Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download records Evidence definitions

All candidates: 173,329
Gene-tree candidates: 238
Motif candidates: 1,287
High confidence: 67
Public species: 80
Stable modules: 105

Candidate catalogue

1,778 matching records

CSV

Candidate ID	Species	Pathway / family	Evidence	Confidence	Identity	HMM score
evm.model.LG03.2124	Clinopodium barosmum	Alkaloid · `PYKS`	blast+hmm	High	48.6%	134.7
COPY_c85201_g1_i1_len_258	Cornutia pyramidata	Alkaloid · `PYKS`	blast+hmm	High	67.4%	134.6
AJRE_c52991_g1_i1_len_258	Ajuga reptans	Alkaloid · `PYKS`	blast+hmm	High	64.7%	131.0
Pat_A20G035400.m1	Pogostemon cablin	Alkaloid · `PYKS`	blast+hmm	High	50.0%	130.3
MEOF_c58156_g1_i1_len_462	Melissa officinalis	Alkaloid · `PYKS`	blast+hmm	High	70.1%	129.9
COCA_c162848_g1_i1_len_262	Collinsonia canadensis	Alkaloid · `PYKS`	blast+hmm	High	60.9%	127.8
Ls6g21000.1	Leonurus sibiricus	Alkaloid · `PYKS`	blast+hmm	High	64.8%	125.2
PEAT_c35998_g1_i1_len_438	Perovskia atriplicifolia	Alkaloid · `PYKS`	blast+hmm	High	71.3%	124.0
ORMA_c151322_g1_i1_len_334	Origanum majorana	Alkaloid · `PYKS`	blast+hmm	High	56.3%	123.8
GLHE_c127366_g1_i1_len_273	Glechoma hederacea	Alkaloid · `PYKS`	blast+hmm	High	63.3%	122.5
HYSU_c41263_g1_i1_len_492	Hyptis suaveolens	Alkaloid · `PYKS`	blast+hmm	High	38.1%	121.4
Roff10250025930	Salvia rosmarinus	Alkaloid · `PYKS`	blast+hmm	High	34.2%	117.8
PEAT_c75109_g1_i1_len_268	Perovskia atriplicifolia	Alkaloid · `PYKS`	blast+hmm	High	65.2%	116.9
MEPI_c73132_g1_i1_len_363	Mentha x piperita	Alkaloid · `PYKS`	blast+hmm	High	55.9%	114.2
ORMA_c94298_g1_i1_len_251	Origanum majorana	Alkaloid · `PYKS`	blast+hmm	High	68.7%	113.3
GWHPBJVA024680	Thymus quinquecostatus	Alkaloid · `PYKS`	blast+hmm	High	49.2%	113.1
g24673.t1	Nepeta cataria	Alkaloid · `PYKS`	blast+hmm	High	46.3%	112.9
LECA_c45758_g1_i1_len_257	Leonurus cardiaca	Alkaloid · `PYKS`	blast+hmm	High	64.0%	112.6
COCA_c17976_g1_i1_len_330	Collinsonia canadensis	Alkaloid · `PYKS`	blast+hmm	High	68.0%	110.3
HYSU_c56213_g1_i1_len_427	Hyptis suaveolens	Alkaloid · `PYKS`	blast+hmm	High	39.4%	110.2
GLHE_c106546_g1_i1_len_297	Glechoma hederacea	Alkaloid · `PYKS`	blast+hmm	High	53.1%	108.2
THVU_c125451_g1_i1_len_254	Thymus vulgaris	Alkaloid · `PYKS`	blast+hmm	High	65.5%	106.8
PHFR_c57801_g3_i1_len_301	Phlomis fruticosa	Alkaloid · `PYKS`	blast+hmm	High	67.1%	106.7
g37277.t1	Hyssopus officinalis	Alkaloid · `PYKS`	blast+hmm	High	30.0%	105.7
g9061.t1	Salvia sclarea	Alkaloid · `PYKS`	blast+hmm	High	47.3%	105.2
KAL8486825.1	Phlomoides rotata	Alkaloid · `PYKS`	blast+hmm	High	60.9%	105.0
AGFO_c41014_g1_i1_len_293	Agastache foeniculum	Alkaloid · `PYKS`	blast+hmm	High	68.7%	103.6
origanum_vulgare_126120.g6.t1	Origanum vulgare	Alkaloid · `PYKS`	blast+hmm	High	61.7%	99.5
ocimum_sanctum_Ote100190890031	Ocimum tenuiflorum	Alkaloid · `PYKS`	blast+hmm	High	50.9%	95.9
GLHE_c38444_g1_i1_len_418	Glechoma hederacea	Alkaloid · `PYKS`	blast+hmm	High	44.6%	95.1
STOF_c56173_g2_i1_len_1062	Stachys officinalis	Alkaloid · `PYKS`	blast+hmm	High	54.5%	89.6
KAL8486826.1	Phlomoides rotata	Alkaloid · `PYKS`	blast+hmm	High	63.8%	89.4
PRMI_c6803_g1_i1_len_305	Premna microphylla	Alkaloid · `PYKS`	blast+hmm	High	66.1%	88.2
VIAG_c34669_g1_i1_len_437	Vitex agnus-castus	Alkaloid · `PYKS`	blast+hmm	High	74.6%	88.2
Clgra_025485-T1	Clinopodium gracile	Alkaloid · `PYKS`	blast+hmm	High	37.0%	87.9
THVU_c43300_g1_i1_len_561	Thymus vulgaris	Alkaloid · `PYKS`	blast+hmm	High	39.1%	85.9
evm.model.Chr02.2164	Callicarpa nudiflora	Alkaloid · `PYKS`	blast+hmm	High	34.7%	82.2
ocimum_sanctum_Ote100022180051	Ocimum tenuiflorum	Alkaloid · `PYKS`	blast+hmm	High	54.2%	81.6
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_47.416.mRNA1	Stenogyne calaminthoides	Alkaloid · `PYKS`	blast+hmm	High	61.0%	78.3
PHFR_c144950_g1_i1_len_280	Phlomis fruticosa	Alkaloid · `PYKS`	blast+hmm	High	45.1%	78.1
LELE_c10260_g1_i1_len_321	Leonotis leonurus	Alkaloid · `PYKS`	blast+hmm	High	39.6%	78.0
origanum_vulgare_126120.g4.t1	Origanum vulgare	Alkaloid · `PYKS`	blast+hmm	High	64.9%	76.9
DRSE_g20598.t1	Drepanocaryum sewerzowii	Alkaloid · `PYKS`	blast+hmm	High	60.0%	76.3
KAL1562478.1	Salvia divinorum	Alkaloid · `PYKS`	blast+hmm	High	48.2%	75.7
GlLon_005111-T1	Glechoma longituba	Alkaloid · `PYKS`	blast+hmm	High	42.2%	75.4
Clgra_009436-T1	Clinopodium gracile	Alkaloid · `PYKS`	blast+hmm	High	67.3%	75.1
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_47.482.mRNA1	Stenogyne calaminthoides	Alkaloid · `PYKS`	blast+hmm	High	69.6%	75.1
Sbow06G0045510.1	Salvia bowleyana	Alkaloid · `PYKS`	blast+hmm	High	51.4%	73.7
g28869.t1	Nepeta mussinii	Alkaloid · `PYKS`	blast+hmm	High	45.3%	73.7
ORMA_c58286_g1_i1_len_256	Origanum majorana	Alkaloid · `PYKS`	blast+hmm	High	56.7%	71.4