Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

204 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
Mlonscaffold_2_length_455260290061920.1	Mentha longifolia	Alkaloid · `LAMT`	blast+hmm	Medium	42.7%	30.3
Mlonscaffold_2_length_455260290061790.1	Mentha longifolia	Alkaloid · `LAMT`	blast+hmm	Medium	43.4%	30.2
PEAT_c40866_g1_i1_len_975	Perovskia atriplicifolia	Alkaloid · `LAMT`	blast+hmm	Medium	54.5%	29.0
ocimum_basilicum_383214.g83.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast+hmm	Medium	42.0%	28.5
salvia_rosmarinus_266951.g1.t1	Salvia rosmarinus	Alkaloid · `LAMT`	blast+hmm	Medium	49.5%	28.5
ocimum_basilicum_1886.g131.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast+hmm	Medium	37.7%	27.2
tectona_grandis_Tg01g12970.t1	Tectona grandis	Alkaloid · `LAMT`	blast+hmm	Medium	55.7%	25.9
origanum_vulgare_206624.g6.t1	Origanum vulgare	Alkaloid · `LAMT`	blast+hmm	Medium	42.8%	25.5
origanum_vulgare_206627.g6.t1	Origanum vulgare	Alkaloid · `LAMT`	blast+hmm	Medium	42.2%	25.5
ORMA_c41258_g2_i1_len_749	Origanum majorana	Alkaloid · `LAMT`	blast+hmm	Medium	52.3%	24.5
ocimum_basilicum_560.g44.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast+hmm	Medium	41.2%	24.5
LECA_c72240_g1_i1_len_273	Leonurus cardiaca	Alkaloid · `LAMT`	blast+hmm	Medium	57.7%	21.8
tectona_grandis_Tg15g14180.t1	Tectona grandis	Alkaloid · `LAMT`	blast+hmm	Medium	38.8%	19.6
Mlonscaffold_1_length_466995370056350.1.v1.326	Mentha longifolia	Alkaloid · `LAMT`	blast+hmm	Medium	56.7%	19.0
Pcabscaffold_8861051640.1	Pogostemon cablin	Alkaloid · `LAMT`	blast+hmm	Medium	34.7%	16.9
PRMI_c44093_g2_i1_len_450	Premna microphylla	Alkaloid · `LAMT`	blast+hmm	Medium	88.2%	16.6
tectona_grandis_Tg10g07210.t1	Tectona grandis	Alkaloid · `LAMT`	blast+hmm	Medium	54.4%	15.0
ocimum_basilicum_382674.g3.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast+hmm	Medium	44.6%	14.5
ocimum_basilicum_1913.g87.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast+hmm	Medium	45.1%	13.8
nepeta_cataria_g40710.t1	Nepeta cataria	Alkaloid · `LAMT`	blast+hmm	Medium	47.3%	13.0
ocimum_basilicum_385620.g30.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast+hmm	Medium	45.5%	12.1
Pcabscaffold_6780932130.1	Pogostemon cablin	Alkaloid · `LAMT`	blast+hmm	Medium	54.1%	11.9
ocimum_basilicum_385488.g47.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast+hmm	Medium	42.4%	9.5
ocimum_basilicum_560.g32.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast+hmm	Medium	40.8%	7.3
CLBU_c22235_g1_i1_len_676	Clerodendrum bungei	Alkaloid · `LAMT`	blast	Medium	50.0%	—
COCA_c16976_g1_i1_len_306	Collinsonia canadensis	Alkaloid · `LAMT`	blast	Medium	48.5%	—
PRLA_c24012_g1_i1_len_346	Prostanthera lasianthos	Alkaloid · `LAMT`	blast	Medium	48.5%	—
STOF_c141136_g1_i1_len_392	Stachys officinalis	Alkaloid · `LAMT`	blast	Medium	51.5%	—
TECA_c17438_g1_i1_len_388	Teucrium canadense	Alkaloid · `LAMT`	blast	Medium	52.9%	—
nepeta_cataria_g14242.t1	Nepeta cataria	Alkaloid · `LAMT`	blast	Medium	39.6%	—
nepeta_cataria_g25473.t1	Nepeta cataria	Alkaloid · `LAMT`	blast	Medium	31.2%	—
ocimum_basilicum_1670.g2.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast	Medium	35.0%	—
ocimum_basilicum_560.g33.t1	Ocimum basilicum	Alkaloid · `LAMT`	blast	Medium	32.9%	—
origanum_vulgare_1031.g45.t1	Origanum vulgare	Alkaloid · `LAMT`	blast	Medium	31.6%	—
origanum_vulgare_324.g18.t1	Origanum vulgare	Alkaloid · `LAMT`	blast	Medium	35.7%	—
THVU_c35150_g1_i1_len_346	Thymus vulgaris	Alkaloid · `LAMT`	hmm	Medium	—	66.7
KAL8524881.1	Phlomoides rotata	Alkaloid · `LAMT`	hmm	Medium	—	43.1
HYSU_c88148_g1_i1_len_274	Hyptis suaveolens	Alkaloid · `LAMT`	hmm	Medium	—	38.8
KAL1531899.1	Salvia divinorum	Alkaloid · `LAMT`	hmm	Medium	—	37.8
MESP_c74834_g1_i1_len_350	Mentha spicata	Alkaloid · `LAMT`	hmm	Medium	—	33.6
DRSE_g13131.t1	Drepanocaryum sewerzowii	Alkaloid · `LAMT`	hmm	Medium	—	32.8
PEBA_c14792_g1_i1_len_492	Petraeovitex bambusetorium	Alkaloid · `LAMT`	hmm	Medium	—	32.4
evm.model.LG13.1216	Clinopodium barosmum	Alkaloid · `LAMT`	hmm	Medium	—	28.2
STOF_c67057_g1_i1_len_1560	Stachys officinalis	Alkaloid · `LAMT`	hmm	Medium	—	27.1
MEPI_c112194_g1_i1_len_293	Mentha x piperita	Alkaloid · `LAMT`	hmm	Medium	—	25.9
ocimum_sanctum_Ote100122740081	Ocimum tenuiflorum	Alkaloid · `LAMT`	hmm	Medium	—	24.6
Clgra_019613-T1	Clinopodium gracile	Alkaloid · `LAMT`	hmm	Medium	—	24.4
3:ILLG6G173.22m1	Isodon lophanthoides	Alkaloid · `LAMT`	hmm	Medium	—	20.4
evm.model.ptg000019l.11	Isodon serra	Alkaloid · `LAMT`	hmm	Medium	—	20.4
evm.model.ptg000019l.3	Isodon serra	Alkaloid · `LAMT`	hmm	Medium	—	20.4