LamiOmicsDB Lamiaceae Multi-Omics Database
v1 808 species · 3 phylogenies · 6,313 sequences

Traceable computational records

Pathway candidate records

Search 173,329 species-linked candidate identifiers. Confidence and evidence mode are preserved separately; no candidate is presented as biochemically validated.

Download recordsEvidence definitions
All candidates
173,329
Gene-tree candidates
238
Motif candidates
1,287
High confidence
67
Public species
80
Stable modules
105

Candidate catalogue

1,778 matching records

CSV
Candidate IDSpeciesPathway / familyEvidenceConfidenceIdentityHMM score
385708.g14.t1
Ocimum basilicumAlkaloid · PYKSblast+hmm High 38.9%275.2
THVU_c60456_g1_i2_len_1073
Thymus vulgarisAlkaloid · PYKSblast+hmm High 40.5%274.3
Sbow06G0045520.1
Salvia bowleyanaAlkaloid · PYKSblast+hmm High 49.9%274.0
PHFR_c57801_g2_i1_len_557
Phlomis fruticosaAlkaloid · PYKSblast+hmm High 68.9%270.6
PEAT_c35998_g2_i1_len_621
Perovskia atriplicifoliaAlkaloid · PYKSblast+hmm High 65.1%270.3
tectona_grandis_Tg08g04850.t1
Tectona grandisAlkaloid · PYKSblast+hmm High 61.5%269.3
PLBA_c79382_g1_i1_len_570
Plectranthus barbatusAlkaloid · PYKSblast+hmm High 61.6%267.4
Pat_B07G030000.m1
Pogostemon cablinAlkaloid · PYKSblast+hmm High 38.6%265.2
AGFO_c7638_g1_i1_len_514
Agastache foeniculumAlkaloid · PYKSblast+hmm High 67.1%264.2
Smil00G0041710.1.v1.484
Salvia miltiorrhizaAlkaloid · PYKSblast+hmm High 38.6%263.7
LAAN_c23291_g1_i1_len_1775
Lavandula angustifoliaAlkaloid · PYKSblast+hmm High 41.5%262.4
ocimum_sanctum_Ote100192720051
Ocimum tenuiflorumAlkaloid · PYKSblast+hmm High 36.8%259.1
evm.model.ptg000001l.871
Isodon serraAlkaloid · PYKSblast+hmm High 39.9%257.0
Ls5g22140.1
Leonurus sibiricusAlkaloid · PYKSblast+hmm High 36.3%256.9
Sch000028167
Schizonepeta tenuifoliaAlkaloid · PYKSblast+hmm High 36.1%255.0
WEFR_c29812_g1_i1_len_997
Westringia fruticosaAlkaloid · PYKSblast+hmm High 39.9%253.7
MODI_c22107_g1_i1_len_729
Monarda didymaAlkaloid · PYKSblast+hmm High 55.0%253.4
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_47.480.mRNA1
Stenogyne calaminthoidesAlkaloid · PYKSblast+hmm High 58.0%252.4
Sch000000382
Schizonepeta tenuifoliaAlkaloid · PYKSblast+hmm High 60.7%250.6
Sbow03G0004040.1
Salvia bowleyanaAlkaloid · PYKSblast+hmm High 40.4%249.3
ORMA_c44195_g1_i2_len_1277
Origanum majoranaAlkaloid · PYKSblast+hmm High 41.5%248.5
MODI_c15610_g1_i1_len_605
Monarda didymaAlkaloid · PYKSblast+hmm High 63.4%247.6
Stenogyne_calaminthoides__EVM_prediction_HiC_scaffold_47.478.mRNA1
Stenogyne calaminthoidesAlkaloid · PYKSblast+hmm High 57.0%246.9
COCA_c16317_g1_i1_len_598
Collinsonia canadensisAlkaloid · PYKSblast+hmm High 63.9%245.8
MEOF_c27694_g1_i1_len_610
Melissa officinalisAlkaloid · PYKSblast+hmm High 64.4%244.6
Pat_A19G036500.m1
Pogostemon cablinAlkaloid · PYKSblast+hmm High 54.1%244.4
g14042.t1.1.5b2c7c80
Nepeta mussiniiAlkaloid · PYKSblast+hmm High 40.6%242.1
g38037.t1.1.5b2d4a30
Nepeta catariaAlkaloid · PYKSblast+hmm High 40.6%241.8
STOF_c15958_g1_i1_len_2255
Stachys officinalisAlkaloid · PYKSblast+hmm High 39.7%240.8
CAame06G0044390.v1.94
Callicarpa americanaAlkaloid · PYKSblast+hmm High 42.3%239.6
Lj7g14300.1
Leonurus japonicusAlkaloid · PYKSblast+hmm High 36.0%238.9
HOSA_c32974_g1_i1_len_524
Holmskioldia sanguineaAlkaloid · PYKSblast+hmm High 69.0%237.9
PHFR_c74163_g1_i5_len_2348
Phlomis fruticosaAlkaloid · PYKSblast+hmm High 38.9%236.9
Pat_B20G037500.m1
Pogostemon cablinAlkaloid · PYKSblast+hmm High 55.8%236.5
Pat_A19G036000.m1
Pogostemon cablinAlkaloid · PYKSblast+hmm High 53.4%235.4
ROMY_c37953_g1_i2_len_503
Rotheca myricoidesAlkaloid · PYKSblast+hmm High 59.4%233.4
Pat_B19G040000.m1
Pogostemon cablinAlkaloid · PYKSblast+hmm High 56.6%230.2
PLBA_c80679_g1_i1_len_597
Plectranthus barbatusAlkaloid · PYKSblast+hmm High 61.5%223.8
LECA_c77888_g1_i1_len_907
Leonurus cardiacaAlkaloid · PYKSblast+hmm High 38.4%222.8
COCA_c25305_g1_i1_len_498
Collinsonia canadensisAlkaloid · PYKSblast+hmm High 60.8%222.5
COCA_c33073_g1_i1_len_711
Collinsonia canadensisAlkaloid · PYKSblast+hmm High 54.5%221.9
rna-gnl|WGS:QIYW|chr05_22018532_22019326.mrna1
Perilla citriodoraAlkaloid · PYKSblast+hmm High 40.0%221.3
rna-gnl|WGS:QIYW|chr05_22018532_22019326.mrna1
Perilla frutescens var. hirtellaAlkaloid · PYKSblast+hmm High 40.0%221.3
VIAG_c34684_g2_i1_len_457
Vitex agnus-castusAlkaloid · PYKSblast+hmm High 63.6%218.6
SAOF_c3046_g1_i1_len_525
Salvia officinalisAlkaloid · PYKSblast+hmm High 60.1%218.5
GlLon_026085-T1
Glechoma longitubaAlkaloid · PYKSblast+hmm High 43.1%215.2
Mlonscaffold_1_length_466995370042420.1.v1.326
Mentha longifoliaAlkaloid · PYKSblast+hmm High 60.0%215.2
GMPH_c28982_g1_i1_len_499
Gmelina philippensisAlkaloid · PYKSblast+hmm High 65.0%214.1
MEOF_c29431_g1_i1_len_452
Melissa officinalisAlkaloid · PYKSblast+hmm High 62.4%213.7
evm.model.LG10.808
Clinopodium barosmumAlkaloid · PYKSblast+hmm High 51.2%211.7