFR`	hmm	Medium	—	71.8
g36888.t2	Hyssopus officinalis	Flavonoid · `DFR`	hmm	Medium	—	71.8