Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

1,274 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
origanum_vulgare_423.g28.t1	Origanum vulgare	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	41.8%	54.3
1949.g120.t1	Ocimum basilicum	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	74.0%	54.2
tectona_grandis_Tg19g02150.t1	Tectona grandis	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	28.7%	53.3
tectona_grandis_Tg04g14930.t1	Tectona grandis	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	55.1%	51.7
HYSU_c23654_g1_i1_len_648	Hyptis suaveolens	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	65.8%	50.5
tectona_grandis_Tg17g06590.t1	Tectona grandis	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	43.1%	50.3
COPY_c69779_g1_i1_len_569	Cornutia pyramidata	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	26.4%	50.0
Pat_B07G112400.m1	Pogostemon cablin	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	67.2%	49.8
Pat_A20G040500.m1	Pogostemon cablin	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	38.2%	49.1
MEOF_c23279_g1_i1_len_331	Melissa officinalis	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	28.8%	49.0
HOSA_c3760_g1_i1_len_289	Holmskioldia sanguinea	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	27.8%	48.1
evm.model.Chr05.912	Callicarpa nudiflora	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	28.7%	48.0
tectona_grandis_TgUn001g00480.t1	Tectona grandis	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	28.7%	47.8
g26897.t1	Nepeta cataria	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	70.6%	47.4
ocimum_sanctum_Ote100125260011	Ocimum tenuiflorum	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	44.2%	47.0
COTO_c46898_g1_i1_len_394	Congea tomentosa	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	67.6%	46.6
KAL8487576.1	Phlomoides rotata	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	40.0%	46.0
origanum_vulgare_354.g1.t1	Origanum vulgare	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	40.4%	45.9
Pat_B26G119400.m1	Pogostemon cablin	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	31.1%	45.6
Pat_B28G006800.m1	Pogostemon cablin	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	50.7%	43.3
KAL8490260.1	Phlomoides rotata	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	56.4%	42.8
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_47.419.mRNA1	Stenogyne calaminthoides	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	42.9%	42.7
Clgra_028722-T1	Clinopodium gracile	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	47.2%	42.3
Teum.10G004720.1	Teucrium marum	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	45.5%	42.0
KAL8502104.1	Phlomoides rotata	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	55.6%	41.6
ocimum_sanctum_Ote100137780011	Ocimum tenuiflorum	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	41.7%	41.3
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_51.1733.mRNA1	Stenogyne calaminthoides	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	63.2%	40.1
23:ILLG1G205.4m1	Isodon lophanthoides	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	41.0%	38.6
Sbow01G0044960.1	Salvia bowleyana	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	36.9%	35.2
Ls9g10940.1	Leonurus sibiricus	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	27.5%	33.9
KAL8503331.1	Phlomoides rotata	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	46.9%	33.1
Lj8g11310.1	Leonurus japonicus	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	59.7%	32.5
tectona_grandis_Tg09g11410.t1	Tectona grandis	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	71.9%	30.3
CAame08G0040120.v1.94	Callicarpa americana	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	43.5%	30.0
GLHE_c40229_g1_i2_len_295	Glechoma hederacea	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	55.9%	30.0
457.g75.t1	Ocimum basilicum	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	47.2%	29.5
Sbow06G0035310.1	Salvia bowleyana	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	64.7%	29.0
PHFR_c51700_g1_i1_len_534	Phlomis fruticosa	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	25.8%	28.5
385229.g36.t1	Ocimum basilicum	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	45.3%	27.0
origanum_vulgare_114325.g2.t1	Origanum vulgare	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	38.0%	26.2
Pat_B01G208200.m1	Pogostemon cablin	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	24.8%	24.6
Pat_B20G088100.m1	Pogostemon cablin	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	56.1%	22.7
g1118.t1	Hyssopus officinalis	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	48.8%	22.4
evm.model.LG06.828	Clinopodium barosmum	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	41.7%	21.1
evm.model.LG03.132	Clinopodium barosmum	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	77.3%	16.2
Clgra_038428-T1	Clinopodium gracile	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	54.3%	15.1
evm.model.chr11.2098	Prunella vulgaris	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	73.7%	15.0
origanum_vulgare_121655.g3.t1	Origanum vulgare	Phenylpropanoid · `F5H_CYP84A`	blast+hmm	Medium	46.2%	14.5
AG34_scaffold1_20200T	Agastache rugosa	Phenylpropanoid · `F5H_CYP84A`	blast	Medium	40.5%	—
AGFO_c41512_g1_i1_len_279	Agastache foeniculum	Phenylpropanoid · `F5H_CYP84A`	blast	Medium	32.9%	—